NO14G01870, NO14G01870 (gene) Nannochloropsis oceanica

Overview
NameNO14G01870
Unique NameNO14G01870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1820
Alignment locationchr14:578684..580503 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:578684..580503 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL140nonsL140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR025ngnoR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002388NSK002388Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01870.1NO14G01870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01870.1NO14G01870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01870 ID=NO14G01870|Name=NO14G01870|organism=Nannochloropsis oceanica|type=gene|length=1820bp
AATAGGTCAAGTACAGAAATTTGAACCAATTATATGAACCGTCAAGTTGT
AGCAATGCTATCCTTATTTCGCAACCCTGCCAAGAAGGAAGCCCTACAGC
AGCCCCAGCCTCCCCGTGTCCACAACCCGCAGCGGGCCGCCGAGTCAAGC
AATCTGAACTTTCCATTGGCATCTCAGCCTTTGCATTCAGGGTCGATCCT
ATCTATCACACCGCGCTATTGGAGTTTTCCCCTTTGTTCTTTCCGCCCGG
AATCAATCCCCACATCCCAAGTCTCCAGCAACAAGTTGGCCTCACTTTTT
GGAAAAGGACGACAGCAGAAGGGAGTTGAAAAAGAAAAAGAAGGGGATGT
CGCAAAGCAGACGACTAGAGAACCCGTATCAGTCTATCTCCGTTTTGTCC
TTGTAGCAGATCATCGGGCCTTGGCCAAGGCCAGGTCTCAGACACAAGTA
TTGCTTTTAGGCGAAGACGGGGCCTCGTGTTTGTGGCCAGGGAAGCAAGC
CGTCAAACTGGCGATCCCCGAGACTGCAACGCGCTTTCTCTCTGAGAACT
TATCCTTAGTGATGGAGGTGTTTCAACAAGGGCTGGATGCTAAAAAGGAT
ACTATGTTTGCCCGGGGAGTTGTGCATCACTTCATGGAGCACCTTCAGAA
GGCAAAGTCGCCGCGAATCTTGGTGTTGCCAATGGTCTCAACGTCACCGC
TCATCGGGAACAGCAACAGGAGCACCACGAGCAAAAGGATGAGGAACAAC
GACGATCAAGAGATACGATTCGAAGCCTGCATTCGCTTAGCGTACTTGCC
TTTCGCACCGCTAGGCCACTGCCGGATTACAGACGTGAAGAGAGAAACGA
ATAAGAGGATATCGGACAAAGCTAAACACGGAGGGTTGGGCAAGAAAGTT
GTAAACGAGCAGATTGCCGAGAAGAAAGCGGAAGGCAAGAATGAAAGAGT
GGAAAAAGTGGATGACGATAAGACAGACGAGGGTAGCTTCCCACTCAAGA
CCTCACCAGGAACTGAAAGCGAGGGGTTGATTGGAGTACGGCAGCAGTGG
CAGCACGATGAACAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCATA
TGAGATACTAGCAAAGGAGGGCGCAAGCGTTTCGTCTACAAGCTTGAATC
CTCATCTGGACTTGGCGGCCAGCTTGATGGAACAAATCCGGCAAGAGCAA
ATGAGCGATGCCCCCCCTGTGCTGATGCCTGAGGAGGAGGTCGTCCGGAG
CTTGGAGCAGGAGGAGGAATACAATTTTGTGGAAGCACCTGCACGTGTGG
AGGTGGCGGCGCCAGGGTTCAGAACACCTTTGTTTGAGCTGGCACTGCAA
GCAAAGATGGTGGCACACAGTAAGGCGGCCACCTCAACCGAGCACGGACA
CGGAGGGCGAACTACAGCAGCAGCGGTTTTACGGGAAAAGCGACCCGGGG
AAAAATTACAAGTGCCTGTGGTAGAAGAACGGCGACGACGCATTCTCAAG
AGCGCGACTGCTTCTGCCCGTCGCAAGGCGCGGCTTGCGCGCATCAACAA
GTTGCTGGCGGACTTGGAGGCGTTGCCAACTACGCTAAAAAATGGGGACT
GTAGAAGGGGCCAAAGAGAGCGTATGCTGAATAACTGAGCAAAGAGAAGG
AAGAAAAGGTTGTGCATACACCTTTGCTATCATGCCTCCTTCACATTAGC
TTTTCATATTAAGATTTCAGGGCTTGTTGCAGTATTTAACACACACACGC
CAAAAGTAGAACCAAAGAACTAATGTGCGATGTCACCATGTGATCAACAG
CAATCACCGCATTCCCCCCG
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protein sequence of NO14G01870.1

>NO14G01870.1-protein ID=NO14G01870.1-protein|Name=NO14G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=535bp
MNRQVVAMLSLFRNPAKKEALQQPQPPRVHNPQRAAESSNLNFPLASQPL
HSGSILSITPRYWSFPLCSFRPESIPTSQVSSNKLASLFGKGRQQKGVEK
EKEGDVAKQTTREPVSVYLRFVLVADHRALAKARSQTQVLLLGEDGASCL
WPGKQAVKLAIPETATRFLSENLSLVMEVFQQGLDAKKDTMFARGVVHHF
MEHLQKAKSPRILVLPMVSTSPLIGNSNRSTTSKRMRNNDDQEIRFEACI
RLAYLPFAPLGHCRITDVKRETNKRISDKAKHGGLGKKVVNEQIAEKKAE
GKNERVEKVDDDKTDEGSFPLKTSPGTESEGLIGVRQQWQHDEQEEEEEE
EEEEAYEILAKEGASVSSTSLNPHLDLAASLMEQIRQEQMSDAPPVLMPE
EEVVRSLEQEEEYNFVEAPARVEVAAPGFRTPLFELALQAKMVAHSKAAT
STEHGHGGRTTAAAVLREKRPGEKLQVPVVEERRRRILKSATASARRKAR
LARINKLLADLEALPTTLKNGDCRRGQRERMLNN*
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Synonyms
Publications