NO14G02360, NO14G02360 (gene) Nannochloropsis oceanica

Overview
NameNO14G02360
Unique NameNO14G02360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1618
Alignment locationchr14:702602..704219 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:702602..704219 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO14G02360 vs. NCBI_GenBank
Match: PFX25309.1 (hypothetical protein AWC38_SpisGene10076 [Stylophora pistillata])

HSP 1 Score: 70.9 bits (172), Expect = 4.100e-9
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 0
Query:    1 MVLDSRIEKRL-AGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYF 128
            M++DS + + L        G+   ++ DPA+     +  PFRH V T +    N  +S VRVTVE   G I   L  + F +  ++G   V K  LV   L N  TC+  GN+  EFFG  PP+L+Y+
Sbjct:  230 MLVDSNLLQELERNAFSPTGQPMSVYGDPAYPLRIRLQAPFRHGVLTPMMEKYNFDMSSVRVTVESLFGDIINDLKFLDFKKNLKIGMSIVGKMYLVCALLNNAVTCLY-GNKTSEFFGLDPPSLQYY 356          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_022795686.1 (uncharacterized protein LOC111334269 [Stylophora pistillata] >PFX22434.1 hypothetical protein AWC38_SpisGene13064 [Stylophora pistillata])

HSP 1 Score: 70.1 bits (170), Expect = 7.100e-9
Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 0
Query:    1 MVLDSRIEKRL-AGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYF 128
            M++DS + + L        G+   ++ DPA+     +  PFRH V T +    N  +S VRVTVE   G I      + F +  ++G   V K  LV   L N  TC+  GN+  EFFG  PP+L+Y+
Sbjct:  230 MLVDSNLLQELERNAFSPTGQPMSVYGDPAYPLRIHLQAPFRHGVLTPMMEQFNFDMSSVRVTVEWLFGDIINDFKFLDFKKNLKIGMSSVGKMYLVCALLNNAVTCLY-GNKTSEFFGLDPPSLQYY 356          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_022777897.1 (uncharacterized protein LOC111319370 [Stylophora pistillata])

HSP 1 Score: 70.1 bits (170), Expect = 7.100e-9
Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 0
Query:    1 MVLDSRIEKRL-AGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYF 128
            M++DS + + L        G+   ++ DPA+     +  PFRH V T +    N  +S VRVTVE   G I      + F +  ++G   V K  LV   L N  TC+  GN+  EFFG  PP+L+Y+
Sbjct:   14 MLVDSNLLQELERNAFSPTGQPMSVYGDPAYPLRIHLQAPFRHGVLTPMMEQFNFDMSSVRVTVEWLFGDIINDFKFLDFKKNLKIGMSSVGKMYLVCALLNNAVTCLY-GNKTSEFFGLDPPSLQYY 140          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_018292405.1 (hypothetical protein PHYBLDRAFT_144813 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD74365.1 hypothetical protein PHYBLDRAFT_144813 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 68.9 bits (167), Expect = 1.600e-8
Identity = 39/115 (33.91%), Postives = 58/115 (50.43%), Query Frame = 0
Query:   14 FCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            F    G  Y L+ DPA+ A   +  PFR   A E E   N  +S VR++VE    H+    + + + +T+R G   V    +VG FL+N+     GGNQ  + +G  PPT E ++
Sbjct:  154 FTNINGPCYYLYGDPAYTASDHMMIPFRRQTADEQELAINKSMSAVRISVEHKFAHVGSLWAFLKYSQTQRSGRSPVGLYYIVGTFLKNLHVYYNGGNQTSKKYGVAPPTPEQYI 268          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_015747153.1 (PREDICTED: uncharacterized protein LOC107326914 [Acropora digitifera])

HSP 1 Score: 67.8 bits (164), Expect = 3.500e-8
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 0
Query:    5 SRIEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFLEER 132
            S +  +L  F    G  Y ++ DPA+G  + I  PFR    T+ E   NTR+S+VR  VE     I Q  + + F +  ++    V K  LV C L N  TC   G+Q   +F   PP++E +L  +
Sbjct:  102 SGLSAKLRRFVQHNGEPYVIYGDPAYGITQNIISPFRQAHLTDDEQEFNTRMSKVRTCVEWGFAKICQNFAYLDFKKNLKILLQPVGKYYLVACILINCHTCFY-GSQTSTYFNLEPPSVETYLSNQ 227          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: ETP21708.1 (hypothetical protein F441_04839 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 67.4 bits (163), Expect = 4.600e-8
Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 0
Query:    7 IEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            +E+R + F G     Y L+ DPA+G  +F+   FR T  T+ E   N  ++  R  VE   G +    + + F ++ R+    + K  LV   L N   C  GGNQI  FFG  PP+L+ +L
Sbjct:  237 MEERASIFDG-----YVLYGDPAYGIRKFLVSGFRKTAPTDTEQRFNKLMNSTREAVEWQFGSMKSLWAFIDFNKSLRLRLSPIGKYVLVSMLLTNCHCCYNGGNQISAFFGLAPPSLDAYL 353          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: ETP33183.1 (hypothetical protein F442_18247 [Phytophthora parasitica P10297])

