NO14G01870.1, NO14G01870.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G01870.1
Unique NameNO14G01870.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1820
Alignment locationchr14:578684..580503 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:578684..580503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G01870.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Position :
0
Zoom :
x 1
20040060080010001200140016001800Sequence
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01870NO14G01870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G01870.1NO14G01870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G01870.1.cds1NO14G01870.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G01870.1 ID=NO14G01870.1|Name=NO14G01870.1|organism=Nannochloropsis oceanica|type=mRNA|length=1820bp
AATAGGTCAAGTACAGAAATTTGAACCAATTATATGAACCGTCAAGTTGT
AGCAATGCTATCCTTATTTCGCAACCCTGCCAAGAAGGAAGCCCTACAGC
AGCCCCAGCCTCCCCGTGTCCACAACCCGCAGCGGGCCGCCGAGTCAAGC
AATCTGAACTTTCCATTGGCATCTCAGCCTTTGCATTCAGGGTCGATCCT
ATCTATCACACCGCGCTATTGGAGTTTTCCCCTTTGTTCTTTCCGCCCGG
AATCAATCCCCACATCCCAAGTCTCCAGCAACAAGTTGGCCTCACTTTTT
GGAAAAGGACGACAGCAGAAGGGAGTTGAAAAAGAAAAAGAAGGGGATGT
CGCAAAGCAGACGACTAGAGAACCCGTATCAGTCTATCTCCGTTTTGTCC
TTGTAGCAGATCATCGGGCCTTGGCCAAGGCCAGGTCTCAGACACAAGTA
TTGCTTTTAGGCGAAGACGGGGCCTCGTGTTTGTGGCCAGGGAAGCAAGC
CGTCAAACTGGCGATCCCCGAGACTGCAACGCGCTTTCTCTCTGAGAACT
TATCCTTAGTGATGGAGGTGTTTCAACAAGGGCTGGATGCTAAAAAGGAT
ACTATGTTTGCCCGGGGAGTTGTGCATCACTTCATGGAGCACCTTCAGAA
GGCAAAGTCGCCGCGAATCTTGGTGTTGCCAATGGTCTCAACGTCACCGC
TCATCGGGAACAGCAACAGGAGCACCACGAGCAAAAGGATGAGGAACAAC
GACGATCAAGAGATACGATTCGAAGCCTGCATTCGCTTAGCGTACTTGCC
TTTCGCACCGCTAGGCCACTGCCGGATTACAGACGTGAAGAGAGAAACGA
ATAAGAGGATATCGGACAAAGCTAAACACGGAGGGTTGGGCAAGAAAGTT
GTAAACGAGCAGATTGCCGAGAAGAAAGCGGAAGGCAAGAATGAAAGAGT
GGAAAAAGTGGATGACGATAAGACAGACGAGGGTAGCTTCCCACTCAAGA
CCTCACCAGGAACTGAAAGCGAGGGGTTGATTGGAGTACGGCAGCAGTGG
CAGCACGATGAACAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCATA
TGAGATACTAGCAAAGGAGGGCGCAAGCGTTTCGTCTACAAGCTTGAATC
CTCATCTGGACTTGGCGGCCAGCTTGATGGAACAAATCCGGCAAGAGCAA
ATGAGCGATGCCCCCCCTGTGCTGATGCCTGAGGAGGAGGTCGTCCGGAG
CTTGGAGCAGGAGGAGGAATACAATTTTGTGGAAGCACCTGCACGTGTGG
AGGTGGCGGCGCCAGGGTTCAGAACACCTTTGTTTGAGCTGGCACTGCAA
GCAAAGATGGTGGCACACAGTAAGGCGGCCACCTCAACCGAGCACGGACA
CGGAGGGCGAACTACAGCAGCAGCGGTTTTACGGGAAAAGCGACCCGGGG
AAAAATTACAAGTGCCTGTGGTAGAAGAACGGCGACGACGCATTCTCAAG
AGCGCGACTGCTTCTGCCCGTCGCAAGGCGCGGCTTGCGCGCATCAACAA
GTTGCTGGCGGACTTGGAGGCGTTGCCAACTACGCTAAAAAATGGGGACT
GTAGAAGGGGCCAAAGAGAGCGTATGCTGAATAACTGAGCAAAGAGAAGG
AAGAAAAGGTTGTGCATACACCTTTGCTATCATGCCTCCTTCACATTAGC
