NO14G02340, NO14G02340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G02340 vs. NCBI_GenBank
Match: EWM24586.1 (JAB1/Mov34/MPN/PAD-1 [Nannochloropsis gaditana]) HSP 1 Score: 330.5 bits (846), Expect = 4.100e-87 Identity = 171/220 (77.73%), Postives = 183/220 (83.18%), Query Frame = 0 Query: 1 MALQGSTADALFVDNVQNVHVKVHPVVVFGILDHYNRRPE----PGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWMASETVATVLPGGG 217 MALQGSTADALFVD+VQNVHV+VHPVV+FGILDHYNRRPE +IHNAFGVPHAE NEVALGQDYHR MY+ FTRINDKERIVGWYATTLE GRALNSNSIIIHGFYAGN+D A GARLVHLVVDAAVASGRV+IKAYVSTAV+ISGAPVANIFHQVK+ VVSTAPE+VCLDRM+RGQ REKAW S+T A VLPGGG Sbjct: 1 MALQGSTADALFVDSVQNVHVEVHPVVIFGILDHYNRRPEXXXXXXXXXXXXXXXXXXXXXXXQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLEEGRALNSNSIIIHGFYAGNSD--AAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGG 218
BLAST of NO14G02340 vs. NCBI_GenBank
Match: CBN74067.1 (translation initiation factor eIF3 f subunit [Ectocarpus siliculosus]) HSP 1 Score: 183.7 bits (465), Expect = 6.200e-43 Identity = 94/194 (48.45%), Postives = 137/194 (70.62%), Query Frame = 0 Query: 18 NVHVKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWMASETVATV 212 ++ VKVHP+V+F +LDHY RRPE RVIGTLLGTV NVVEI N+F VPH EK +EVA+G+D++++M + R+N +E +VGWYAT+ +G ++ +S +IH FY G + R VHLVVD A+ + V KA++ST + I G+ +AN+FH+VK+ +VS E++C+DRM++GQ E+A+ E +A V Sbjct: 46 DIVVKVHPMVLFSVLDHYLRRPE-NQKRVIGTLLGTVTANVVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGVLIVDDSS-LIHDFYTGECE------RPVHLVVDTALKNNIVGCKAFISTPLEIDGSALANVFHEVKVSLVSAEAERICIDRMVKGQ--EEAFTTPEGLAEV 229
BLAST of NO14G02340 vs. NCBI_GenBank
Match: EJK73701.1 (hypothetical protein THAOC_04661 [Thalassiosira oceanica]) HSP 1 Score: 159.8 bits (403), Expect = 9.500e-36 Identity = 85/185 (45.95%), Postives = 119/185 (64.32%), Query Frame = 0 Query: 14 DNVQNVHVKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEG-----GRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMI 194 ++V V VHP+V+ +LDH+ RR E G RVIGTLLG G+ VEI N+F VPHAE+ +EVA+G+D++R M S R N +E +VGWYAT L + S +IH FYAG D +HLVVD A+ + ++++AY ST V I G P+AN+FH+++L V S+ E++C+DRMI Sbjct: 35 ESVPACQVNVHPLVLLSVLDHHTRRQE-GAGRVIGTLLGKRNGDTVEITNSFAVPHAERGDEVAIGKDFNRQMLSLHLRANPRETVVGWYATALPDEATGESHCIADTSSLIHEFYAGECDDDP-----IHLVVDTALKADAIALRAYKSTPVVIKGEPLANMFHEIRLSVRSSEAERICVDRMI 213
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_002296908.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED86636.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 155.2 bits (391), Expect = 2.400e-34 Identity = 82/200 (41.00%), Postives = 123/200 (61.50%), Query Frame = 0 Query: 21 VKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEG--------GRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWMASETVATVL 213 V VHP+V+ +LDH+ RR E G RVIGTLLG G+ VEI N F VPHAE+ +EVA+G+D++R M + R N +E ++GWYAT L + + S +IH FYA + +HLVVD ++ + ++++AY ST V++ G P+AN+FH+++L V S+ E++C+DRMIR + AS+ + L Sbjct: 1 VLVHPIVLLSVLDHHTRRQE-GAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRETVIGWYATALPDENDPVNGESKCIADTSSLIHEFYATECEDDP-----IHLVVDTSLETDAMALRAYKSTPVSVKGEPLANLFHEIRLAVKSSESERICVDRMIRSASSAEGAPASQDESAAL 194
