NO14G01460, NO14G01460 (gene) Nannochloropsis oceanica

Overview
NameNO14G01460
Unique NameNO14G01460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3121
Alignment locationchr14:460735..463855 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:460735..463855 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO14G01460 vs. NCBI_GenBank
Match: PNH01468.1 (hypothetical protein TSOC_012642, partial [Tetrabaena socialis])

HSP 1 Score: 84.0 bits (206), Expect = 1.900e-12
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0 
Query:  131 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDSLDDINTAFSRTTMKTCCPDLRSAHRELIVQHY---HRLWDARCEKKRARAHMAVYAGKQKVLDGFF----AGLTGPGQAKPIIAYGAGIFSHTGKEEMSVPVNRVLRVCKKHYRTVYVPEHLTTKV 300
            RIV IDPGR N++ A++  S   K+  LTR  YY++  +   K++ +SW   + D     S  + K    DL  A    +  H       W+   + + A+  + +Y GK++VL  FF     G  G      +IAYGA  F+  GK E+SVP + V + C++ + T  V E  TTK+
Sbjct:  663 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKI 837
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BLAST of NO14G01460 vs. NCBI_GenBank
Match: PNH08370.1 (hypothetical protein TSOC_005131 [Tetrabaena socialis])

HSP 1 Score: 84.0 bits (206), Expect = 1.900e-12
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0 
Query:  131 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDSLDDINTAFSRTTMKTCCPDLRSAHRELIVQHY---HRLWDARCEKKRARAHMAVYAGKQKVLDGFF----AGLTGPGQAKPIIAYGAGIFSHTGKEEMSVPVNRVLRVCKKHYRTVYVPEHLTTKV 300
            RIV IDPGR N++ A++  S   K+  LTR  YY++  +   K++ +SW   + D     S  + K    DL  A    +  H       W+   + + A+  + +Y GK++VL  FF     G  G      +IAYGA  F+  GK E+SVP + V + C++ + T  V E  TTK+
Sbjct:  377 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKI 551
[Close]
BLAST of NO14G01460 vs. NCBI_GenBank
Match: PNH08357.1 (hypothetical protein TSOC_005129 [Tetrabaena socialis])

HSP 1 Score: 84.0 bits (206), Expect = 1.900e-12
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0 
Query:  131 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDSLDDINTAFSRTTMKTCCPDLRSAHRELIVQHY---HRLWDARCEKKRARAHMAVYAGKQKVLDGFF----AGLTGPGQAKPIIAYGAGIFSHTGKEEMSVPVNRVLRVCKKHYRTVYVPEHLTTKV 300
            RIV IDPGR N++ A++  S   K+  LTR  YY++  +   K++ +SW   + D     S  + K    DL  A    +  H       W+   + + A+  + +Y GK++VL  FF     G  G      +IAYGA  F+  GK E+SVP + V + C++ + T  V E  TTK+
Sbjct:  324 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKI 498
[Close]
BLAST of NO14G01460 vs. NCBI_GenBank
Match: PNH08379.1 (hypothetical protein TSOC_005114 [Tetrabaena socialis])

HSP 1 Score: 84.0 bits (206), Expect = 1.900e-12
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0 
Query:  131 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDSLDDINTAFSRTTMKTCCPDLRSAHRELIVQHY---HRLWDARCEKKRARAHMAVYAGKQKVLDGFF----AGLTGPGQAKPIIAYGAGIFSHTGKEEMSVPVNRVLRVCKKHYRTVYVPEHLTTKV 300
            RIV IDPGR N++ A++  S   K+  LTR  YY++  +   K++ +SW   + D     S  + K    DL  A    +  H       W+   + + A+  + +Y GK++VL  FF     G  G      +IAYGA  F+  GK E+SVP + V + C++ + T  V E  TTK+
Sbjct:   93 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKI 267
[Close]
BLAST of NO14G01460 vs. NCBI_GenBank
Match: PNH02916.1 (hypothetical protein TSOC_011071 [Tetrabaena socialis])