HSP 1 Score: 67.0 bits (162), Expect = 6.000e-8
Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0
Query:    7 IEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            +E+R + F G     Y L+ DPA+G  +F+   FR T  T+ E   N  +S VR  VE   G +    + + F ++ R+    + K  LV   L N   C  G NQI  FFG  PP+L+ +L
Sbjct:  115 MEERASIFDG-----YVLYGDPAYGIHKFLVSGFRKTAPTDTEQRFNKLMSSVREAVEWQFGSMKSLWAFIDFNKSLRLRLSPIGKYVLVSMLLTNCQCCYNGDNQISAFFGLAPPSLDAYL 231          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_008877602.1 (hypothetical protein H310_12357 [Aphanomyces invadans] >ETV93793.1 hypothetical protein H310_12357 [Aphanomyces invadans])

HSP 1 Score: 67.0 bits (162), Expect = 6.000e-8
Identity = 37/109 (33.94%), Postives = 57/109 (52.29%), Query Frame = 0
Query:   20 RDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            R + ++ DPA+G    ++ PF     T+ +   N  +SRVR++VE + G + Q    V F +  R+G+  + K   V   L N  TC RG N    +FG  PP+LE +L
Sbjct:  239 RGFIVYGDPAYGYPDQLASPFGGARLTDAQRKVNKSMSRVRISVEWSFGQVLQYWPIVDFKKKMRIGNSPISKMYKVAVLLTNCITCDRGRNTNSAYFGLPPPSLEEYL 347          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: ETI35192.1 (hypothetical protein F443_18420 [Phytophthora parasitica P1569])

HSP 1 Score: 66.2 bits (160), Expect = 1.000e-7
Identity = 38/107 (35.51%), Postives = 54/107 (50.47%), Query Frame = 0
Query:   22 YKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            Y L+ DPA+G  +F+   FR T  T+ E   N  +S VR  VE   G +    + + F ++ R+    + K  LV   L N   C  G NQI  FFG  PP+L+ +L
Sbjct:   90 YVLYGDPAYGIHKFLVSGFRKTAPTDTEQRFNKLMSSVREAVEWQFGSMKSLWAFIDFNKSLRLRLSPIGKYVLVSMLLTNCQCCYNGDNQISAFFGLAPPSLDAYL 196          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: ETO63953.1 (hypothetical protein F444_18433 [Phytophthora parasitica P1976])

