NO14G01460.1, NO14G01460.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G01460.1
Unique NameNO14G01460.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2966
Alignment locationchr14:460735..463855 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:460735..463855 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G01460.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01460NO14G01460Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G01460.1NO14G01460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G01460.1.cds1NO14G01460.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G01460.1.cds2NO14G01460.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G01460.1 ID=NO14G01460.1|Name=NO14G01460.1|organism=Nannochloropsis oceanica|type=mRNA|length=2966bp
ATGACGCTCAGTACCAGAGCTCTCAGTGATCTGCTGAAGAACGTGGTGCG
ACGCAGACCCACAGCGATGACCAAGGAGGCATGGAGCGAATCATGCCCCG
ATTGGTTGAGGCGACTGGGAGGGATGGGCCCTAAAAGGTTTTGCCGGGAT
GCGGTTTCGGTGAAGGAGATGTGGGACGAGACTTTCCGGGTGGGGGGCCT
ACGAAACCAGCGGGTGTTTCACAATCGGGTTTCCACGGATGGTGTCTTGG
TGTCGGTCTTCTTCCACGTGGCGAAGGAGAGACTGGAGAGGGAGAAAGCG
GAGAGGGTCAGAGTGGAGAAGGAGGACGAAGAGAAGGAGATGCTGGAACG
TCAGCAGGGGCAGGAAAACCTGCAGCCAGTCAGAGAGCGACGCATTGTCG
CGATCGATCCCGGTCGCGTCAACCTGGTCACGGCGTTGGACTCGCAGACG
GGCAAGATCAAGACCTTGACGCGTCGTGCGTACTACGAAAAGGGGCGGAT
CAACGAGTGCAAGAGAAAGTTTAGCTCTTGGGAGGACTCACTCGATGACA
TCAATACCGCCTTTTCGAGGACCACGATGAAGACCTGCTGTCCCGACTTG
CGTAGCGCTCACAGGGAGCTGATCGTACAGCATTACCACCGATTGTGGGA
TGCCAGGTGCGAAAAGAAACGGGCGCGTGCGCATATGGCGGTGTATGCGG
GAAAGCAGAAGGTTTTGGATGGCTTTTTTGCGGGCTTGACGGGGCCAGGG
CAGGCGAAGCCTATTATCGCGTATGGAGCGGGGATTTTCTCGCACACAGG
CAAGGAAGAGATGAGCGTTCCGGTCAATAGGGTGCTCCGGGTGTGCAAAA
AGCACTACAGAACAGTGTATGTACCCGAGCACCTGACGACAAAGGTACAA
CTCGATTGTGGGCAGCGTCTAACCCCAATTGCAAGAAGGGCAGGAGGAGA
AGGAGGATCAGTTGCAGGAGGAGGAGGAAGGGAAGAAGAAGGAGGAGGAG
GAGGAGGAGGAGGACGAGAAGGAGGGGGAGGAGGCGGCGGAAGACGAGAA
GAAGAAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAAG
AGGCCAAGGCAAGAAAGCTGGGGGAGGAACGGAAGTGGGAGGGAGGGAAT
