NO14G02390, NO14G02390 (gene) Nannochloropsis oceanica

Overview
NameNO14G02390
Unique NameNO14G02390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2864
Alignment locationchr14:709173..712036 -

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Properties
Property NameValue
DescriptionE3 ubiquitin-protein ligase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:709173..712036 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO14G02390 vs. NCBI_GenBank
Match: EWM24570.1 (e3 ubiquitin-protein ligase [Nannochloropsis gaditana])

HSP 1 Score: 377.5 bits (968), Expect = 6.400e-101
Identity = 211/308 (68.51%), Postives = 228/308 (74.03%), Query Frame = 0
Query:  164 MFLYVSSVSALYYLNGRGPNVSVSGSLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAPDEDVRLLPCEHYFHASCVDEWLKVNASCPTCRASILPEHADQSTPRSSHYGTTTSAXXXXXXXXXXXXXXXXXXXXLGGN---LPVAISPPSSISPSGSIPM-PGTPMHGG 468
            MFLYVSSVSALY LNGR P    +  LMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVE+CPHPNRSP+YSLCVAFVFINYAQLCLPCVVVI+MLPVL XXXXXXXRILARIQDPMRGKGATP+MI+KLP+MKYRQ+Q E+  T +A                       EQ  Q+SVTGVESNSTSCA+CISEYAPDEDVRLLPC HYFHASCVDEWLKVNASCPTCRASILPE A+Q TPRSSHYGTT++                       G     P+  SP S  S S +IP  PGTP  GG
Sbjct:    1 MFLYVSSVSALYRLNGRMP---ATTRLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSPVYSLCVAFVFINYAQLCLPCVVVIIMLPVLCXXXXXXXRILARIQDPMRGKGATPSMINKLPMMKYRQIQAEKAATASAGSLEGQAAPPASQGG--------EQDTQVSVTGVESNSTSCAVCISEYAPDEDVRLLPCAHYFHASCVDEWLKVNASCPTCRASILPESAEQPTPRSSHYGTTSAGVLGSSASTSLSGGSTGNSPGGAGQGTIHPLTTSPLS--SASSAIPTHPGTPHRGG 295          
BLAST of NO14G02390 vs. NCBI_GenBank
Match: XP_005855177.1 (hypothetical protein NGA_0133600 [Nannochloropsis gaditana CCMP526] >EKU21180.1 hypothetical protein NGA_0133600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 340.9 bits (873), Expect = 6.600e-90
Identity = 182/242 (75.21%), Postives = 200/242 (82.64%), Query Frame = 0
Query:  119 CIVLLVNIPQIIAAIVILSKYWYDDTCVATETAKWKTYALIAAMRMFLYVSSVSALYYLNGRGPNVSVSGSLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAP 361
            C+VL+VNIPQIIAA+VILSKYW+D TC  +ET KWKTYALIAA+RMFLYVSSVSALY LNGR P    +  LMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVE+CPHPNRSP+YSLCVAFVFINYAQLCLPCVVVI+MLPVL XXXXXXXRILARIQDPMRGKGATP+MI+KLP+MKYRQ+Q E+  T +A                       EQ  Q+SVTGVESNSTSCA+CISEYAP
Sbjct:   32 CVVLVVNIPQIIAAVVILSKYWHDTTCEPSETTKWKTYALIAALRMFLYVSSVSALYRLNGRMP---ATTRLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSPVYSLCVAFVFINYAQLCLPCVVVIIMLPVLCXXXXXXXRILARIQDPMRGKGATPSMINKLPMMKYRQIQAEKAATASAGSLEGQAAPPASQGG--------EQDTQVSVTGVESNSTSCAVCISEYAP 262          
BLAST of NO14G02390 vs. NCBI_GenBank
Match: EWM24571.1 (e3 ubiquitin-protein ligase [Nannochloropsis gaditana])

