NO14G01980, NO14G01980 (gene) Nannochloropsis oceanica

Overview
NameNO14G01980
Unique NameNO14G01980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2333
Alignment locationchr14:605049..607381 +

Link to JBrowse

Properties
Property NameValue
DescriptionGtp-binding protein parf
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:605049..607381 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
Homology
BLAST of NO14G01980 vs. NCBI_GenBank
Match: EWM24659.1 (gtp-binding protein parf [Nannochloropsis gaditana])

HSP 1 Score: 436.8 bits (1122), Expect = 1.300e-118
Identity = 312/755 (41.32%), Postives = 400/755 (52.98%), Query Frame = 0
Query:    1 MGNEVSFAGTSSTSAATEDERRKAIRRMDGDLQKKLGKGIAHNLKLVLKGERGSGKSALLSRLKGQSFTSS-YEPTPEIQTATISWSAKEEGEIVKVEVWDVVDKGLGRRGSSDGDKTGSCG----GGGVAPDALAGIPLDLPAQI---HRASGSGSHSFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLLLNFRDL-----QPAGEDKQDIAEAQERVRRSTNLHRPVHVHLETLQAMAREERAKRRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQMEQTRRELGEATREVEDAMTRESWGAYIATFGKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKAPIKAPMLITRSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLADVDDFKFQP---NEQSELDLFLADGEGTEEEGALDEEQKEAEGRRLSLTSCLKPGSLGSLSKAERRAAGIAVGNXXXXXXXXXXXXXXXXGQDAVVAEIGEQRYVGLRPVTLSSQSLSPSTSVPEQVNMLSSATGRRGKKDEEN--------------------AEKEPKEDDEFDVPAGLPNNSFVGDLSW--DEEEEECGIGVMGM-----GCSTNRSSKTPLNSSATAGTDASLTS------XXXXXTNVVLSEAARAAIAATMQELGEVVRPGGEEVGEAIEGGE 707
            MGN+VS   +S TS  +E++RR+AIRRMDG LQKKLGKG+AHNLK++++GERGSGKSALLSRLKGQ FTSS YEPTPEI+TATI+WSAKE+G +VKVE+WDVVDKGLGRRGS  G+     G     GG  PDALAG+PLD+P      H A  SGSH+FGVLDATI+DVWKG+HGG+F++NPFS+TAL Y+QKQLAEVP  IPVLLL NFRDL     Q   + ++D     E V  +    R VH +L  LQ ++ E+ A+ R CH+FACSMQNCFGL  L+AY+N+PF+ MK + L RQ+ +TRR L   T EVE+ + R SWG Y+A    KE                              V     +    +TRS G                                                                                L DV+DFKFQP   NEQ+EL LFLA+ EG   E  ++EE+     RR SL SCLKPGSL SLS+A+RRA G+ VG+                  + + AE GEQRYVGLRPV L ++ +S S          ++  G+    D++                       KE    D+ D+PAGLP      DLS     E E+C  G+        G S+ + +   +  S ++ +++S T+           T+ VLS+AARAAIAATM+EL       G   GE +  G+
Sbjct:    1 MGNDVS---SSITSIRSEEDRRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKE----EDHAPVIEKSNKEARKPQSVRVLPDTVVPGTSRENTGVTRSKGEGHKPVGHVSSPAAAVASKHPRPIQGDPQAWPGVTCRSTQGPQRSSVQESG-----------------------------LVDVEDFKFQPREGNEQNELTLFLAEAEGGSTEDDMNEER-----RRQSLRSCLKPGSLASLSEAQRRATGV-VGSGDVREGDEGEE------DEDLPAEEGEQRYVGLRPVNLPAKDISLSE------RGCNADRGKGSLSDDQKKGLVGPLSVHEDGLGVWMTAQGKESDGKDDIDIPAGLPLPLHSLDLSQADSSEGEDCDQGIFNRKIQQPGDSSLQRTGNNMEGSLSSFSNSSTTAAPLPLEGLADKTDFVLSKAARAAIAATMEEL------NGRSPGEDLANGD 695          