ATGCGGGAGCCAGTGCAACATCAGCACCAGCACCAACACCGGCAGTGGGA
GGAGGGAAGGGAGGAGGGGGAGGAAGAAGAGGGAAAAGAACCCGGGCTGC
GGAAGCGGCAGCAGCCGCCGGCACGCAGCTGACCATACGGGTGGCAGTCG
CAGAAGCACGAGCCCAGGCAGCTGCAGGAGGAGGAGGAGGGGGAAGGGAT
AGCAGGATGGATACAGGAGGGGATCCTGGAAGGGTAGGAGTGGGGGGAGT
CGGGGCGGACGAAGCAGAGCGCTTCGACGAGGTGGAAGAGGGGGAGGGGA
AGGAGGAGAAGGAGGGGGAGGATGAGGGGGAGGAGGGGGAGGAAGAGGAG
GAAGAGGAGGAAGAGGAGGGGGAGGAGGGGGAGGAGGGGGAGGAGGGGAA
GGAGGGGAAGGAGGAGGTGGACGAGGAGGAAGTGGACGAGAAGGAGGTGG
ACGAGGAGGGAGACGAGGAGAAGAAGAGAAAGAAGAAGAAGAGGAAGAAG
AAGAGGATGAAGAGGAAAAAGAAGACGAACAAGAAGACGAACAAGAAGAA
GGAGAGGAAGAAGAAGAAGAGGAAGAGGGAGAAGATGAAGAGGAAGGAGA
TGAAGAGGAAGAGGAAGAAGAAAAAGAAGAAGGAGGAGGAGGAGGAGGAG
GAGGAGGGGGAGGAGGAGGGCGACGAGAAGGGGGTGGAAGGGGAAGGGGA
GGAGGAGGAGGAGGAGGCGGTGGAAGCAGAGGGGAAGGAGAAGCAGCAGG
AGGAGGAGGAGGAGGAGAAGGGGGAGGAGGAGAAGGGAAATAAATTTTAA
TTCGAAGTCAAGTTTTCTCGCCGTTACATGATGTATATTTAGGAAATCAA
CCCAACTAAACCGCAGGCGTGCACCGACCTGGCACGCAAGACAAACTACG
AAGTGAGAAATACGCTCAAGAAGGGCGCGAAAAGGACGAGGTGGGGCTGC
ACGACTCCAAGCACAACGTCTCAAACGAGCTGCGCTGTTAGAAGACATGC
AGCAACAAAAGCTGCAGAAGGAAGCCTTTGAGCAGACGTATCGCGACGCC
ACTTAACGACAGCTCGAGGTGTGGACAGAGGAGCCCGGCACCAACAGGCG
CAAGACGAAAAGAAGCGCCAATTAAATATGGAAATTAAGACGTATCTGAA
ACAGCAGCGACAAGAGACCCAAGCCACATGACAGGCCCTTCTGGACGTGC
GACCACAGTCGACGCATTCTCTGGTGGATGATACTCAGATGTATTTTCAA
GCTTGCATACACCAGGAGATGACGAAAAAGCCTACCCTCGGCAAGTCCTT
TGTTTCACCTGCATCAAGTTCACGAGGCTCGTGAAGCCGTTCATACTGCC
TGCGATCCTCAATCCTCATACATGCCGTTGTCCGGGCACGGGTTTGGAGA
CGACGGGGAATTCATATCCTGCAGCGAGTAAACGGACTGGAGATGCAACA
GGAAGCAAGGCGGTACGGATAGCGAAACCGACCCGCAATAGCACTAATAA
GTCCGCAAAAAAGAAATAACTTCCTGATGATATTGATTTATGTATTGTGC
TTTTGAATTCAAATGGAGTGGGATGCTCCACACATACAGTATAGGCCTGC
GTTAAGCGCGCGCGGTGAAAAGCCCTTCTGGAAAATGCATTTAAAAAAAA
AAACAGCCAAGGCGAAGGCACCAACACCAAAACTGCGACTATCACATACA
ACCTATGGTTGGACGGCGCGTAGAATCTCTAAGCGAAGAGGGTATAATGA
GAAAGACGCCTTCGTGCGGGATGACCGGCAGCCAAAGGAGCGGTTTGTTT
AGAGCGGGATGGCGTC
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protein sequence of NO14G01460.1