TTTTCATATTAAGATTTCAGGGCTTGTTGCAGTATTTAACACACACACGC
CAAAAGTAGAACCAAAGAACTAATGTGCGATGTCACCATGTGATCAACAG
CAATCACCGCATTCCCCCCG
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protein sequence of NO14G01870.1

>NO14G01870.1-protein ID=NO14G01870.1-protein|Name=NO14G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=535bp
MNRQVVAMLSLFRNPAKKEALQQPQPPRVHNPQRAAESSNLNFPLASQPL
HSGSILSITPRYWSFPLCSFRPESIPTSQVSSNKLASLFGKGRQQKGVEK
EKEGDVAKQTTREPVSVYLRFVLVADHRALAKARSQTQVLLLGEDGASCL
WPGKQAVKLAIPETATRFLSENLSLVMEVFQQGLDAKKDTMFARGVVHHF
MEHLQKAKSPRILVLPMVSTSPLIGNSNRSTTSKRMRNNDDQEIRFEACI
RLAYLPFAPLGHCRITDVKRETNKRISDKAKHGGLGKKVVNEQIAEKKAE
GKNERVEKVDDDKTDEGSFPLKTSPGTESEGLIGVRQQWQHDEQEEEEEE
EEEEAYEILAKEGASVSSTSLNPHLDLAASLMEQIRQEQMSDAPPVLMPE
EEVVRSLEQEEEYNFVEAPARVEVAAPGFRTPLFELALQAKMVAHSKAAT
STEHGHGGRTTAAAVLREKRPGEKLQVPVVEERRRRILKSATASARRKAR
LARINKLLADLEALPTTLKNGDCRRGQRERMLNN*
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mRNA from alignment at chr14:578684..580503-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G01870.1 ID=NO14G01870.1|Name=NO14G01870.1|organism=Nannochloropsis oceanica|type=mRNA|length=1820bp|location=Sequence derived from alignment at chr14:578684..580503- (Nannochloropsis oceanica)
AATAGGTCAAGTACAGAAATTTGAACCAATTATATGAACCGTCAAGTTGT
AGCAATGCTATCCTTATTTCGCAACCCTGCCAAGAAGGAAGCCCTACAGC
AGCCCCAGCCTCCCCGTGTCCACAACCCGCAGCGGGCCGCCGAGTCAAGC
AATCTGAACTTTCCATTGGCATCTCAGCCTTTGCATTCAGGGTCGATCCT
ATCTATCACACCGCGCTATTGGAGTTTTCCCCTTTGTTCTTTCCGCCCGG
AATCAATCCCCACATCCCAAGTCTCCAGCAACAAGTTGGCCTCACTTTTT
GGAAAAGGACGACAGCAGAAGGGAGTTGAAAAAGAAAAAGAAGGGGATGT
CGCAAAGCAGACGACTAGAGAACCCGTATCAGTCTATCTCCGTTTTGTCC
TTGTAGCAGATCATCGGGCCTTGGCCAAGGCCAGGTCTCAGACACAAGTA
TTGCTTTTAGGCGAAGACGGGGCCTCGTGTTTGTGGCCAGGGAAGCAAGC
CGTCAAACTGGCGATCCCCGAGACTGCAACGCGCTTTCTCTCTGAGAACT
TATCCTTAGTGATGGAGGTGTTTCAACAAGGGCTGGATGCTAAAAAGGAT
ACTATGTTTGCCCGGGGAGTTGTGCATCACTTCATGGAGCACCTTCAGAA
GGCAAAGTCGCCGCGAATCTTGGTGTTGCCAATGGTCTCAACGTCACCGC
TCATCGGGAACAGCAACAGGAGCACCACGAGCAAAAGGATGAGGAACAAC
GACGATCAAGAGATACGATTCGAAGCCTGCATTCGCTTAGCGTACTTGCC
TTTCGCACCGCTAGGCCACTGCCGGATTACAGACGTGAAGAGAGAAACGA
ATAAGAGGATATCGGACAAAGCTAAACACGGAGGGTTGGGCAAGAAAGTT
GTAAACGAGCAGATTGCCGAGAAGAAAGCGGAAGGCAAGAATGAAAGAGT
GGAAAAAGTGGATGACGATAAGACAGACGAGGGTAGCTTCCCACTCAAGA
CCTCACCAGGAACTGAAAGCGAGGGGTTGATTGGAGTACGGCAGCAGTGG
CAGCACGATGAACAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCATA
TGAGATACTAGCAAAGGAGGGCGCAAGCGTTTCGTCTACAAGCTTGAATC
CTCATCTGGACTTGGCGGCCAGCTTGATGGAACAAATCCGGCAAGAGCAA
ATGAGCGATGCCCCCCCTGTGCTGATGCCTGAGGAGGAGGTCGTCCGGAG
CTTGGAGCAGGAGGAGGAATACAATTTTGTGGAAGCACCTGCACGTGTGG