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_002178743.1 (COP9 SigNalosome subunit 6, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC49441.1 COP9 SigNalosome subunit 6, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 153.7 bits (387), Expect = 6.800e-34 Identity = 82/179 (45.81%), Postives = 112/179 (62.57%), Query Frame = 0 Query: 21 VKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEG-----GRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIR 195 V VHPVV+ +LDH+ RR E RVIGTLLG GNVVE+ N F VPHAE+ EVA+G+D+++ M R N KE +VGWYA+ G G + S +IH FYAG AD G VHLVVD + +S++A+ S+ + + G + N+FH++KL + S PE +CL++MIR Sbjct: 1 VIVHPVVLLHVLDHHTRRQEESG-RVIGTLLGRQNGNVVEVTNCFSVPHAERGEEVAIGKDFNKTMLGLHLRANRKETVVGWYASAANGDSESNGDLITDTSSLIHDFYAGEADEGDP----VHLVVDTRLKEDSLSMRAFKSSQIVVQGEAMGNLFHELKLSLKSNEPEAICLNQMIR 174
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_008874547.1 (hypothetical protein H310_10078 [Aphanomyces invadans] >ETV96770.1 hypothetical protein H310_10078 [Aphanomyces invadans]) HSP 1 Score: 134.8 bits (338), Expect = 3.300e-28 Identity = 78/191 (40.84%), Postives = 106/191 (55.50%), Query Frame = 0 Query: 21 VKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVG--NVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWMASETVA 210 V VHPVVVF ILD Y RR E R+IGTLLG V VV + N+F VPH EK ++VA+G+DYHR M R+N E +VGWY T G LN NS +IH FY+ A VHLV D + + I ++S+A+ ++ +AN F QVK+ + E + LD M++ E + ++ A Sbjct: 16 VNVHPVVVFQILDRYLRRAE-DQERIIGTLLGVVDSEHGVVTVSNSFPVPHLEKGDDVAVGKDYHRQMLLLHQRVNPNEVVVGWYTTASADGSILNENSCLIHEFYSTEC------ATPVHLVTDTTLRGDSLDISGFISSALTVADVALANQFKQVKVVTKTYEAEAIALDAMVKASTAETTSLPTDLEA 199
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_013091294.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit F-like [Biomphalaria glabrata]) HSP 1 Score: 134.0 bits (336), Expect = 5.600e-28 Identity = 74/186 (39.78%), Postives = 113/186 (60.75%), Query Frame = 0 Query: 18 NVHVKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQEREKAWM 204 N+ KVHPVV+F I+D Y RR E RVIGTLLG +VVEI N F VPH E E+EVA+ +Y R MY ++N E IVGW++T G ++ +S++IH +Y+ A + +HL VD V G++ IKAY ST++ + G +F V+++ +S PE+V ++ + +G+ +K ++ Sbjct: 4 NLVCKVHPVVLFSIIDAYERRNEDAK-RVIGTLLGVAEKSVVEITNCFAVPHNESEDEVAVDIEYARNMYELHKKVNSNETIVGWFST----GSEVSVHSVLIHDYYSREAKNP------IHLTVDTFVRGGKMGIKAYHSTSIGVPGKTTGTMFTPVQVETISYDPEQVGVEVLQKGKHPQKRFV 178
