NO14G02360, NO14G02360 (gene) Nannochloropsis oceanica

Overview
NameNO14G02360
Unique NameNO14G02360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1618
Alignment locationchr14:702602..704219 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:702602..704219 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_008917000.1 (hypothetical protein PPTG_24854 [Phytophthora parasitica INRA-310] >ETM97702.1 hypothetical protein PPTG_24854 [Phytophthora parasitica INRA-310])

HSP 1 Score: 79.7 bits (195), Expect = 8.900e-12
Identity = 47/130 (36.15%), Postives = 68/130 (52.31%), Query Frame = 0
Query:    4 DSRIEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIR--NTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFLEER 132
            DS+I +R+        + YK++ D A+G    ++ P+   V       R  N  +SRVRV+VE + G +T   +A+ F R  RVG   V     VG FL N  TC +GGN I ++FG  PP+L  +L  R
Sbjct:  164 DSKISERIRN--DSRFQQYKIYGDQAYGNDDVLTSPYAGAVGNRSREQRQVNVSMSRVRVSVEWSYGQVTNYWTALDFKRQARVGIQPVGLMYRVGVFLTNCITCTQGGNTISDYFGLAPPSLSVYLNTR 291          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: ETI49993.1 (hypothetical protein F443_06365 [Phytophthora parasitica P1569])

HSP 1 Score: 78.6 bits (192), Expect = 2.000e-11
Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 0
Query:    4 DSRIEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIR--NTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFLEER 132
            DS+I +R+        + YK++ D A+G    ++ P+   V       R  N  +SRVRV++E + G +T   +A+ F R  RVG   V     VG FL N  TC +GGN I ++FG  PP+L  +L  R
Sbjct:  266 DSKISERIRN--DSRFQQYKIYGDQAYGNDDVLTSPYAGAVGNRSREQRQVNVSMSRVRVSMEWSYGQVTNYWTALDFKRQARVGIQPVGLMYRVGVFLTNCITCTQGGNTISDYFGLAPPSLSVYLNTR 393          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: ETP15685.1 (hypothetical protein F441_09609 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 78.6 bits (192), Expect = 2.000e-11
Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 0
Query:    4 DSRIEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIR--NTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFLEER 132
            DS+I +R+        + YK++ D A+G    ++ P+   V       R  N  +SRVRV++E + G +T   +A+ F R  RVG   V     VG FL N  TC +GGN I ++FG  PP+L  +L  R
Sbjct:  113 DSKISERIRN--DSRFQQYKIYGDQAYGNDDVLTSPYAGAVGNRSREQRQVNVSMSRVRVSMEWSYGQVTNYWTALDFKRQARVGIQPVGLMYRVGVFLTNCITCTQGGNTISDYFGLAPPSLSVYLNTR 240          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: ETP27956.1 (hypothetical protein F442_22758 [Phytophthora parasitica P10297])

HSP 1 Score: 78.6 bits (192), Expect = 2.000e-11
Identity = 47/130 (36.15%), Postives = 68/130 (52.31%), Query Frame = 0
Query:    4 DSRIEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIR--NTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFLEER 132
            DS+I +R+        + YK++ D A+G    ++ P+   V       R  N  +SRVRV+VE + G +T   +A+ F R  RVG   V     VG FL N  TC +GGN I ++FG  PP+L  +L  R
Sbjct:  243 DSKISERIRN--DSRFQQYKIYGDQAYGNDDVLTSPYAGAVGNLSREQRQVNVSMSRVRVSVEWSHGQVTNYWTALAFKRQARVGIQPVGLMFRVGVFLTNCITCTQGGNTISDYFGLAPPSLSVYLNTR 370          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_008902203.1 (hypothetical protein PPTG_09097 [Phytophthora parasitica INRA-310] >ETN12205.1 hypothetical protein PPTG_09097 [Phytophthora parasitica INRA-310])

