NO14G02340, NO14G02340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_009841269.1 (hypothetical protein H257_14997 [Aphanomyces astaci] >ETV69412.1 hypothetical protein H257_14997 [Aphanomyces astaci]) HSP 1 Score: 132.9 bits (333), Expect = 1.200e-27 Identity = 75/191 (39.27%), Postives = 108/191 (56.54%), Query Frame = 0 Query: 21 VKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVG--NVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWMASETVA 210 V +HPVVVF ILD Y RR E R+IGTLLG V VV + N+F VPH EK ++VA+G+DYHR M R+N E +VGWYAT G +N NS +IH FY+ A VH+V D ++ ++I ++S+A+ ++ +AN F QVK+ + E + L+ M + + + +E A Sbjct: 15 VNIHPVVVFQILDRYLRRAE-DQERIIGTLLGVVDSEHGVVTVSNSFPVPHLEKGDDVAVGKDYHRQMLLLHQRVNPNEVVVGWYATASADGSVVNENSCLIHDFYSAEC------AAPVHIVTDTSLRGDNLNISGFISSALTVADVALANQFKQVKVQTKTYEAESIALNVMAKASTAALSSLPTELEA 198
BLAST of NO14G02340 vs. NCBI_GenBank
Match: OQR88071.1 (eukaryotic translation initiation factor 3 subunit F [Achlya hypogyna]) HSP 1 Score: 132.1 bits (331), Expect = 2.100e-27 Identity = 81/191 (42.41%), Postives = 115/191 (60.21%), Query Frame = 0 Query: 21 VKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVG--NVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWMASETVA 210 V VHPVVVF ILD + RR + RVIGTLLG V VV I N+F VPH EK +EVA+G+DYHR M R+N E +VGWYAT+ A+N NS +IH FY+ A VH+VVD ++ + ++I ++S+A++++ +AN F QVK++ + E + LD M + + E A + S+ A Sbjct: 13 VHVHPVVVFQILDRFLRRAQ-DQKRVIGTLLGVVDAEHGVVTISNSFPVPHLEKGDEVAVGKDYHRQMLLLHQRVNPNEVVVGWYATSTT-AEAINENSCLIHEFYSAEC------ATPVHVVVDTSLQTDNLNIMGFISSALSVADVALANQFKQVKVETKTYEAEAIALDVMAK-RSSEAASLPSDLEA 194
BLAST of NO14G02340 vs. NCBI_GenBank
Match: PVD35283.1 (hypothetical protein C0Q70_06565 [Pomacea canaliculata]) HSP 1 Score: 132.1 bits (331), Expect = 2.100e-27 Identity = 73/183 (39.89%), Postives = 107/183 (58.47%), Query Frame = 0 Query: 18 NVHVKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREK 201 N+ K+HPVV F I+D Y RR E RVIGTLLG VVE+ N F VPH E E+EVA+ DY R+MY ++N E IVGWY+T LE ++ +S++IH +Y+ A +HL VD + G++ +KAY+ST + + G +F V+++ S PE+ L+ + +G+ K Sbjct: 59 NLVCKIHPVVYFSIIDSYERRNEDSK-RVIGTLLGVYDKGVVEVTNCFAVPHNESEDEVAVDIDYARSMYELHRKVNSSETIVGWYSTGLE----VSVHSVLIHEYYSREA------RSPIHLTVDTFMRGGKMGMKAYISTTIGVPGKTTGTMFTPVQVETTSYDPEQTGLEVLQQGKFNPK 230
BLAST of NO14G02340 vs. NCBI_GenBank
Match: GAX92451.1 (eukaryotic translation initiation factor 3 subunit F, putative, partial [Pythium insidiosum]) HSP 1 Score: 131.3 bits (329), Expect = 3.600e-27 Identity = 78/204 (38.24%), Postives = 112/204 (54.90%), Query Frame = 0 Query: 6 STADALFVDNVQNVHVKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWMASETVA 210 S A+ L + KVHPVVVF ILD RR E RVIGTLLG + V EI N+F VPH +EVA+G+DYH MY R+N+ E IVGWYATT G L+ S +IH FY ++ VHLVVD ++ + ++++ A+VS+ + + N F Q+++ + PE + L+ M ++ + A E + Sbjct: 2 SAANQLLLSTEAVCEAKVHPVVVFQILDRALRRSEEQD-RVIGTLLGRIENGVAEITNSFAVPHLVNGDEVAVGKDYHTQMYELHQRVNENEIIVGWYATTANGA-LLDDYSCLIHEFYGSVCENP------VHLVVDTSLRADQLNVSAFVSSPLELVENAAVNQFKQIQVQQKVSEPEAIALNAMATSDKKTQGEDAREVTS 197