HSP 1 Score: 80.1 bits (196), Expect = 2.800e-11
Identity = 63/189 (33.33%), Postives = 96/189 (50.79%), Query Frame = 0 
Query:  124 LQPVRER----RIVAIDPGRVNLVTALDSQTG--KIKTLTRRAYYEKGRINECKRKFSSWEDSLDDINTAFSRTTMKTCCPDLRSAHRELIVQHYH---RLWDARCEKKRARAHMAVYAGKQKVLDGFFAGLT--GPG-QAKP-IIAYGAGIFSHTGKEEMSVPVNRVLRVCKKHYRTVYVPEHLTTKV 300
            L+P  E+    RIV IDPGR N++ A++      KI  LTR  YY++  +   K++ ++W     +  T  S  + K    DL+ A    +  H       W+   + + A+ H+ +Y GK++VL  FF  +    PG  A+P II YGA  F+  GK E+SVP   V + C+  + T  V E  +TKV
Sbjct:  356 LRPTPEQLSRCRIVVIDPGRTNIIYAVEVTPDGVKIYRLTRAQYYQESGVERGKQQAANWLRGTKEELTKLSAASPKGA--DLQ-AFLVFVTTHLETSDARWEEALKPRWAQMHLRLYGGKKRVLAKFFDEIARGDPGAPARPVIIGYGAAKFAPGGKGELSVPTCGVFKACRARFPTHLVDEFRSTKV 541
[Close]
BLAST of NO14G01460 vs. NCBI_GenBank
Match: PNH00238.1 (hypothetical protein TSOC_013956 [Tetrabaena socialis])