>NO14G01460.1-protein ID=NO14G01460.1-protein|Name=NO14G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=650bp
MTLSTRALSDLLKNVVRRRPTAMTKEAWSESCPDWLRRLGGMGPKRFCRD
AVSVKEMWDETFRVGGLRNQRVFHNRVSTDGVLVSVFFHVAKERLEREKA
ERVRVEKEDEEKEMLERQQGQENLQPVRERRIVAIDPGRVNLVTALDSQT
GKIKTLTRRAYYEKGRINECKRKFSSWEDSLDDINTAFSRTTMKTCCPDL
RSAHRELIVQHYHRLWDARCEKKRARAHMAVYAGKQKVLDGFFAGLTGPG
QAKPIIAYGAGIFSHTGKEEMSVPVNRVLRVCKKHYRTVYVPEHLTTKVQ
LDCGQRLTPIARRAGGEGGSVAGGGGREEEGGGGGGGGREGGGGGGGRRE
EEGGGGGGGGGGGGGGRGQGKKAGGGTEVGGREYAGASATSAPAPTPAVG
GGKGGGGGRRGKRTRAAEAAAAAGTQLTIRVAVAEARAQAAAGGGGGGRD
SRMDTGGDPGRVGVGGVGADEAERFDEVEEGEGKEEKEGEDEGEEGEEEE
EEEEEEGEEGEEGEEGKEGKEEVDEEEVDEKEVDEEGDEEKKRKKKKRKK
KRMKRKKKTNKKTNKKKERKKKKRKREKMKRKEMKRKRKKKKKKEEEEEE
EEGEEEGDEKGVEGEGEEEEEEAVEAEGKEKQQEEEEEEKGEEEKGNKF*
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mRNA from alignment at chr14:460735..463855+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G01460.1 ID=NO14G01460.1|Name=NO14G01460.1|organism=Nannochloropsis oceanica|type=mRNA|length=3121bp|location=Sequence derived from alignment at chr14:460735..463855+ (Nannochloropsis oceanica)
ATGACGCTCAGTACCAGAGCTCTCAGTGATCTGCTGAAGAACGTGGTGCG ACGCAGACCCACAGCGATGACCAAGGAGGCATGGAGCGAATCATGCCCCG ATTGGTTGAGGCGACTGGGAGGGATGGGCCCTAAAAGGTTTTGCCGGGAT GCGGTTTCGGTGAAGGAGATGTGGGACGAGACTTTCCGGGTGGGGGGCCT ACGAAACCAGCGGGTGTTTCACAATCGGGTTTCCACGGATGGTGTCTTGG TGTCGGTCTTCTTCCACGTGGCGAAGGAGAGACTGGAGAGGGAGAAAGCG GAGAGGGTCAGAGTGGAGAAGGAGGACGAAGAGAAGGAGATGCTGGAACG TCAGCAGGGGCAGGAAAACCTGCAGCCAGTCAGAGAGCGACGCATTGTCG CGATCGATCCCGGTCGCGTCAACCTGGTCACGGCGTTGGACTCGCAGACG GGCAAGATCAAGACCTTGACGCGTCGTGCGTACTACGAAAAGGGGCGGAT CAACGAGTGCAAGAGAAAGTTTAGCTCTTGGGAGGACTCACTCGATGACA TCAATACCGCCTTTTCGAGGACCACGATGAAGACCTGCTGTCCCGACTTG CGTAGCGCTCACAGGGAGCTGATCGTACAGCATTACCACCGATTGTGGGA TGCCAGGTGCGAAAAGAAACGGGCGCGTGCGCATATGGCGGTGTATGCGG GAAAGCAGAAGGTTTTGGATGGCTTTTTTGCGGGCTTGACGGGGCCAGGG CAGGCGAAGCCTATTATCGCGTATGGAGCGGGGATTTTCTCGCACACAGG CAAGGAAGAGATGAGCGTTCCGGTCAATAGGGTGCTCCGGGTGTGCAAAA AGCACTACAGAACAGTGTATGTACCCGAGCACCTGACGACAAAGGTACAA