BLAST of NO14G02340 vs. NCBI_GenBank
Match: OQS00143.1 (eukaryotic translation initiation factor 3 subunit F [Thraustotheca clavata]) HSP 1 Score: 128.6 bits (322), Expect = 2.400e-26 Identity = 80/195 (41.03%), Postives = 112/195 (57.44%), Query Frame = 0 Query: 21 VKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVG--NVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWMASETVATVLP 214 V VHPVVVF +LD + RR E RVIGTLLG V VV I N+F VPH EK +EVA+G+DYHR M R+N E +VGWYAT+ + +N NS +IH FY+ VH+VV+ ++AS +++ A+ S+A+ ++ +AN F QVK++ + E + L+ M + T AT LP Sbjct: 1533 VHVHPVVVFQVLDRFLRRAE-DQKRVIGTLLGLVDAEHGVVTITNSFPVPHLEKGDEVAVGKDYHRQMLLLHQRVNPNEVVVGWYATSSD-SEPINENSCLIHDFYSSECPSP------VHVVVNTSLASDSLNLMAFTSSALQVADVALANQFKQVKVETKTYEAEAIALNLMAK----------RSTEATTLP 1709
BLAST of NO14G02340 vs. NCBI_GenBank
Match: OEU09516.1 (hypothetical protein FRACYDRAFT_271363 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 127.9 bits (320), Expect = 4.000e-26 Identity = 71/177 (40.11%), Postives = 105/177 (59.32%), Query Frame = 0 Query: 31 ILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGR-------ALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREK 201 +LDH+ RR E RVIGTLLG G VE+ N F VPHAE+ +EVA+G+D+++ M + R N KE +VGWYA+ G + + S +IH FYA +D G VHLVVD + ++ + Y ST V + G P+AN+FH+++L + ++ PE + L RM+ + +K Sbjct: 4 VLDHHTRRQEASG-RVIGTLLGRRDGKKVEVTNCFAVPHAERGDEVAIGKDFNKQMLALHLRANRKETVVGWYASAALGDEDNEEVPDLIANTSSLIHEFYAEESDEGDP----VHLVVDTRLIEDAITARVYRSTPVVVQGEPMANMFHELRLTLKNSEPETLALHRMVADSKGKK 175
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_005092932.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit F-like [Aplysia californica]) HSP 1 Score: 127.5 bits (319), Expect = 5.200e-26 Identity = 69/179 (38.55%), Postives = 107/179 (59.78%), Query Frame = 0 Query: 22 KVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREK 201 KVHPVV F ++D Y RR E RVIGTLLGTV VVE+ N F VPH E ++EVA+ +Y R M+ ++N E IVGW++T G ++ +S++IH +Y+ + VHL VD + G++SIK Y ST + + G +F V+++ ++ PE+V ++ + +G+ +K Sbjct: 9 KVHPVVFFSVIDAYERRNEDAK-RVIGTLLGTVDKGVVEVTNCFAVPHNESDDEVAVDIEYARNMFELHKKVNSNEAIVGWFST----GWEVSVHSVLIHDYYSRETKNP------VHLTVDTIMRGGKMSIKGYHSTLIGVPGKTTGTMFTPVQVETITYDPEQVGVETLQKGKYNQK 176
BLAST of NO14G02340 vs. NCBI_GenBank