AGGTGGCGGCGCCAGGGTTCAGAACACCTTTGTTTGAGCTGGCACTGCAA
GCAAAGATGGTGGCACACAGTAAGGCGGCCACCTCAACCGAGCACGGACA
CGGAGGGCGAACTACAGCAGCAGCGGTTTTACGGGAAAAGCGACCCGGGG
AAAAATTACAAGTGCCTGTGGTAGAAGAACGGCGACGACGCATTCTCAAG
AGCGCGACTGCTTCTGCCCGTCGCAAGGCGCGGCTTGCGCGCATCAACAA
GTTGCTGGCGGACTTGGAGGCGTTGCCAACTACGCTAAAAAATGGGGACT
GTAGAAGGGGCCAAAGAGAGCGTATGCTGAATAACTGAGCAAAGAGAAGG
AAGAAAAGGTTGTGCATACACCTTTGCTATCATGCCTCCTTCACATTAGC
TTTTCATATTAAGATTTCAGGGCTTGTTGCAGTATTTAACACACACACGC
CAAAAGTAGAACCAAAGAACTAATGTGCGATGTCACCATGTGATCAACAG
CAATCACCGCATTCCCCCCG
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Coding sequence (CDS) from alignment at chr14:578684..580503-

>NO14G01870.1 ID=NO14G01870.1|Name=NO14G01870.1|organism=Nannochloropsis oceanica|type=CDS|length=1605bp|location=Sequence derived from alignment at chr14:578684..580503- (Nannochloropsis oceanica)
ATGAACCGTCAAGTTGTAGCAATGCTATCCTTATTTCGCAACCCTGCCAA
GAAGGAAGCCCTACAGCAGCCCCAGCCTCCCCGTGTCCACAACCCGCAGC
GGGCCGCCGAGTCAAGCAATCTGAACTTTCCATTGGCATCTCAGCCTTTG
CATTCAGGGTCGATCCTATCTATCACACCGCGCTATTGGAGTTTTCCCCT
TTGTTCTTTCCGCCCGGAATCAATCCCCACATCCCAAGTCTCCAGCAACA
AGTTGGCCTCACTTTTTGGAAAAGGACGACAGCAGAAGGGAGTTGAAAAA
GAAAAAGAAGGGGATGTCGCAAAGCAGACGACTAGAGAACCCGTATCAGT
CTATCTCCGTTTTGTCCTTGTAGCAGATCATCGGGCCTTGGCCAAGGCCA
GGTCTCAGACACAAGTATTGCTTTTAGGCGAAGACGGGGCCTCGTGTTTG
TGGCCAGGGAAGCAAGCCGTCAAACTGGCGATCCCCGAGACTGCAACGCG
CTTTCTCTCTGAGAACTTATCCTTAGTGATGGAGGTGTTTCAACAAGGGC
TGGATGCTAAAAAGGATACTATGTTTGCCCGGGGAGTTGTGCATCACTTC
ATGGAGCACCTTCAGAAGGCAAAGTCGCCGCGAATCTTGGTGTTGCCAAT
GGTCTCAACGTCACCGCTCATCGGGAACAGCAACAGGAGCACCACGAGCA
AAAGGATGAGGAACAACGACGATCAAGAGATACGATTCGAAGCCTGCATT
CGCTTAGCGTACTTGCCTTTCGCACCGCTAGGCCACTGCCGGATTACAGA
CGTGAAGAGAGAAACGAATAAGAGGATATCGGACAAAGCTAAACACGGAG
GGTTGGGCAAGAAAGTTGTAAACGAGCAGATTGCCGAGAAGAAAGCGGAA
GGCAAGAATGAAAGAGTGGAAAAAGTGGATGACGATAAGACAGACGAGGG
TAGCTTCCCACTCAAGACCTCACCAGGAACTGAAAGCGAGGGGTTGATTG
GAGTACGGCAGCAGTGGCAGCACGATGAACAAGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGCATATGAGATACTAGCAAAGGAGGGCGCAAGCGTTTC
GTCTACAAGCTTGAATCCTCATCTGGACTTGGCGGCCAGCTTGATGGAAC
AAATCCGGCAAGAGCAAATGAGCGATGCCCCCCCTGTGCTGATGCCTGAG
GAGGAGGTCGTCCGGAGCTTGGAGCAGGAGGAGGAATACAATTTTGTGGA
AGCACCTGCACGTGTGGAGGTGGCGGCGCCAGGGTTCAGAACACCTTTGT
TTGAGCTGGCACTGCAAGCAAAGATGGTGGCACACAGTAAGGCGGCCACC
TCAACCGAGCACGGACACGGAGGGCGAACTACAGCAGCAGCGGTTTTACG
GGAAAAGCGACCCGGGGAAAAATTACAAGTGCCTGTGGTAGAAGAACGGC
GACGACGCATTCTCAAGAGCGCGACTGCTTCTGCCCGTCGCAAGGCGCGG
CTTGCGCGCATCAACAAGTTGCTGGCGGACTTGGAGGCGTTGCCAACTAC
GCTAAAAAATGGGGACTGTAGAAGGGGCCAAAGAGAGCGTATGCTGAATA
ACTGA
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Synonyms
Publications