HSP 1 Score: 338.6 bits (867), Expect = 3.300e-89
Identity = 211/398 (53.02%), Postives = 228/398 (57.29%), Query Frame = 0
Query:  164 MFLYVSSVSALYYLNGRGPNVSVSGSLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAPDEDVRLLPCEHYFHAS------------------------------------------------------------------------------------------CVDEWLKVNASCPTCRASILPEHADQSTPRSSHYGTTTSAXXXXXXXXXXXXXXXXXXXXLGGN---LPVAISPPSSISPSGSIPM-PGTPMHGG 468
            MFLYVSSVSALY LNGR P    +  LMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVE+CPHPNRSP+YSLCVAFVFINYAQLCLPCVVVI+MLPVL XXXXXXXRILARIQDPMRGKGATP+MI+KLP+MKYRQ+Q E+  T +A                       EQ  Q+SVTGVESNSTSCA+CISEYAPDEDVRLLPC HYFHAS                                                                                          CVDEWLKVNASCPTCRASILPE A+Q TPRSSHYGTT++                       G     P+  SP S  S S +IP  PGTP  GG
Sbjct:    1 MFLYVSSVSALYRLNGRMP---ATTRLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSPVYSLCVAFVFINYAQLCLPCVVVIIMLPVLCXXXXXXXRILARIQDPMRGKGATPSMINKLPMMKYRQIQAEKAATASAGSLEGQAAPPASQGG--------EQDTQVSVTGVESNSTSCAVCISEYAPDEDVRLLPCAHYFHASVGKGGGXXXXXXXXXXXXXGRGLIGCLDLLIRGIPHFFSHLGSASCPASSFAFPPSLLPLPLAAVSLGPSPASLPTLSIHTLPSLPLSSQCVDEWLKVNASCPTCRASILPESAEQPTPRSSHYGTTSAGVLGSSASTSLSGGSTGNSPGGAGQGTIHPLTTSPLS--SASSAIPTHPGTPHRGG 385          
BLAST of NO14G02390 vs. NCBI_GenBank
Match: OQR85950.1 (transmembrane protein [Thraustotheca clavata])

HSP 1 Score: 166.8 bits (421), Expect = 1.700e-37
Identity = 97/282 (34.40%), Postives = 143/282 (50.71%), Query Frame = 0
Query:  123 LVNIPQIIAAIVILSKYWYDDTCVATETAKWKTYALIAAMRMFLYVSSVSALYYLNGRGPNVSV-SGSLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAPDEDVRLLPCEHYFHASCVDEWLKVNASCPTCRASILPEHADQS 404
            + N+PQ++A +++LS YW D   +  +  K+  + L   + +FL V    A+YY +  G    + + S+   L  A+  L+  GL WF+VGNMW+   D + C       +Y++ +A V I Y ++ LPC++++ +LPV+        RIL R+QDPMRGKGAT  MI  L  +KY                                       P L          SC IC++EY  ++++R+L C H+FH  CVDEWL VNA+CPTCR SI P H D S
Sbjct:   60 IFNLPQVLAGVIVLSLYWDDGEKLRCDRVKY--WTLFHTIHLFLTVVVEYAVYYTHSPGQRSRLATPSVKSVLQSAKYCLELMGLFWFLVGNMWVI-SDEDHCSANGGGHIYNMAMAMVIICYIKIFLPCLILLALLPVVCFCLPCLIRILNRMQDPMRGKGATKEMIEALSSVKY--------------------------------------TPDLF---PPDEDASCCICLNEYTDNQELRILHCNHHFHKDCVDEWLVVNATCPTCRTSIDPNHIDAS 297          
BLAST of NO14G02390 vs. NCBI_GenBank
Match: XP_009034871.1 (hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens] >EGB10028.1 hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens])

HSP 1 Score: 165.6 bits (418), Expect = 3.800e-37
Identity = 91/278 (32.73%), Postives = 133/278 (47.84%), Query Frame = 0
Query:  123 LVNIPQIIAAIVILSKYWYD--DTCVATETAKWKTYALIAAMRMFLYVSSVSALYYLNGRGPNVSVSGSLMRFL---SHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAPDEDVRLLPCEHYFHASCVDEWLKVNASCPTCRASI 396
            LVN+PQ++    +    W    D C AT  A+W+ +     +R+          +    R P  +   S  R+L   ++ARN LDA  LIWFVVGNMWL GG  + C    +SP+Y   V  + + Y Q+CLPC+  I M+PV         R+LA + DP+ G+GAT   +++LP + Y +  E                                         ++     C++CIS+Y   + +R+LPC+H FH  CVD+WL VNA+CP CR SI
Sbjct:   79 LVNLPQVVVLACVFFFEWDADLDVCDATARAQWRVWGFFHGLRLAATTVVAGLRWRFAPRPPPDADRASRRRYLVMVTNARNSLDALALIWFVVGNMWLLGGADDSCAEAGKSPIYVTDVVMLVVQYGQICLPCIFAIAMVPVFCFCLPCVIRLLASLHDPVAGRGATKRDLARLPTVPYSENMEL----------------------------------------LKGEDPCCSVCISDYEKGDKLRVLPCKHLFHVDCVDQWLSVNATCPLCRKSI 316          
BLAST of NO14G02390 vs. NCBI_GenBank
Match: XP_009534322.1 (hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae] >EGZ09461.1 hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae])