BLAST of NO14G01980 vs. NCBI_GenBank
Match: XP_005854925.1 (gtp-binding parf-like protein, partial [Nannochloropsis gaditana CCMP526] >XP_005856138.1 gtp-binding parf-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU20228.1 gtp-binding parf-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU21440.1 gtp-binding parf-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 275.8 bits (704), Expect = 4.000e-70
Identity = 141/194 (72.68%), Postives = 163/194 (84.02%), Query Frame = 0
Query:   21 RRKAIRRMDGDLQKKLGKGIAHNLKLVLKGERGSGKSALLSRLKGQSFTSS-YEPTPEIQTATISWSAKEEGEIVKVEVWDVVDKGLGRRGSSDGDKTGSCG----GGGVAPDALAGIPLDLPAQI---HRASGSGSHSFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLLLNFRDL 207
            RR+AIRRMDG LQKKLGKG+AHNLK++++GERGSGKSALLSRLKGQ FTSS YEPTPEI+TATI+WSAKE+G +VKVE+WDVVDKGLGRRGS  G+     G     GG  PDALAG+PLD+P      H A  SGSH+FGVLDATI+DVWKG+HGG+F++NPFS+TAL Y+QKQLAEVP  IPVLLL NFRDL
Sbjct:    1 RRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDL 194          
BLAST of NO14G01980 vs. NCBI_GenBank
Match: XP_005854920.1 (ras superfamily gtpase, partial [Nannochloropsis gaditana CCMP526] >XP_005856132.1 ras superfamily gtpase, partial [Nannochloropsis gaditana CCMP526] >EKU20222.1 ras superfamily gtpase, partial [Nannochloropsis gaditana CCMP526] >EKU21435.1 ras superfamily gtpase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 160.6 bits (405), Expect = 1.900e-35
Identity = 158/512 (30.86%), Postives = 215/512 (41.99%), Query Frame = 0
Query:  231 RPVHVHLETLQAMAREERAKRRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQMEQTRRELGEATREVEDAMTRESWGAYIATFGKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKAPIKAPMLITRSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLADVDDFKFQP---NEQSELDLFLADGEGTEEEGALDEEQKEAEGRRLSLTSCLKPGSLGSLSKAERRAAGIAVGNXXXXXXXXXXXXXXXXGQDAVVAEIGEQRYVGLRPVTLSSQSLSPSTSVPEQVNMLSSATGRRGKKDEEN--------------------AEKEPKEDDEFDVPAGLPNNSFVGDLSW--DEEEEECGIGVMGM-----GCSTNRSSKTPLNSSATAGTDASLTS------XXXXXTNVVLSEAARAAIAATMQELGEVVRPGGEEVGEAIEGGE 707