HSP 1 Score: 77.8 bits (190), Expect = 3.400e-11
Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = 0
Query:    7 IEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFLEER 132
            +E+R + F G     Y L+ DPA+G  +F+   FR T  T+ E   N  +S VR +VE   G +    + + F ++ R+    + K  LV   L N   C  GGNQI  FFGW PP+L+ +L +R
Sbjct:  237 MEERASIFDG-----YVLYGDPAYGIRKFLVSGFRKTAPTDTEQRFNKLMSSVRESVEWQFGSMKSLWAFIGFNKSLRLRLSPIGKYVLVSMLLTNCHCCYNGGNQISAFFGWAPPSLDAYLAKR 356          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_018295260.1 (hypothetical protein PHYBLDRAFT_165708 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD77220.1 hypothetical protein PHYBLDRAFT_165708 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 75.1 bits (183), Expect = 2.200e-10
Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = 0
Query:   22 YKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            Y L+ D A+     +++PFR T A+E +++ NT +SRVR++VEQ   H+    + + + +T+R+    V    ++G FL+NV  C  GGN+    F   PPT E ++
Sbjct:   93 YHLYGDSAYANSAVMARPFRITNASEDDTVFNTEMSRVRISVEQEFAHVGSFFAFLKYSQTQRIDQCSVGLYYIIGTFLKNVHICYNGGNKTSAKFDVSPPTPEQYI 199          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_018287345.1 (hypothetical protein PHYBLDRAFT_149704 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD69305.1 hypothetical protein PHYBLDRAFT_149704 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 73.9 bits (180), Expect = 4.900e-10
Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 0
Query:   14 FCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            F    G  Y L+ DPA+ A   +  PFR   A E E   N  +S VR++VE    H+    + + + +T+R G   V    +VG FL+N+  C  GGNQ  + +G  PPT E ++
Sbjct:  283 FTSINGPCYYLYGDPAYTASDHMMIPFRRQTADEQELAINKSMSAVRISVEHEFAHVGSLWAFLKYSQTQRSGQSPVGLYYIVGTFLKNLHVCYNGGNQTSKKYGVAPPTPEQYI 397          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: ETP44713.1 (hypothetical protein F442_08745 [Phytophthora parasitica P10297])

HSP 1 Score: 72.0 bits (175), Expect = 1.900e-9
Identity = 46/134 (34.33%), Postives = 70/134 (52.24%), Query Frame = 0
Query:    4 DSRIEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIR------NTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFLEER 132
            DS+I +R+        + Y ++ D A+G    ++ P+    A EVE++       N  +SRVRV+ E + G +T   +A+ F +  RVG   V     VG FL N  TC +GGN I ++FG  PP+L  +L  R
Sbjct:  211 DSKISERIRN--DSRFQQYMIYGDQAYGNDDVLTSPY----AGEVENLSREQRQVNVSMSRVRVSAEWSYGQVTNYWTALDFKQQARVGIQLVGLMYRVGVFLTNSITCTQGGNTISDYFGLAPPSLSVYLNTR 338          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_018288989.1 (hypothetical protein PHYBLDRAFT_171021 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD70949.1 hypothetical protein PHYBLDRAFT_171021 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 72.0 bits (175), Expect = 1.900e-9
Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = 0
Query:   14 FCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            F    G  Y L+ DPA+ A   +  PFR   A E E   N  +S VR++VE    H     + + + +T+R G   V    +VG FL+N+  C  GGNQ  + +G  PPT E ++
Sbjct:  283 FTSINGPCYYLYGDPAYTASDHMMIPFRRQTADEQELAINKSMSAVRISVEHEFAHSGSLWAFLKYSQTQRSGQSPVGLYYIVGTFLKNLHVCYNGGNQTSKKYGVAPPTPEQYI 397          
BLAST of NO14G02360 vs. NCBI_GenBank
Match: XP_009823776.1 (hypothetical protein H257_01995 [Aphanomyces astaci] >ETV86977.1 hypothetical protein H257_01995 [Aphanomyces astaci])