HSP 1 Score: 161.0 bits (406), Expect = 9.400e-36
Identity = 96/277 (34.66%), Postives = 140/277 (50.54%), Query Frame = 0
Query:  121 VLLVNIPQIIAAIVILSKYWYDDTCVATETAKWKTYALIAAMRMFLYVSSVSALYYLNGRGPN--VSVSGSLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAPDEDVRLLPCEHYFHASCVDEWLKVNASCPTCRASI 396
            + LVN+PQI AA+ IL+ +W  +T       + + + L+  + + L +     LYYLNG   N  + +    M  LS  + GLD  GL WF+VGNMW+   D   C   + S +Y L +  + I+YA++ LPC++++ +LPVL        R+L+R+QDPMRGKGAT  +I +L    Y                                          S          C IC+++Y P + +R+LPCEH+FH  CVDEWL VN++CPTCR SI
Sbjct:   72 ISLVNVPQIAAAVAILALHWQSETL----CYRIQVWVLLHTVHLALTLLLEWTLYYLNGARSNSAIRLREHYMAPLSQLKYGLDLAGLFWFLVGNMWVI-SDGARC--DDGSAMYQLALWMIVISYAKIFLPCLLLLALLPVLCFCLPCVIRLLSRLQDPMRGKGATKEIIDRLETKTY------------------------------------------SANMFPPEDACCCICLNDYEPSQSLRVLPCEHHFHKDCVDEWLLVNSTCPTCRKSI 299          
BLAST of NO14G02390 vs. NCBI_GenBank
Match: XP_024581239.1 (transmembrane protein [Plasmopara halstedii] >CEG44870.1 transmembrane protein [Plasmopara halstedii])

HSP 1 Score: 160.6 bits (405), Expect = 1.200e-35
Identity = 94/275 (34.18%), Postives = 140/275 (50.91%), Query Frame = 0
Query:  123 LVNIPQIIAAIVILSKYWYDDTCVATETAKWKTYALIAAMRMFLYVSSVSALYYLNGRGPN--VSVSGSLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAPDEDVRLLPCEHYFHASCVDEWLKVNASCPTCRASI 396
            +VN+PQI+AAIV+L  +W  +T       + + + L+  + +   +     LY+LNG   N  + +    M FLS  + GLD  GL WF+VGNMW+   D   C   + S +Y L +  + I+YA++ LPC++++ +LPVL        R+L+R+QDPMRGKGAT  +I +L    Y                                            +   S    C IC+++Y P + +R+LPC H+FH  CVDEWL VN++CPTCR SI
Sbjct:   85 IVNVPQIVAAIVLLVLHWQSETL----CYRIQVWVLLHTIHLTFTLLLEWTLYFLNGATSNSAIRLREQYMTFLSQLKYGLDLAGLFWFLVGNMWVI-SDGARC--DDGSAMYQLALWMIVISYAKIFLPCLLLLALLPVLCFCLPCVIRLLSRLQDPMRGKGATKEIIDQLETKAY------------------------------------------VASMFPSEDACCCICLNDYEPSQSLRVLPCAHHFHKECVDEWLLVNSTCPTCRKSI 310          
BLAST of NO14G02390 vs. NCBI_GenBank
Match: XP_012195473.1 (hypothetical protein SPRG_01716 [Saprolegnia parasitica CBS 223.65] >KDO33837.1 hypothetical protein SPRG_01716 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 160.2 bits (404), Expect = 1.600e-35
Identity = 97/280 (34.64%), Postives = 139/280 (49.64%), Query Frame = 0
Query:  125 NIPQIIAAIVILSKYWYDDTCVATETAKWKTYALIAAMRMFLYVSSVSALYYLNG---RGPNVSVSGSLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAPDEDVRLLPCEHYFHASCVDEWLKVNASCPTCRASILPEHAD 402
            N+PQ+IAA +++  YW  D    T   + K + L  AM +F  V    A+YY +    R P  +   S+   L  A+ G++  GL WF+VGNMW+   D + C       +Y++ +A + I Y ++ LPC++++ +LPV+        RIL R+QDPMRGKGA+  MI+ L  + Y                                       P L          SC IC++EY   + VR+L C H+FH  CVDEWL VNA+CPTCR SI P HA+
Sbjct:   65 NLPQVIAASIVMGLYW--DDAGNTRCDRVKYWTLFHAMHLFFTVLVEWAVYYTHRPTIRSPWATT--SVKSALQSAKYGMELMGLFWFLVGNMWVI-SDEDHCSTQGDGHMYNMALAMIIICYIKIFLPCLILMALLPVVCFCLPCLIRILNRMQDPMRGKGASKEMIAALSSVPY--------------------------------------TPHL----FPDEDASCCICLNEYDESQHVRILHCNHHFHKECVDEWLVVNATCPTCRTSIDPNHAE 297          
BLAST of NO14G02390 vs. NCBI_GenBank
Match: XP_008620569.1 (hypothetical protein SDRG_16148 [Saprolegnia diclina VS20] >EQC26001.1 hypothetical protein SDRG_16148 [Saprolegnia diclina VS20])