            R VH +L  LQ ++ E+ A+ R CH+FACSMQNCFGL  L+AY+N+PF+ MK + L RQ+ +TRR L   T EVE+ + R SWG Y+A    KE                              V     +    +TRS G                                                                                L DV+DFKFQP   NEQ+EL LFLA+ EG   E  ++EE+     RR SL SCLKPGSL SLS+A+RRA G+ VG+                  + + AE GEQRYVGLRPV L ++ +S S          ++  G+    D++                       KE    D+ D+PAGLP      DLS     E E+C  G+        G S+ + +   +  S ++ +++S T+           T+ VLS+AARAAIAATM+EL       G   GE +  G+
Sbjct:   10 RRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKE----EDHAPVIEKSNKEARKPQSVRVLPDTVVPGTSRENTGVTRSKGEGHKPVGHVSSPAAAVASKHPRPIQGDPQAWPGVTCRSTQGPQRSSVQESG-----------------------------LVDVEDFKFQPREGNEQNELTLFLAEAEGGSTEDDMNEER-----RRQSLRSCLKPGSLASLSEAQRRATGV-VGSGDVREGDEGEE------DEDLPAEEGEQRYVGLRPVNLPAKDISLSE------RGCNADRGKGSLSDDQKKGLVGPLSVHEDGLGVWMTAQGKESDGKDDIDIPAGLPLPLHSLDLSQADSSEGEDCDQGIFNRKIQQPGDSSLQRTGNNMEGSLSSFSNSSTTAAPLPLEGLADKTDFVLSKAARAAIAATMEEL------NGRSPGEDLANGD 464          
BLAST of NO14G01980 vs. NCBI_GenBank
Match: OQR84199.1 (GTP-binding protein Parf [Achlya hypogyna])

HSP 1 Score: 160.2 bits (404), Expect = 2.400e-35
Identity = 100/327 (30.58%), Postives = 160/327 (48.93%), Query Frame = 0
Query:    1 MGNEVSFAGTSSTSAATEDERRKAIRRMDGDLQKKLGKGIAHNLKLVLKGERGSGKSALLSRLKGQSFTSSYEPTPEIQTATISWSAKEEGEIVKVEVWDVVDKGLGRRGSSDGDKTGSCGGGGVAPDALAGIPLDLPAQIHRASGSGSHSFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLLLNFRDLQPAG---------EDKQDIAEAQERVRRSTNLHRPVHVHLETLQAMAREERAKRRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQMEQTRRELGEATREVEDAMTRESWGAYIA 319
            MGNE S     +  A  +    + IRRMD  ++KK+  G+ +N+KL+++GERG+GKS+L++RL+GQ    ++EPT EIQTA+I W+     ++VK E+WDVVD                            GIP D P +       G H   ++DA  +DV++ AH  +FL++    + L Y++ QL  VP HIP L+L  FRDL+            ED Q +     +  +     RP+  H                    F  S+ NC+GL  LH Y+ +PF+ +K   +++Q+     EL     +V+ ++  + +  ++A
Sbjct:    1 MGNEGSRPADPAVQAQAD---ARTIRRMDKVIRKKVRGGLTYNMKLLIRGERGTGKSSLMARLQGQPIPQTHEPTREIQTASIQWTMATHEDMVKCELWDVVD---------------------------VGIPPDEPLEAPTPDSVGRHPVALVDAQNVDVYQNAHCVIFLMDITKYSTLEYVRAQLDHVPVHIPTLVLGTFRDLRKDDVPLKRAIFKEDVQTLLYGDHKDHKLPGFRRPLEQHY-------------------FEASLSNCYGLKALHTYLGVPFLHLKVATVKQQLRLLETELASTKAQVDVSIASQKYSDFVA 278          
BLAST of NO14G01980 vs. NCBI_GenBank
Match: XP_008618113.1 (hypothetical protein SDRG_13793 [Saprolegnia diclina VS20] >EQC28465.1 hypothetical protein SDRG_13793 [Saprolegnia diclina VS20])

HSP 1 Score: 157.9 bits (398), Expect = 1.200e-34
Identity = 100/327 (30.58%), Postives = 159/327 (48.62%), Query Frame = 0