HSP 1 Score: 78.6 bits (192), Expect = 8.100e-11
Identity = 51/176 (28.98%), Postives = 85/176 (48.30%), Query Frame = 0 
Query:  131 RIVAIDPGRVNLVTALD---SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDSLDDINTAFSRTTMKTCCPDLRSAHRELIVQHYHRLWDARCEKKRARAHMAVYAGKQKVLDGFFA----GLTGPGQAKPIIAYGAGIFSHTGKEEMSVPVNRVLRVCKKHYRTVYVPEHLTTKV 300
            R+V IDPGR N+V A++       KI  LTR  YY++  + +  ++ + W   + +     S  + K     L  A     ++     W    + + A+  + +Y GK++V+  FF+    G  G      +I YGA  F+  GK E+SVP + V + C++ + T  V E  TTK+
Sbjct:  352 RVVVIDPGRTNIVYAVEVPPEAPPKIYRLTRSQYYQESGVVQGSQRAARWLRGVKEELAQLSTASPKGASLPLFQAFIATYLETCEVRWTEALKTRWAQQSLRLYGGKKRVVAKFFSEIARGDAGAPARPVVIGYGAAKFAPGGKGELSVPTSGVFKACRERFPTYLVDEFRTTKI 527
The following BLAST results are available for this feature:
BLAST of NO14G01460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 6
Match NameE-valueIdentityDescription
PNH01468.11.900e-1232.58hypothetical protein TSOC_012642, partial [Tetraba... [more]
PNH08370.11.900e-1232.58hypothetical protein TSOC_005131 [Tetrabaena socia... [more]
PNH08357.11.900e-1232.58hypothetical protein TSOC_005129 [Tetrabaena socia... [more]
PNH08379.11.900e-1232.58hypothetical protein TSOC_005114 [Tetrabaena socia... [more]
PNH02916.12.800e-1133.33hypothetical protein TSOC_011071 [Tetrabaena socia... [more]
PNH00238.18.100e-1128.98hypothetical protein TSOC_013956 [Tetrabaena socia... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01460.1NO14G01460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01460.1NO14G01460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01460 ID=NO14G01460|Name=NO14G01460|organism=Nannochloropsis oceanica|type=gene|length=3121bp
ATGACGCTCAGTACCAGAGCTCTCAGTGATCTGCTGAAGAACGTGGTGCG
ACGCAGACCCACAGCGATGACCAAGGAGGCATGGAGCGAATCATGCCCCG
ATTGGTTGAGGCGACTGGGAGGGATGGGCCCTAAAAGGTTTTGCCGGGAT
GCGGTTTCGGTGAAGGAGATGTGGGACGAGACTTTCCGGGTGGGGGGCCT
ACGAAACCAGCGGGTGTTTCACAATCGGGTTTCCACGGATGGTGTCTTGG
TGTCGGTCTTCTTCCACGTGGCGAAGGAGAGACTGGAGAGGGAGAAAGCG
GAGAGGGTCAGAGTGGAGAAGGAGGACGAAGAGAAGGAGATGCTGGAACG
TCAGCAGGGGCAGGAAAACCTGCAGCCAGTCAGAGAGCGACGCATTGTCG
CGATCGATCCCGGTCGCGTCAACCTGGTCACGGCGTTGGACTCGCAGACG
GGCAAGATCAAGACCTTGACGCGTCGTGCGTACTACGAAAAGGGGCGGAT
CAACGAGTGCAAGAGAAAGTTTAGCTCTTGGGAGGACTCACTCGATGACA
TCAATACCGCCTTTTCGAGGACCACGATGAAGACCTGCTGTCCCGACTTG
CGTAGCGCTCACAGGGAGCTGATCGTACAGCATTACCACCGATTGTGGGA
TGCCAGGTGCGAAAAGAAACGGGCGCGTGCGCATATGGCGGTGTATGCGG
GAAAGCAGAAGGTTTTGGATGGCTTTTTTGCGGGCTTGACGGGGCCAGGG
CAGGCGAAGCCTATTATCGCGTATGGAGCGGGGATTTTCTCGCACACAGG
CAAGGAAGAGATGAGCGTTCCGGTCAATAGGGTGCTCCGGGTGTGCAAAA
AGCACTACAGAACAGTGTATGTACCCGAGCACCTGACGACAAAGGTACAA
CTCGATTGTGGGCAGCGTCTAACCCCAATTGCAAGAAGGGCAGGAGGAGA
AGGAGGATCAGTTGCAGGAGGAGGAGGAAGGGAAGAAGAAGGAGGAGGAG
GAGGAGGAGGAGGACGAGAAGGAGGGGGAGGAGGCGGCGGAAGACGAGAA
GAAGAAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAAG
AGGCCAAGGCAAGAAAGCTGGGGGAGGAACGGAAGTGGGAGGGAGGGAAT
ATGCGGGAGCCAGTGCAACATCAGCACCAGCACCAACACCGGCAGTGGGA
GGAGGGAAGGGAGGAGGGGGAGGAAGAAGAGGGAAAAGAACCCGGGCTGC
GGAAGCGGCAGCAGCCGCCGGCACGCAGCTGACCATACGGGTGGCAGTCG
CAGAAGCACGAGCCCAGGCAGCTGCAGGAGGAGGAGGAGGGGGAAGGGAT
AGCAGGATGGATACAGGAGGGGATCCTGGAAGGGTAGGAGTGGGGGGAGT
CGGGGCGGACGAAGCAgtaagagtaggaggaggagagggaacgagaggaa
tccctactttgctctctttacccggagaaaaggcaacacgagcacttgca
accattgctagaattcgtgcagcacttgcaagggaaagggagaagggaga
agggaaagagaaacatagtagGAGCGCTTCGACGAGGTGGAAGAGGGGGA
GGGGAAGGAGGAGAAGGAGGGGGAGGATGAGGGGGAGGAGGGGGAGGAAG
AGGAGGAAGAGGAGGAAGAGGAGGGGGAGGAGGGGGAGGAGGGGGAGGAG
GGGAAGGAGGGGAAGGAGGAGGTGGACGAGGAGGAAGTGGACGAGAAGGA
GGTGGACGAGGAGGGAGACGAGGAGAAGAAGAGAAAGAAGAAGAAGAGGA
AGAAGAAGAGGATGAAGAGGAAAAAGAAGACGAACAAGAAGACGAACAAG
AAGAAGGAGAGGAAGAAGAAGAAGAGGAAGAGGGAGAAGATGAAGAGGAA
GGAGATGAAGAGGAAGAGGAAGAAGAAAAAGAAGAAGGAGGAGGAGGAGG
AGGAGGAGGAGGGGGAGGAGGAGGGCGACGAGAAGGGGGTGGAAGGGGAA
GGGGAGGAGGAGGAGGAGGAGGCGGTGGAAGCAGAGGGGAAGGAGAAGCA
GCAGGAGGAGGAGGAGGAGGAGAAGGGGGAGGAGGAGAAGGGAAATAAAT
TTTAATTCGAAGTCAAGTTTTCTCGCCGTTACATGATGTATATTTAGGAA
ATCAACCCAACTAAACCGCAGGCGTGCACCGACCTGGCACGCAAGACAAA
CTACGAAGTGAGAAATACGCTCAAGAAGGGCGCGAAAAGGACGAGGTGGG
GCTGCACGACTCCAAGCACAACGTCTCAAACGAGCTGCGCTGTTAGAAGA
CATGCAGCAACAAAAGCTGCAGAAGGAAGCCTTTGAGCAGACGTATCGCG
ACGCCACTTAACGACAGCTCGAGGTGTGGACAGAGGAGCCCGGCACCAAC
AGGCGCAAGACGAAAAGAAGCGCCAATTAAATATGGAAATTAAGACGTAT
CTGAAACAGCAGCGACAAGAGACCCAAGCCACATGACAGGCCCTTCTGGA
CGTGCGACCACAGTCGACGCATTCTCTGGTGGATGATACTCAGATGTATT
TTCAAGCTTGCATACACCAGGAGATGACGAAAAAGCCTACCCTCGGCAAG
TCCTTTGTTTCACCTGCATCAAGTTCACGAGGCTCGTGAAGCCGTTCATA
CTGCCTGCGATCCTCAATCCTCATACATGCCGTTGTCCGGGCACGGGTTT
GGAGACGACGGGGAATTCATATCCTGCAGCGAGTAAACGGACTGGAGATG
CAACAGGAAGCAAGGCGGTACGGATAGCGAAACCGACCCGCAATAGCACT
AATAAGTCCGCAAAAAAGAAATAACTTCCTGATGATATTGATTTATGTAT
TGTGCTTTTGAATTCAAATGGAGTGGGATGCTCCACACATACAGTATAGG
CCTGCGTTAAGCGCGCGCGGTGAAAAGCCCTTCTGGAAAATGCATTTAAA
AAAAAAAACAGCCAAGGCGAAGGCACCAACACCAAAACTGCGACTATCAC
ATACAACCTATGGTTGGACGGCGCGTAGAATCTCTAAGCGAAGAGGGTAT
AATGAGAAAGACGCCTTCGTGCGGGATGACCGGCAGCCAAAGGAGCGGTT
TGTTTAGAGCGGGATGGCGTC
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protein sequence of NO14G01460.1