HSP 1 Score: 159.1 bits (401), Expect = 3.600e-35
Identity = 94/278 (33.81%), Postives = 138/278 (49.64%), Query Frame = 0
Query:  125 NIPQIIAAIVILSKYWYDDTCVATETAKWKTYALIAAMRMFLYVSSVSALYYLNGRGPNVSVS-GSLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAPDEDVRLLPCEHYFHASCVDEWLKVNASCPTCRASILPEHAD 402
            N+PQ+IAA +++  YW  D    T   + K + L+ AM +F  V    A+YY +    +  +S   +   L  A+ G++  GL WF+VGNMW+   D + C       +Y++ +A + I Y ++ LPC++++ +LPV+        RIL R+QDPMRGKGA+  MI+ L  + Y                                       P L          SC IC++EY   + VR+L C H+FH  CVDEWL VNA+CPTCR SI P H +
Sbjct:   67 NLPQVIAACIVMGLYW--DDAGNTRCDRVKYWTLLHAMHLFFTVLVEWAVYYTHQPTIHSRLSTPGIKSALQSAKYGMELMGLFWFLVGNMWVI-SDEDHCSTQGDGHMYNMALAMIIICYVKIFLPCLILMALLPVVCFCLPCLIRILNRMQDPMRGKGASKEMIAALSSVPY--------------------------------------TPHL----FPDEDASCCICLNEYDESQHVRILHCNHHFHKECVDEWLLVNATCPTCRTSIDPNHVE 299          
BLAST of NO14G02390 vs. NCBI_GenBank
Match: OWZ04747.1 (Transmembrane protein [Phytophthora megakarya])