Query:    1 MGNEVSFAGTSSTSAATEDERRKAIRRMDGDLQKKLGKGIAHNLKLVLKGERGSGKSALLSRLKGQSFTSSYEPTPEIQTATISWSAKEEGEIVKVEVWDVVDKGLGRRGSSDGDKTGSCGGGGVAPDALAGIPLDLPAQIHRASGSGSHSFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLLLNFRDLQPAG---------EDKQDIAEAQERVRRSTNLHRPVHVHLETLQAMAREERAKRRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQMEQTRRELGEATREVEDAMTRESWGAYIA 319
            MGNE S         A  D   K IRRMD  ++KK+  G+ +N+KL+++GERG+GK++L++RL+GQ    ++EPT EIQTA+I W+ +   + VK E+WDVVD                            GIP + P +       G H   ++DA  +DV++ AH  +FL++    + L Y++ QL  VP HIP L+L  FRDL+            +D Q +     +  +     RP  VH                    F  S+ NC+GL  LH Y+ +PF+ +K   +++Q+     EL     +V+ ++  + +  ++A
Sbjct:    1 MGNESSRPAVDPAVQAQAD--AKTIRRMDKVIRKKVRGGLTYNMKLLIRGERGTGKTSLMARLQGQPIPPTHEPTREIQTASIQWTMQTHEDTVKCELWDVVD---------------------------VGIPSEDPIEAPSPDAVGRHPVALVDAQAVDVYQNAHCVIFLMDITKYSTLEYVRTQLDLVPVHIPTLVLGTFRDLRKDDVTLKRAIFKDDVQTLLYGSHKDHKLPGFRRPSEVHY-------------------FEASLSNCYGLKALHTYLGVPFLHLKVATVKQQLRLLETELASTKAQVDVSIAGQKYSDFVA 279          
BLAST of NO14G01980 vs. NCBI_GenBank
Match: XP_012207531.1 (hypothetical protein SPRG_13144 [Saprolegnia parasitica CBS 223.65] >KDO21728.1 hypothetical protein SPRG_13144 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 157.9 bits (398), Expect = 1.200e-34
Identity = 99/327 (30.28%), Postives = 159/327 (48.62%), Query Frame = 0
Query:    1 MGNEVSFAGTSSTSAATEDERRKAIRRMDGDLQKKLGKGIAHNLKLVLKGERGSGKSALLSRLKGQSFTSSYEPTPEIQTATISWSAKEEGEIVKVEVWDVVDKGLGRRGSSDGDKTGSCGGGGVAPDALAGIPLDLPAQIHRASGSGSHSFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLLLNFRDLQPAG---------EDKQDIAEAQERVRRSTNLHRPVHVHLETLQAMAREERAKRRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQMEQTRRELGEATREVEDAMTRESWGAYIA 319
            MGNE S         A  D   K IRRMD  ++KK+  G+ +N+KL+++GERG+GK++L++RL+GQ    ++EPT EIQTA+I W+ +   + VK E+WDVVD                            GIP + P +       G H   ++DA  +DV++ AH  +FL++    + L Y++ QL  VP HIP L+L  FRDL+            +D Q +     +  +     RP  +H                    F  S+ NC+GL  LH Y+ +PF+ +K   +++Q+     EL     +V+ ++  + +  ++A
Sbjct:    1 MGNESSRPAVDPAVQAQAD--AKTIRRMDKVIRKKVRGGLTYNMKLLIRGERGTGKTSLMARLQGQPIPPTHEPTREIQTASIQWTMQTHEDTVKCELWDVVD---------------------------VGIPSEDPIEAPSPDAVGRHPVALVDAQAVDVYQNAHCVIFLMDITKYSTLEYVRTQLDHVPVHIPTLVLGTFRDLRKDDVALKRAIFKDDVQTLLYGSHKDHKLPGFRRPSEMHY-------------------FEASLSNCYGLKALHTYLGVPFLHLKVATVKQQLRLLETELASTKAQVDVSIAGQKYSDFVA 279          
BLAST of NO14G01980 vs. NCBI_GenBank
Match: XP_002740305.1 (PREDICTED: rab-like protein 6-like isoform X1 [Saccoglossus kowalevskii])