Match: PKA62400.1 (Eukaryotic translation initiation factor 3 subunit F [Apostasia shenzhenica]) HSP 1 Score: 127.5 bits (319), Expect = 5.200e-26 Identity = 75/187 (40.11%), Postives = 105/187 (56.15%), Query Frame = 0 Query: 5 GSTADALFVDNVQNVHVKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTV-VGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLD 191 GS F + V ++HPVV+F I D Y RRP+ RVIGTLLG+V +EI N++ VPH E ++VAL DYH +Y+ ++N KE IVGWY+T G ++ S +IH FY+ A VHL VD +G SIKAYVS +++ P+A F+++ LD+ E+V D Sbjct: 4 GSKTTLQFHPSTATVSARIHPVVLFNICDCYVRRPDQAE-RVIGTLLGSVSTDGTIEIKNSYAVPHNESADQVALDIDYHHTLYASHQKVNPKEVIVGWYST----GCDVSGGSALIHEFYSREV------ANPVHLTVDTGFTNGEASIKAYVSFNLSLGDRPLAAQFNEIPLDLRMIEAERVGFD 179
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_009403465.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit F [Musa acuminata subsp. malaccensis]) HSP 1 Score: 126.7 bits (317), Expect = 9.000e-26 Identity = 74/179 (41.34%), Postives = 101/179 (56.42%), Query Frame = 0 Query: 19 VHVKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGAR-------LVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLD 191 V ++HPVV+F I D Y RRP+ RVIGTLLGTV G VVEI N++ VPH E ++VAL +YHR MY ++N KE +VGWY+T G ++ S +IH FY R VHL VD ++G SIKAY+S +++ +A F ++ LD+ E+V D Sbjct: 14 VSARLHPVVLFSICDCYVRRPDQAD-RVIGTLLGTVSGGVVEIKNSYAVPHNESADQVALDVEYHRNMYMSHLKVNPKEVLVGWYST----GFGVSGGSALIHDFYVKELKDSTKDIREAQNSVPPVHLTVDTVFSNGEASIKAYMSVNLSLGDRSLAAQFQEIPLDLRMIEAERVGFD 187
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_021352187.1 (eukaryotic translation initiation factor 3 subunit F-like [Mizuhopecten yessoensis] >OWF51165.1 Eukaryotic translation initiation factor 3 subunit F [Mizuhopecten yessoensis]) HSP 1 Score: 126.7 bits (317), Expect = 9.000e-26 Identity = 72/190 (37.89%), Postives = 108/190 (56.84%), Query Frame = 0 Query: 18 NVHVKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWMASET 208 N+ +VHPVV+F I+D Y RR E RVIGTLLG VE+ N F VPH E E+EVA +Y R MY ++N E IVGWY+T G ++ +S++IH +YA A VHL VD + ++ +KAY+ST + + + +F V+++ ++ PE+V +D + +G+ K +A T Sbjct: 4 NLVCRVHPVVLFSIIDSYERRNEDAK-RVIGTLLGVYDKGAVEVTNCFAVPHNESEDEVAADLEYARNMYELHKKVNAAEVIVGWYST----GSEVSEHSVLIHEYYAREAKSP------VHLTVDTTLKGSKMDVKAYISTPIGVPNKTMGCMFTAVQVETITYTPERVGVDLIQQGKLNPKRSVAMVT 182 The following BLAST results are available for this feature:
BLAST of NO14G02340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G02340 ID=NO14G02340|Name=NO14G02340|organism=Nannochloropsis oceanica|type=gene|length=672bpback to top protein sequence of NO14G02340.1 >NO14G02340.1-protein ID=NO14G02340.1-protein|Name=NO14G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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