HSP 1 Score: 158.7 bits (400), Expect = 4.700e-35
Identity = 95/277 (34.30%), Postives = 139/277 (50.18%), Query Frame = 0
Query:  121 VLLVNIPQIIAAIVILSKYWYDDTCVATETAKWKTYALIAAMRMFLYVSSVSALYYLNGRGPN--VSVSGSLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLPCVVVIVMLPVLXXXXXXXXRILARIQDPMRGKGATPTMISKLPLMKYRQVQEEQFRTGTAAGAXXXXXXXXXXXXXXXXXXXHEQQPQLSVTGVESNSTSCAICISEYAPDEDVRLLPCEHYFHASCVDEWLKVNASCPTCRASI 396
            + LVN+PQI+ A VIL  +W  +T       + + + L+  + + L +     LYYLNG   N  + +    M  LS  + GLD  GL WF+VGNMW+   D   C   + S +Y L +  + I+YA++ LPC++++ +LP+L        R+L+R+QDPMRGKGAT  +I +L    Y                                          +V         C IC+++Y P + +RLLPC H+FH  CVDEWL VN++CPTCR SI
Sbjct:   71 ISLVNLPQIVVAAVILGLHWQGETL----CYRIQVWVLLHTIHLTLTLLLEWTLYYLNGARSNSAIRLREQYMAPLSQLKYGLDLAGLFWFLVGNMWVI-SDGARC--DDGSAMYQLALWMIVISYAKIFLPCLLLLALLPILCFCLPCVIRLLSRLQDPMRGKGATKELIDQLETKTY------------------------------------------TVNMFPPEDACCCICLNDYEPSQSLRLLPCGHHFHKECVDEWLLVNSTCPTCRKSI 298          
The following BLAST results are available for this feature:
BLAST of NO14G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24570.16.400e-10168.51e3 ubiquitin-protein ligase [Nannochloropsis gadit... [more]
XP_005855177.16.600e-9075.21hypothetical protein NGA_0133600 [Nannochloropsis ... [more]
EWM24571.13.300e-8953.02e3 ubiquitin-protein ligase [Nannochloropsis gadit... [more]
OQR85950.11.700e-3734.40transmembrane protein [Thraustotheca clavata][more]
XP_009034871.13.800e-3732.73hypothetical protein AURANDRAFT_36689 [Aureococcus... [more]
XP_009534322.19.400e-3634.66hypothetical protein PHYSODRAFT_521400 [Phytophtho... [more]
XP_024581239.11.200e-3534.18transmembrane protein [Plasmopara halstedii] >CEG4... [more]
XP_012195473.11.600e-3534.64hypothetical protein SPRG_01716 [Saprolegnia paras... [more]
XP_008620569.13.600e-3533.81hypothetical protein SDRG_16148 [Saprolegnia dicli... [more]
OWZ04747.14.700e-3534.30Transmembrane protein [Phytophthora megakarya][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002455NSK002455Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02390.1NO14G02390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555700gene_5820Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100462g2gene5911Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02390.1NO14G02390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02390 ID=NO14G02390|Name=NO14G02390|organism=Nannochloropsis oceanica|type=gene|length=2864bp
ACAGCGCTTTACCGTCGCATGCTCGCTGGAGGCCCGAACAGCCAGCAGCT
GAGCGCCACATAAGCAGCAAGAGGGGCCAGTAAGGAGCTTGAGCAGGAGC
GACTGCTGCTGCTACGCCCCCTCCTACCCTACCCTGAAAAGGAAGACGAC
GCATAGTTCACGGCGCGTGGACACCCACACTCAGgtatgtgagagaggga
ggtggagaaggagaagcaggagggtatagaggggatgaagtagctatctt
ggcacgggtgtttcggaaggagagtcgactgaaacgggaggggacgtggc
ggaagagaaggagggcattcatgagaaaagggcaggcaacccgaggcctt
ctaagaaacggagatataaatataagaacagggatcatcttccgtttgac
cctatcgacacaagaatctatcgattctcaaccttattttaaacccaact
aattgatcccctctctccgcactcgttctccttccattcccgtccacagG
TCAGCCATTGCGTCGAGGGCTGACCGCGACGCGCCTGGGCCGTTGCAAGC
GGTGGAAATGAGCTACGTGCCCATGTCCAGGGCATCCCACTCGgtaggta
gtgaatgagggagggagcgagggaagggagggatgaagcgaggtaaggtg
tatatctgtcctaccatgtctcctctttatccacgccccaatgcatgctc
atcacccatttccccctcatcttcaatctactctcattgttatttatcag
GGAAGCACCGGCGGTGTGGGGGGCAGCATGACAGGCAACAGCAGCAGCAG
TGGTGGACAGACCCAATTAGAAATGGATGAGGCGCTAGCCCGACAGCTGC
AACGAGCTGAGCTGGACGGGATCAGCACTCCCTTAATTTTAGGAGGAGGG
CCGGGTGGTGGGGGAGGAGGTGGGTCGGGAGTGGGTGGGAGTGGCGGAGT
AGGAGGAGGCGGCGGTGGGGGGGGGGGAGGGCGGGAAGGCCCTATCGACG
AAGCCAGACAAACGCGGTTGAACGCGTTGCAGAATGTGCGAGAGGTTCGG
AGTGCGAGCTTTGCGTTGTGCATTGTATTGTTGGTGAACATTCCCCAGAT
CATCGCGGCGATTGTGATCTTGTCCAAGTACTGGTACGATGACACGTGTG
TGGCAACCGAGACGGCGAAGTGGAAGACTTACGCCTTGATTGCGGCGATG
CGTATGTTTTTGTACGTGTCCTCCGTGTCAGCGCTGTATTATTTGAACGG
ACGGGGGCCGAATGTCAGTGTGAGTGGGTCGTTGATGCGGTTTTTGAGCC
ATGCAAGGAACGGACTAGATGCGTTTGGACTGATCTGGTTTGTGGTTGGA
AATATGTGGTTATTCGGAGGGGACGTGGAGGTTTGCCCCCACCCCAACCG
GAGCCCGCTGTACAGCTTGTGTGTAGCCTTTGTCTTCATCAATTATGCTC
AGCTGTGCCTGCCCTGCGTGGTGGTGATCGTGATGTTGCCAGTTTTGTGC
TTTTGCTTGCCGTGCCTAATTCGAATTTTGGCGCGAATCCAAGACCCGAT
GCGAGGAAAGGGCGCAACGCCCACAATGATCAGTAAGCTACCACTCATGA
AATACCGGCAAGTCCAAGAGGAGCAATTTAGAACAGGAACAGCAGCAGGA
GCAACGGCAAACGCGGGAGGTGCAGCAGGGACAGAGGGAGGGGTAGGAAG
AGGGCAGGGGCATGAACAGCAGCCGCAGTTGTCAGTGACGGGGGTTGAGA
GTAACAGCACGTCGTGCGCAATTTGTATCAGTGAATACGCGCCGGACGAG
GACGTGAGACTATTACCATGTGAACACTATTTCCATGCTTCGgtaagtga
gcaaaaatggtttttttaatcgctccccacccgttcttaccctccttccc
tccctcccttccatcctccctcccgcccattttgaatcagTGCGTCGACG
AGTGGCTTAAGGTTAATGCCTCCTGCCCCACTTGCCGTGCCTCCATCCTC
CCCGAACATGCCGACCAATCCACACCCCGTTCTTCCCACTATGGCACCAC
AACTTCAGCTGGAGCCAGCAGCAGCAGTATCAGTAGCGTTGGCAGCGCAG
GGAACAGCCCGGGAGGAGGTCTGGGAGGAAATCTTCCTGTTGCGATCTCC
CCCCCGTCCTCTATCTCGCCAAGTGGCTCAATTCCGATGCCTGGCACGCC
GATGCATGGTGGGGGAAGGGAGGGAGGGAGGGAGGGCGGGCGTTCATCGC
AGTCGCATCACCAACGAGGGGATCATTTAGTGTAGACGGACGGAGAAAGC
GAAAACGGACAAGACAAATGGGGTCAGAAATGTGTCTTGCAACGAGATGG
GCAATTGGACGAGCTGCAGTATCATTACAGACACGTAGAAGAAGAGGAAG
GAGGGCGGAAGGATGCATCCTTTCTACCCCTTTCTTTGGTCGGTTGGCCT
TTCGTGTGTGTTTCATGTGTCTTATTGCATGTGGTCGTGGCTGTGAGCTT
TTGTTTGAGTAGGTAGCGGTGGTATGTACAGGCCACTCTCGGGGAAAGAG
GTGGAAGGGAACGATGGAGAGAGAGACGCGATGCGATGGAAGGGGAGCGT
TAGGTCCCCTCCCTTTTTGGGAAAGACATGATAAGAATCAAAAATATCAG
AGACAGAACAACGACGAGGAGATATATACAGAAGAGAGGAAGAAGGAATA
AGAGGAGACGCGCGTGCGCTCTTACTCGAAAAAGAAAATTTGGGATTTGA
AAAGAGAAAAATATAGGAATAATAGTAGTATGTAGTAGCCTTTTTCTTTG
TGTTGCTTCATCCGGGAGACACTGCCGAAAATTCTGGCAAGAAAAAAACT
TCTGGTTTAGGACG
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protein sequence of NO14G02390.1