HSP 1 Score: 70.9 bits (172), Expect = 4.100e-9
Identity = 39/109 (35.78%), Postives = 56/109 (51.38%), Query Frame = 0
Query:   20 RDYKLFVDPAFGALRFISKPFRHTVATEVESIRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFLRNVWTCVRGGNQILEFFGWCPPTLEYFL 129
            R + ++ DPA+G    ++ PF     T  +   N  ISRVR++VE + G + Q    V F +  R+G+  + K   V   L N  TC RG N    +FG  PPTLE +L
Sbjct:  129 RGFVIYGDPAYGYSDQLASPFGGARLTAAQREVNKSISRVRISVEWSFGQVLQYWPIVDFKKKSRIGNSPIAKMYKVAVLLTNCITCDRGRNTNSAYFGLPPPTLEEYL 237          
The following BLAST results are available for this feature:
BLAST of NO14G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008917000.18.900e-1236.15hypothetical protein PPTG_24854 [Phytophthora para... [more]
ETI49993.12.000e-1135.38hypothetical protein F443_06365 [Phytophthora para... [more]
ETP15685.12.000e-1135.38hypothetical protein F441_09609 [Phytophthora para... [more]
ETP27956.12.000e-1136.15hypothetical protein F442_22758 [Phytophthora para... [more]
XP_008902203.13.400e-1136.00hypothetical protein PPTG_09097 [Phytophthora para... [more]
XP_018295260.12.200e-1034.58hypothetical protein PHYBLDRAFT_165708 [Phycomyces... [more]
XP_018287345.14.900e-1034.78hypothetical protein PHYBLDRAFT_149704 [Phycomyces... [more]
ETP44713.11.900e-934.33hypothetical protein F442_08745 [Phytophthora para... [more]
XP_018288989.11.900e-934.78hypothetical protein PHYBLDRAFT_171021 [Phycomyces... [more]
XP_009823776.14.100e-935.78hypothetical protein H257_01995 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02360.1NO14G02360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590402gene_5815Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02360.1NO14G02360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02360 ID=NO14G02360|Name=NO14G02360|organism=Nannochloropsis oceanica|type=gene|length=1618bp
AATTCAAGAAAAGAAGGGGAGTGTTGTGGGTGGGGGAGGGGGTAATTTTG
GTGGGGTTGTGCACGGCTTTAAGTATCTGATCATCCCTCTCCCGTCGGTC
TGGTGGAGGAAGACGCTGGACCCTACCCTGGCCGCATTTCCGACAGCGCT
ATGGTTTTGGATTCGCGCATCGAGAAGCGCTTGGCTGGCTTTTGTGGCCA
GGAGGGGCGGGATTACAAATTATTTGTGGACCCAGCTTTCGGTGCTTTGC
GTTTCATCTCGAAGCCATTCAGGCACACTGTAGCGACGGAGGTTGAGTCC
ATCAGAAACACGCGCATTTCGCGCGTGCGCGTGACTGTGGAGCAAACAAT
AGGGCACATTACGCAGCAGCTTTCGGCCGTTGTTTTCGTACGAACAGAGC
GTGTCGGCGACGGGGATGTGTGCAAGAGAAACCTCGTCGGTTGCTTCTTG
CGCAACGTTTGGACGTGCGTGCGGGGAGGGAACCAAATCTTGGAGTTCTT
TGGGTGGTGCCCGCCGACACTTGAGTATTTTTTGGAAGAACGACAATTCC
GCGATCCTCTCCCACCCCGCCTGGAGCAAATGGGTGTCTTTCAACTACGG
ACATCAGAAGAACAAGAAGATGAGTGAGACAAAAGAAATTATTCGTACTA
CGTATGCGACATAACATTCGTGTTTCACTTCTTTCGTTTCATGCATCTAT
CGATCCTACACCTCGTCGTCGCCGGCACTGTACAGCTTCTCCCACCGCCT
CTTCATGAGGCGGGGGAGCGCGGCCGCAGTCAAATTAGAGTCCAGCATGA
GCTTATGGAGCTTCACCAATTGCTCCAGGTTCTCTTCATTTTTTTCTTCC
TATCCTCCTCCTCCCATTCCTCTTCTATCTTCTTACTTTCCACTTCAATC
GTCATTAAATTTAATATGGCTTCGATGGGCTCGGCTATCTTCATCTTCTC
GTCAATTGTCTTTTGACGCTTTATGAATACAGTCGCCATCGCCCTTTGTC
TCTTCCCCCGATCATTCCGCTTATGCACGCCGCCCCAGTCGGCGGTTGAG
ACACCCGACGATGACAGGGAGGCTTCGCAGTCTTCATCCTCCTCCGTCCC
ATACTCTTCATCCTATTCCTCCTTCTCCTCTTCCTCCTTCTCCTCGTTAT
CCCCCTTCCCCCCCACCTTATTCCTGAAACTGCTACGGAGGGAGTAAGTG
GGTGGGTGGGTGAATGTGTATGCGTGCTTGTGCGTGAGTGTGTGAGCGGG
TGGGTGAGTGACATCCCAAACACCACGATTTAACGTCTGAAAGACAATCA
CTTTCTTACCTGATGTACATATGTGGCTTTTTTATCGGTCTCCGCATCGC
TATGCCAACAGCAAGAGCCAGAAGGCGCCGCCGCCTACGGATCTGCTGTC
CGCGCGCCAGGCCATAGTGGAATCATCAAGGCGCCCGCGGCACGCTCCGT
TGGTTGCCGTTCGCCATTAGCCAAGCGCCGAGTAGAACGTGTGACCTCTT
CATGCTCCCGATTTAAATCCCTCTATTCCGTCTGGGCCATGGTTTGATCG
AAAATCACCATTTAATGGCCTTGTTGTACCTCCGCCGTTTTCTTAGTCCG
GAACGGTCTCTTTTCCGG
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protein sequence of NO14G02360.1

>NO14G02360.1-protein ID=NO14G02360.1-protein|Name=NO14G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=159bp
MVLDSRIEKRLAGFCGQEGRDYKLFVDPAFGALRFISKPFRHTVATEVES
IRNTRISRVRVTVEQTIGHITQQLSAVVFVRTERVGDGDVCKRNLVGCFL
RNVWTCVRGGNQILEFFGWCPPTLEYFLEERQFRDPLPPRLEQMGVFQLR
TSEEQEDE*
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Synonyms
Publications