CTCGATTGTGGGCAGCGTCTAACCCCAATTGCAAGAAGGGCAGGAGGAGA AGGAGGATCAGTTGCAGGAGGAGGAGGAAGGGAAGAAGAAGGAGGAGGAG GAGGAGGAGGAGGACGAGAAGGAGGGGGAGGAGGCGGCGGAAGACGAGAA GAAGAAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAAG AGGCCAAGGCAAGAAAGCTGGGGGAGGAACGGAAGTGGGAGGGAGGGAAT ATGCGGGAGCCAGTGCAACATCAGCACCAGCACCAACACCGGCAGTGGGA GGAGGGAAGGGAGGAGGGGGAGGAAGAAGAGGGAAAAGAACCCGGGCTGC GGAAGCGGCAGCAGCCGCCGGCACGCAGCTGACCATACGGGTGGCAGTCG CAGAAGCACGAGCCCAGGCAGCTGCAGGAGGAGGAGGAGGGGGAAGGGAT AGCAGGATGGATACAGGAGGGGATCCTGGAAGGGTAGGAGTGGGGGGAGT CGGGGCGGACGAAGCAGTAAGAGTAGGAGGAGGAGAGGGAACGAGAGGAA TCCCTACTTTGCTCTCTTTACCCGGAGAAAAGGCAACACGAGCACTTGCA ACCATTGCTAGAATTCGTGCAGCACTTGCAAGGGAAAGGGAGAAGGGAGA AGGGAAAGAGAAACATAGTAGGAGCGCTTCGACGAGGTGGAAGAGGGGGA GGGGAAGGAGGAGAAGGAGGGGGAGGATGAGGGGGAGGAGGGGGAGGAAG AGGAGGAAGAGGAGGAAGAGGAGGGGGAGGAGGGGGAGGAGGGGGAGGAG GGGAAGGAGGGGAAGGAGGAGGTGGACGAGGAGGAAGTGGACGAGAAGGA GGTGGACGAGGAGGGAGACGAGGAGAAGAAGAGAAAGAAGAAGAAGAGGA AGAAGAAGAGGATGAAGAGGAAAAAGAAGACGAACAAGAAGACGAACAAG AAGAAGGAGAGGAAGAAGAAGAAGAGGAAGAGGGAGAAGATGAAGAGGAA GGAGATGAAGAGGAAGAGGAAGAAGAAAAAGAAGAAGGAGGAGGAGGAGG AGGAGGAGGAGGGGGAGGAGGAGGGCGACGAGAAGGGGGTGGAAGGGGAA GGGGAGGAGGAGGAGGAGGAGGCGGTGGAAGCAGAGGGGAAGGAGAAGCA GCAGGAGGAGGAGGAGGAGGAGAAGGGGGAGGAGGAGAAGGGAAATAAAT TTTAATTCGAAGTCAAGTTTTCTCGCCGTTACATGATGTATATTTAGGAA ATCAACCCAACTAAACCGCAGGCGTGCACCGACCTGGCACGCAAGACAAA CTACGAAGTGAGAAATACGCTCAAGAAGGGCGCGAAAAGGACGAGGTGGG GCTGCACGACTCCAAGCACAACGTCTCAAACGAGCTGCGCTGTTAGAAGA CATGCAGCAACAAAAGCTGCAGAAGGAAGCCTTTGAGCAGACGTATCGCG ACGCCACTTAACGACAGCTCGAGGTGTGGACAGAGGAGCCCGGCACCAAC AGGCGCAAGACGAAAAGAAGCGCCAATTAAATATGGAAATTAAGACGTAT CTGAAACAGCAGCGACAAGAGACCCAAGCCACATGACAGGCCCTTCTGGA CGTGCGACCACAGTCGACGCATTCTCTGGTGGATGATACTCAGATGTATT TTCAAGCTTGCATACACCAGGAGATGACGAAAAAGCCTACCCTCGGCAAG TCCTTTGTTTCACCTGCATCAAGTTCACGAGGCTCGTGAAGCCGTTCATA CTGCCTGCGATCCTCAATCCTCATACATGCCGTTGTCCGGGCACGGGTTT GGAGACGACGGGGAATTCATATCCTGCAGCGAGTAAACGGACTGGAGATG CAACAGGAAGCAAGGCGGTACGGATAGCGAAACCGACCCGCAATAGCACT