>NO14G02390.1-protein ID=NO14G02390.1-protein|Name=NO14G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=491bp
MSYVPMSRASHSGSTGGVGGSMTGNSSSSGGQTQLEMDEALARQLQRAEL
DGISTPLILGGGPGGGGGGGSGVGGSGGVGGGGGGGGGGREGPIDEARQT
RLNALQNVREVRSASFALCIVLLVNIPQIIAAIVILSKYWYDDTCVATET
AKWKTYALIAAMRMFLYVSSVSALYYLNGRGPNVSVSGSLMRFLSHARNG
LDAFGLIWFVVGNMWLFGGDVEVCPHPNRSPLYSLCVAFVFINYAQLCLP
CVVVIVMLPVLCFCLPCLIRILARIQDPMRGKGATPTMISKLPLMKYRQV
QEEQFRTGTAAGATANAGGAAGTEGGVGRGQGHEQQPQLSVTGVESNSTS
CAICISEYAPDEDVRLLPCEHYFHASCVDEWLKVNASCPTCRASILPEHA
DQSTPRSSHYGTTTSAGASSSSISSVGSAGNSPGGGLGGNLPVAISPPSS
ISPSGSIPMPGTPMHGGGREGGREGGRSSQSHHQRGDHLV*
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Synonyms
Publications