>NO14G01460.1-protein ID=NO14G01460.1-protein|Name=NO14G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=650bp
MTLSTRALSDLLKNVVRRRPTAMTKEAWSESCPDWLRRLGGMGPKRFCRD
AVSVKEMWDETFRVGGLRNQRVFHNRVSTDGVLVSVFFHVAKERLEREKA
ERVRVEKEDEEKEMLERQQGQENLQPVRERRIVAIDPGRVNLVTALDSQT
GKIKTLTRRAYYEKGRINECKRKFSSWEDSLDDINTAFSRTTMKTCCPDL
RSAHRELIVQHYHRLWDARCEKKRARAHMAVYAGKQKVLDGFFAGLTGPG
QAKPIIAYGAGIFSHTGKEEMSVPVNRVLRVCKKHYRTVYVPEHLTTKVQ
LDCGQRLTPIARRAGGEGGSVAGGGGREEEGGGGGGGGREGGGGGGGRRE
EEGGGGGGGGGGGGGGRGQGKKAGGGTEVGGREYAGASATSAPAPTPAVG
GGKGGGGGRRGKRTRAAEAAAAAGTQLTIRVAVAEARAQAAAGGGGGGRD
SRMDTGGDPGRVGVGGVGADEAERFDEVEEGEGKEEKEGEDEGEEGEEEE
EEEEEEGEEGEEGEEGKEGKEEVDEEEVDEKEVDEEGDEEKKRKKKKRKK
KRMKRKKKTNKKTNKKKERKKKKRKREKMKRKEMKRKRKKKKKKEEEEEE
EEGEEEGDEKGVEGEGEEEEEEAVEAEGKEKQQEEEEEEKGEEEKGNKF*
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Synonyms
Publications