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_009040210.1 (hypothetical protein AURANDRAFT_13838, partial [Aureococcus anophagefferens] >EGB05082.1 hypothetical protein AURANDRAFT_13838, partial [Aureococcus anophagefferens]) HSP 1 Score: 133.7 bits (335), Expect = 7.300e-28 Identity = 84/182 (46.15%), Postives = 109/182 (59.89%), Query Frame = 0 Query: 21 VKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTV--VGNVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGR-VSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIRGQERE 200 V VHP+VVFGILDHY RR E G RVIGTLLG + VVE+ NA+ VPH E EVA+GQ ++++M+ +R+N +ER+VGWYAT GG + + +IH FY+ A VH+VVDA++ G+ V AY GA A F V + + EKVC+DRMIRGQ E Sbjct: 1 VIVHPIVVFGILDHYIRRQE-GQERVIGTLLGHLDEETGVVEVSNAYAVPHTESGGEVAVGQAFNKSMFGLLSRVNSEERVVGWYATG-GGGAVQDDGTALIHDFYSREC------AAPVHVVVDASLRDGKGVETAAYHRGPPGADGAAAA--FAPVPSSLTFSDGEKVCIDRMIRGQGDE 172
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_008609724.1 (hypothetical protein SDRG_05768 [Saprolegnia diclina VS20] >EQC36943.1 hypothetical protein SDRG_05768 [Saprolegnia diclina VS20]) HSP 1 Score: 133.7 bits (335), Expect = 7.300e-28 Identity = 79/176 (44.89%), Postives = 108/176 (61.36%), Query Frame = 0 Query: 21 VKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVG--NVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIR 195 V VHPVVVF ILD + RR E RVIGTLLG V VV I N+F VPH EK +EVA+G+DYHR M R+N E +VGWYAT+ A+N NS +IH FY+ A VH+VVD ++ S ++I ++S+A++++ +AN F QVK++ + E + LD M + Sbjct: 13 VHVHPVVVFQILDRFLRRGE-DQKRVIGTLLGVVDAEHGVVTISNSFPVPHLEKGDEVAVGKDYHRQMLLLHQRVNPNEVVVGWYATSTT-AEAINENSCLIHEFYSSEC------ASPVHVVVDTSLESDNLNIMGFISSALSVADVALANQFKQVKVETKTYEAESIALDVMAK 180
BLAST of NO14G02340 vs. NCBI_GenBank
Match: XP_012196641.1 (hypothetical protein SPRG_02688 [Saprolegnia parasitica CBS 223.65] >KDO32997.1 hypothetical protein SPRG_02688 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 133.7 bits (335), Expect = 7.300e-28 Identity = 78/176 (44.32%), Postives = 108/176 (61.36%), Query Frame = 0 Query: 21 VKVHPVVVFGILDHYNRRPEPGPVRVIGTLLGTVVG--NVVEIHNAFGVPHAEKENEVALGQDYHRAMYSHFTRINDKERIVGWYATTLEGGRALNSNSIIIHGFYAGNADHGAGGARLVHLVVDAAVASGRVSIKAYVSTAVNISGAPVANIFHQVKLDVVSTAPEKVCLDRMIR 195 V +HPVVVF ILD + RR E RVIGTLLG V VV I N+F VPH EK +EVA+G+DYHR M R+N E +VGWYAT+ A+N NS +IH FY+ A VH+VVD ++ S ++I ++S+A++++ +AN F QVK++ + E + LD M + Sbjct: 13 VHIHPVVVFQILDRFLRRSE-DQKRVIGTLLGVVDAEHGVVTISNSFPVPHLEKGDEVAVGKDYHRQMLLLHQRVNPNEVVVGWYATSTT-AEAINENSCLIHEFYSSEC------ASPVHVVVDTSLESDNLNIMGFISSALSVADVALANQFKQVKVETKTYEAESIALDVMAK 180 The following BLAST results are available for this feature:
BLAST of NO14G02340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G02340 ID=NO14G02340|Name=NO14G02340|organism=Nannochloropsis oceanica|type=gene|length=672bpback to top protein sequence of NO14G02340.1 >NO14G02340.1-protein ID=NO14G02340.1-protein|Name=NO14G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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