HSP 1 Score: 156.8 bits (395), Expect = 2.700e-34
Identity = 96/280 (34.29%), Postives = 147/280 (52.50%), Query Frame = 0
Query:   25 IRRMDGDLQKKLGKGIAHNLKLVLKGERGSGKSALLSRLKGQSFTSSYEPTPEIQTATISWSAKEEGEIVKVEVWDVVDKGLGRRGSSDGDKTGSCGGGGVAPDALAGIPLDLPAQIHRASGSGSHSFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLLLNFRDLQPAGEDKQDIAEAQERVRRSTNLHRPVHVHLETLQAMAREERAKRRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQMEQTRRELGEATREV 305
            ++ M  +LQ++  KG+ +N+K+++KG+R +GK+ L  RL+GQ F   Y PT EIQ A+I WS K   ++VKVEVWDVVDKG  R+   DG K                        I  +      S   LDA  LDV+KG HG + +++        YI+++L +VP+HIPVL+L N RD+   GE +  ++E         N  RP+        AM +   +          SM+N FGL  LH + N+PF++++ E L RQ+E  ++++     E+
Sbjct:   23 MQAMGQNLQRRFAKGVQYNMKIIIKGDRNTGKTTLFQRLQGQKFMEEYIPTQEIQVASIQWSYKNTDDVVKVEVWDVVDKGKSRK-KQDGLK------------------------IENSPDESQSSEPCLDAAFLDVYKGTHGVVMMMDMTKQWTYDYIERELPKVPNHIPVLVLSNHRDM---GEHRVILSEDVRNY--VENYERPIG------SAMIQYAES----------SMKNGFGLKYLHKFFNIPFLILQRETLMRQLETNQKDIDSTLEEL 256          
BLAST of NO14G01980 vs. NCBI_GenBank
Match: OQS07028.1 (GTP-binding protein Parf [Thraustotheca clavata])

HSP 1 Score: 155.2 bits (391), Expect = 7.800e-34
Identity = 94/319 (29.47%), Postives = 161/319 (50.47%), Query Frame = 0
Query:    1 MGNEVSFAGTSSTSAATEDERRKAIRRMDGDLQKKLGKGIAHNLKLVLKGERGSGKSALLSRLKGQSFTSSYEPTPEIQTATISWSAKEEGEIVKVEVWDVVDKGLGRRGSSDGDKTGSCGGGGVAPDALAGIPLDLPAQIHRASGSGSHSFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLLLNFRDLQPAGEDKQDIAEAQERVRRSTNLHRPVHVHLETLQAMAREERAKRRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQMEQTRRELGEATREVEDAMTRESWGAYIAT 320
            MGNE S     +   A+       IRRMD  ++KK+  G+ +N+KL+++GERG+GK++L++RL+GQ    ++ PT EIQTA+I W+ +   + +K E+WDVVD                            GIP +   ++   +  G H   ++DA  +D+++ AH  +FL++    + L Y++ QL  VP HIP L++  FRDL+        +  A  +    T L+     H         E+       H F  SM NC+GL  LH Y+ +P++ +K   +++Q+     EL     +VE ++ ++ +  +++T
Sbjct:    1 MGNEASRPDVPADKVAS-----ATIRRMDKVIRKKVRGGVTYNMKLLIRGERGTGKTSLMARLQGQPIPETHIPTREIQTASIQWTMQSHEDTIKCELWDVVD---------------------------VGIPKEEENEMEDPNAVGRHPIALVDAQSVDIYQNAHCVIFLMDITKYSTLEYVRSQLDHVPVHIPTLVIGTFRDLRKDENGGTPLKRAIFKEDVHTLLYGDHKDHKSATFRRPLEQ-------HYFEASMANCYGLKALHTYLGVPYLHLKVATVKQQLRLLETELANTKHQVEMSIAKQKYSDFVST 280          
BLAST of NO14G01980 vs. NCBI_GenBank
Match: XP_009836974.1 (hypothetical protein H257_11675 [Aphanomyces astaci] >ETV73548.1 hypothetical protein H257_11675 [Aphanomyces astaci])