HSP 1 Score: 66.2 bits (160), Expect = 1.000e-7
Identity = 38/107 (35.51%), Postives = 54/107 (50.47%), Query Frame = 0
Query:   22 YKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            Y L+ DPA+G  +F+   FR T  T+ E   N  +S V   VE   G +    + + F ++ R+    + K  LV   L N   C  GGNQI  FFG  PP+L+ +L
Sbjct:   90 YVLYGDPAYGIHKFLVSGFRKTAPTDTEQRFNKLMSSVLEAVEWQFGSMKSLWAFIDFNKSLRLRLSPIGKYVLVSMLLTNCHCCYNGGNQISAFFGLAPPSLDAYL 196          
The following BLAST results are available for this feature:
BLAST of NO14G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PFX25309.14.100e-935.16hypothetical protein AWC38_SpisGene10076 [Stylopho... [more]
XP_022795686.17.100e-934.38uncharacterized protein LOC111334269 [Stylophora p... [more]
XP_022777897.17.100e-934.38uncharacterized protein LOC111319370 [Stylophora p... [more]
XP_018292405.11.600e-833.91hypothetical protein PHYBLDRAFT_144813 [Phycomyces... [more]
XP_015747153.13.500e-833.07PREDICTED: uncharacterized protein LOC107326914 [A... [more]
ETP21708.14.600e-833.61hypothetical protein F441_04839 [Phytophthora para... [more]
ETP33183.16.000e-834.43hypothetical protein F442_18247 [Phytophthora para... [more]
XP_008877602.16.000e-833.94hypothetical protein H310_12357 [Aphanomyces invad... [more]
ETI35192.11.000e-735.51hypothetical protein F443_18420 [Phytophthora para... [more]
ETO63953.11.000e-735.51hypothetical protein F444_18433 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02360.1NO14G02360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590402gene_5815Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02360.1NO14G02360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02360 ID=NO14G02360|Name=NO14G02360|organism=Nannochloropsis oceanica|type=gene|length=1618bp
AATTCAAGAAAAGAAGGGGAGTGTTGTGGGTGGGGGAGGGGGTAATTTTG
GTGGGGTTGTGCACGGCTTTAAGTATCTGATCATCCCTCTCCCGTCGGTC
TGGTGGAGGAAGACGCTGGACCCTACCCTGGCCGCATTTCCGACAGCGCT
ATGGTTTTGGATTCGCGCATCGAGAAGCGCTTGGCTGGCTTTTGTGGCCA
GGAGGGGCGGGATTACAAATTATTTGTGGACCCAGCTTTCGGTGCTTTGC
GTTTCATCTCGAAGCCATTCAGGCACACTGTAGCGACGGAGGTTGAGTCC
ATCAGAAACACGCGCATTTCGCGCGTGCGCGTGACTGTGGAGCAAACAAT
AGGGCACATTACGCAGCAGCTTTCGGCCGTTGTTTTCGTACGAACAGAGC
GTGTCGGCGACGGGGATGTGTGCAAGAGAAACCTCGTCGGTTGCTTCTTG
CGCAACGTTTGGACGTGCGTGCGGGGAGGGAACCAAATCTTGGAGTTCTT
TGGGTGGTGCCCGCCGACACTTGAGTATTTTTTGGAAGAACGACAATTCC
GCGATCCTCTCCCACCCCGCCTGGAGCAAATGGGTGTCTTTCAACTACGG
ACATCAGAAGAACAAGAAGATGAGTGAGACAAAAGAAATTATTCGTACTA
CGTATGCGACATAACATTCGTGTTTCACTTCTTTCGTTTCATGCATCTAT
CGATCCTACACCTCGTCGTCGCCGGCACTGTACAGCTTCTCCCACCGCCT
CTTCATGAGGCGGGGGAGCGCGGCCGCAGTCAAATTAGAGTCCAGCATGA
GCTTATGGAGCTTCACCAATTGCTCCAGGTTCTCTTCATTTTTTTCTTCC
TATCCTCCTCCTCCCATTCCTCTTCTATCTTCTTACTTTCCACTTCAATC
GTCATTAAATTTAATATGGCTTCGATGGGCTCGGCTATCTTCATCTTCTC
GTCAATTGTCTTTTGACGCTTTATGAATACAGTCGCCATCGCCCTTTGTC
TCTTCCCCCGATCATTCCGCTTATGCACGCCGCCCCAGTCGGCGGTTGAG
ACACCCGACGATGACAGGGAGGCTTCGCAGTCTTCATCCTCCTCCGTCCC
ATACTCTTCATCCTATTCCTCCTTCTCCTCTTCCTCCTTCTCCTCGTTAT
CCCCCTTCCCCCCCACCTTATTCCTGAAACTGCTACGGAGGGAGTAAGTG
GGTGGGTGGGTGAATGTGTATGCGTGCTTGTGCGTGAGTGTGTGAGCGGG
TGGGTGAGTGACATCCCAAACACCACGATTTAACGTCTGAAAGACAATCA
CTTTCTTACCTGATGTACATATGTGGCTTTTTTATCGGTCTCCGCATCGC
TATGCCAACAGCAAGAGCCAGAAGGCGCCGCCGCCTACGGATCTGCTGTC
CGCGCGCCAGGCCATAGTGGAATCATCAAGGCGCCCGCGGCACGCTCCGT
TGGTTGCCGTTCGCCATTAGCCAAGCGCCGAGTAGAACGTGTGACCTCTT
CATGCTCCCGATTTAAATCCCTCTATTCCGTCTGGGCCATGGTTTGATCG
AAAATCACCATTTAATGGCCTTGTTGTACCTCCGCCGTTTTCTTAGTCCG
GAACGGTCTCTTTTCCGG
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protein sequence of NO14G02360.1

>NO14G02360.1-protein ID=NO14G02360.1-protein|Name=NO14G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=159bp
MVLDSRIEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVES
IRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFL
RNVWTCVRGGNQILEFFGWCPPTLEYFLEERQFRDPLPPRLEQMGVFQLR
TSEEQEDE*
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Synonyms
Publications