HSP 1 Score: 154.8 bits (390), Expect = 1.000e-33
Identity = 111/338 (32.84%), Postives = 173/338 (51.18%), Query Frame = 0
Query:    1 MGNEVSFA-----GTSSTSAATEDERRK---AIRRMDGDLQKKLGKGIAHNLKLVLKGERGSGKSALLSRLKGQSFTSSYEPTPEIQTATISWSAK-EEGEIVKVEVWDVVDKGLGRRGSSDGDKTGSCGGGGVAPDALAGIPLDLPAQIHRASGSGSHSFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLLLNFRDLQPAG----------EDKQDIAEAQERVRRSTNLHRPVHVHLETLQAMAREERAKRRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQMEQTRRELGEATREVEDAMTRESWGAYIAT 320
            MGNE S A     G SS +A +         +IRRMD  ++KK+   I +N+KL+++GERG+GK++L++RL+G     ++ PT EI+TA+I+WS K    E VK EVWDVVD GL  +  SD            A DA     LD  +Q       G H    +DA  +DV++ AHG +FL++  +  +L Y++ QL  VP HIP L++  FRDL+ A           ED Q +     +  ++    RPV  H                    F  S+ NC+GL  LH Y+++PF+ +K   +++Q++    +L  A   V+  ++ + +  ++ T
Sbjct:    1 MGNEASRAVDLSPGPSSLAAPSSSGMSAPMGSIRRMDKVIRKKVRGEITYNMKLLIRGERGTGKTSLVARLQGLPIPETHVPTREIETASINWSMKGSSEESVKCEVWDVVDVGLTSKDDSD------------AADAAM---LDSESQ-------GRHQVAPVDAQNVDVYQNAHGVIFLMDISNYASLEYVKHQLDMVPIHIPTLIIGTFRDLRRADGEPLKRAIFKEDVQALLYGTAKDMKNPAFRRPVEQHY-------------------FEASLSNCYGLKALHTYLSIPFLHLKVATVKQQLKLLETDLATAKLNVDTTISTQKYSHFVHT 297          
BLAST of NO14G01980 vs. NCBI_GenBank
Match: XP_015778818.1 (PREDICTED: rab-like protein 6 isoform X1 [Acropora digitifera])

HSP 1 Score: 151.8 bits (382), Expect = 8.600e-33
Identity = 94/272 (34.56%), Postives = 145/272 (53.31%), Query Frame = 0
Query:   25 IRRMDGDLQKKLGKGIAHNLKLVLKGERGSGKSALLSRLKGQSFTSSYEPTPEIQTATISWSAKEEGEIVKVEVWDVVDKGLGRRGSSDG-----DKTGSCGGGGVAPDALAGIPLDLPAQIHRASGSGSHSFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLLLNFRDLQPAGEDKQDIAEAQERVRRSTNLHRPVHVHLETLQAMAREERAKRRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQME 292
            +R M   LQ+K  +GI +N+K+++KG+R +GKS L  RL+G+     Y PT EIQ A+I W+ +   ++VKVEVWDVVDKG  ++ S  G     DKT     G           L    ++      G     VLDA  +DV+KGAHG L +++        Y++++L +VP H+PVL+L N RD+   GE +  + + +E V    +L RP                 +    H    SM+N FGL  +H ++NLPF++++ E L +Q++
Sbjct:   24 VRAMGQALQRKFARGIQYNMKIIIKGDRNTGKSCLFQRLQGKPHNEEYIPTNEIQVASIHWNYRTTDDVVKVEVWDVVDKGRSKKPSLSGLKLENDKTERSTSG--------TFQLAFDGEV----SEGEKDATVLDAQFVDVYKGAHGVLMMMDMTKPWTFKYVERELNKVPPHLPVLVLANHRDM---GEHR--LVQTEEAVALIEHLERP----------------DRSPPVHYAETSMKNGFGLKYIHKFLNLPFLLLQRETLLKQLQ 262          
The following BLAST results are available for this feature:
BLAST of NO14G01980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24659.11.300e-11841.32gtp-binding protein parf [Nannochloropsis gaditana... [more]
XP_005854925.14.000e-7072.68gtp-binding parf-like protein, partial [Nannochlor... [more]
XP_005854920.11.900e-3530.86ras superfamily gtpase, partial [Nannochloropsis g... [more]
OQR84199.12.400e-3530.58GTP-binding protein Parf [Achlya hypogyna][more]
XP_008618113.11.200e-3430.58hypothetical protein SDRG_13793 [Saprolegnia dicli... [more]
XP_012207531.11.200e-3430.28hypothetical protein SPRG_13144 [Saprolegnia paras... [more]
XP_002740305.12.700e-3434.29PREDICTED: rab-like protein 6-like isoform X1 [Sac... [more]
OQS07028.17.800e-3429.47GTP-binding protein Parf [Thraustotheca clavata][more]
XP_009836974.11.000e-3332.84hypothetical protein H257_11675 [Aphanomyces astac... [more]
XP_015778818.18.600e-3334.56PREDICTED: rab-like protein 6 isoform X1 [Acropora... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL140nonsL140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR025ngnoR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002374NSK002374Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01980.1NO14G01980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|528581gene_5770Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100055g4gene5844Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01980.1NO14G01980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01980 ID=NO14G01980|Name=NO14G01980|organism=Nannochloropsis oceanica|type=gene|length=2333bp
ATGGGTAACGAAGTGAGCTTCGCTGGAACTTCTTCTACAAGTGCTGCAAC
CGAGGATGAAAGGAGAAAGGCAATCCGACGGATGGATGGGGACCTCCAAA
AAAAGCTAGGCAAAGGCATTGCCCACAATCTAAAGCTTGTGTTGAAAGGG
GAGCGGGGGAGCGGTAAAAGTGCCTTGCTGAGCCGGCTCAAAGGCCAATC
TTTCACATCGTCGTACGAGCCGACGCCCGAGATTCAGACAGCCACCATCA
GCTGGAGTGCCAAGGAAGAAGGCGAGATTGTCAAAGTGGAAGTATGGGAC
GTGGTGGACAAGGGCTTAGGTCGACGTGGTAGCAGTGATGGGGACAAGAC
GGGAAGCTGCGGTGGTGGCGGAGTAGCGCCGGACGCACTCGCAGGCATTC
CTCTAGACCTCCCCGCTCAAATACACCGCGCTAGTGGCTCGGGCAGTCAT
TCTTTTGGCGTCCTCGATGCCACGATCTTGGATGTGTGGAAAGGCGCGCA
TGGCGGCCTCTTTCTCATCAATCCATTCTCGGCCACGGCCTTGAGCTATA
TACAAAAGCAGCTTGCCGAGGTGCCCTCCCATATCCCTGTTCTTCTTCTT
CTCAACTTTCGAGACTTGCAACCTGCCGGTGAGGACAAGCAAGATATCGC
AGAAGCCCAAGAAAGGGTACGACGATCTACGAATCTACACCGGCCCGTAC
ACGTGCATCTGGAGACACTGCAGGCAATGGCCCGGGAGGAACGAGCGAAG
AGACGGATCTGCCATTCTTTTGCCTGCTCGATGCAAAACTGCTTCGGGCT
GACGATCCTCCACGCTTACATCAATCTCCCTTTTATCGTCATGAAAGAAG
AGGGGCTCCGTCGACAGATGGAACAGACGAGACGGGAGCTGGGCGAGGCG
ACGCGAGAGGTGGAAGATGCCATGACGCGTGAATCCTGGGGGGCATATAT
AGCCACTTTTGGGAAGAAGGAAAAGGAGGGCGGAGTTGGGCAGGGGAAGA
GGCAGCAGCAGCACTACCACCACCATCAGCATGATAAAGAAGAAAGACAA
GCAAAGCTGCAGGTTGCCAAGGCGCCAATAAAGGCGCCGATGCTCATCAC
ACGCTCCATTGGCGGTGGTGGCGTGGAAGAGCACAAGACTTCCCCTTTCT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCC
CCCTCCTCCTCCTCCTTTTCAGCCATCACCACCACCGACAACAATACCAC
GTCCTTTCCCAGGACAGCCAAGCATCAAAATATACTTCGAGGAGGTCCCG
CATCGACGTCTGCACGGCCACAGCAGCGGCAGCAGCAGCAGCCGCCAATA
CCACTGGCGGACGTGGACGACTTCAAATTTCAACCTAACGAGCAGAGTGA
GCTTGACCTCTTTCTAGCCGACGGGGAGGGAACCGAGGAAGAGGGTGCAC
TAGACGAGGAGCAAAAAGAGGCGGAGGGACGACGGTTGAGCTTGACGTCT
TGCTTGAAGCCGGGTTCGCTTGGGTCGCTCAGCAAAGCGGAGCGCCGCGC
AGCTGGCATAGCGGTGGGCAATGGTGCAGGATATGGGAGCGACGGTGAGG
ACGAGGAGGAGGAAGTCGAAGGGCAGGATGCGGTCGTGGCTGAAATCGGG
GAACAACGCTATGTAGGCCTAAGGCCTGTGACACTCTCATCCCAATCTTT
GTCTCCTTCGACCAGCGTCCCAGAGCAAGTCAATATGTTGTCCAGTGCTA
CAGGGAGAAGGGGGAAGAAGGACGAGGAGAATGCAGAGAAGGAGCCTAAA
GAAGACGATGAGTTTGATGTGCCGGCAGGCCTTCCAAATAATTCTTTTGT
GGGCGATCTGTCTTGGGACGAGGAGGAGGAGGAATGCGGCATAGGTGTCA
TGGGCATGGGTTGTAGTACCAACAGGAGCAGCAAGACACCCTTGAATTCT
TCCGCCACTGCTGGAACTGATGCTTCATTGACTTCTGCAACCACCTCCAA
GACCAACGTTGTGTTGAGTGAGGCGGCACGGGCTGCCATCGCTGCAACCA
TGCAAGAATTGGGAGAGGTAGTGCGGCCAGGAGGTGAAGAGGTCGGGGAG
GCAATCGAGGGGGGGGAGCGGCGAAAACACCGGCATCAAGACAAAAGCAA
GTCAGAAGGCTCGTCATCGTCACATCGTAAGCACAAAAAGAAAAGCAGTG
GCGGCCGGCTGGCAGATAAGTTGTAGGGAAAAGCGGGAGCCATCAAAAAC
CAGACATTCGATGGAATCTGAAAAGTGCAAGAAAGCAAGGACAAGCAAAT
GGCGTAAATACCTCGAATGAACGCACAAGTGAG
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protein sequence of NO14G01980.1

>NO14G01980.1-protein ID=NO14G01980.1-protein|Name=NO14G01980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=742bp
MGNEVSFAGTSSTSAATEDERRKAIRRMDGDLQKKLGKGIAHNLKLVLKG
ERGSGKSALLSRLKGQSFTSSYEPTPEIQTATISWSAKEEGEIVKVEVWD
VVDKGLGRRGSSDGDKTGSCGGGGVAPDALAGIPLDLPAQIHRASGSGSH
SFGVLDATILDVWKGAHGGLFLINPFSATALSYIQKQLAEVPSHIPVLLL
LNFRDLQPAGEDKQDIAEAQERVRRSTNLHRPVHVHLETLQAMAREERAK
RRICHSFACSMQNCFGLTILHAYINLPFIVMKEEGLRRQMEQTRRELGEA
TREVEDAMTRESWGAYIATFGKKEKEGGVGQGKRQQQHYHHHQHDKEERQ
AKLQVAKAPIKAPMLITRSIGGGGVEEHKTSPFSSSSSSSSSSSSSSSSS
PSSSSFSAITTTDNNTTSFPRTAKHQNILRGGPASTSARPQQRQQQQPPI
PLADVDDFKFQPNEQSELDLFLADGEGTEEEGALDEEQKEAEGRRLSLTS
CLKPGSLGSLSKAERRAAGIAVGNGAGYGSDGEDEEEEVEGQDAVVAEIG
EQRYVGLRPVTLSSQSLSPSTSVPEQVNMLSSATGRRGKKDEENAEKEPK
EDDEFDVPAGLPNNSFVGDLSWDEEEEECGIGVMGMGCSTNRSSKTPLNS
SATAGTDASLTSATTSKTNVVLSEAARAAIAATMQELGEVVRPGGEEVGE
AIEGGERRKHRHQDKSKSEGSSSSHRKHKKKSSGGRLADKL*
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Synonyms
Publications