AATAAGTCCGCAAAAAAGAAATAACTTCCTGATGATATTGATTTATGTAT TGTGCTTTTGAATTCAAATGGAGTGGGATGCTCCACACATACAGTATAGG CCTGCGTTAAGCGCGCGCGGTGAAAAGCCCTTCTGGAAAATGCATTTAAA AAAAAAAACAGCCAAGGCGAAGGCACCAACACCAAAACTGCGACTATCAC ATACAACCTATGGTTGGACGGCGCGTAGAATCTCTAAGCGAAGAGGGTAT AATGAGAAAGACGCCTTCGTGCGGGATGACCGGCAGCCAAAGGAGCGGTT TGTTTAGAGCGGGATGGCGTC
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Coding sequence (CDS) from alignment at chr14:460735..463855+

>NO14G01460.1 ID=NO14G01460.1|Name=NO14G01460.1|organism=Nannochloropsis oceanica|type=CDS|length=1950bp|location=Sequence derived from alignment at chr14:460735..463855+ (Nannochloropsis oceanica)
ATGACGCTCAGTACCAGAGCTCTCAGTGATCTGCTGAAGAACGTGGTGCG
ACGCAGACCCACAGCGATGACCAAGGAGGCATGGAGCGAATCATGCCCCG
ATTGGTTGAGGCGACTGGGAGGGATGGGCCCTAAAAGGTTTTGCCGGGAT
GCGGTTTCGGTGAAGGAGATGTGGGACGAGACTTTCCGGGTGGGGGGCCT
ACGAAACCAGCGGGTGTTTCACAATCGGGTTTCCACGGATGGTGTCTTGG
TGTCGGTCTTCTTCCACGTGGCGAAGGAGAGACTGGAGAGGGAGAAAGCG
GAGAGGGTCAGAGTGGAGAAGGAGGACGAAGAGAAGGAGATGCTGGAACG
TCAGCAGGGGCAGGAAAACCTGCAGCCAGTCAGAGAGCGACGCATTGTCG
CGATCGATCCCGGTCGCGTCAACCTGGTCACGGCGTTGGACTCGCAGACG
GGCAAGATCAAGACCTTGACGCGTCGTGCGTACTACGAAAAGGGGCGGAT
CAACGAGTGCAAGAGAAAGTTTAGCTCTTGGGAGGACTCACTCGATGACA
TCAATACCGCCTTTTCGAGGACCACGATGAAGACCTGCTGTCCCGACTTG
CGTAGCGCTCACAGGGAGCTGATCGTACAGCATTACCACCGATTGTGGGA
TGCCAGGTGCGAAAAGAAACGGGCGCGTGCGCATATGGCGGTGTATGCGG
GAAAGCAGAAGGTTTTGGATGGCTTTTTTGCGGGCTTGACGGGGCCAGGG
CAGGCGAAGCCTATTATCGCGTATGGAGCGGGGATTTTCTCGCACACAGG
CAAGGAAGAGATGAGCGTTCCGGTCAATAGGGTGCTCCGGGTGTGCAAAA
AGCACTACAGAACAGTGTATGTACCCGAGCACCTGACGACAAAGGTACAA
CTCGATTGTGGGCAGCGTCTAACCCCAATTGCAAGAAGGGCAGGAGGAGA
AGGAGGATCAGTTGCAGGAGGAGGAGGAAGGGAAGAAGAAGGAGGAGGAG
GAGGAGGAGGAGGACGAGAAGGAGGGGGAGGAGGCGGCGGAAGACGAGAA
GAAGAAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAAG
AGGCCAAGGCAAGAAAGCTGGGGGAGGAACGGAAGTGGGAGGGAGGGAAT
ATGCGGGAGCCAGTGCAACATCAGCACCAGCACCAACACCGGCAGTGGGA
GGAGGGAAGGGAGGAGGGGGAGGAAGAAGAGGGAAAAGAACCCGGGCTGC
GGAAGCGGCAGCAGCCGCCGGCACGCAGCTGACCATACGGGTGGCAGTCG
CAGAAGCACGAGCCCAGGCAGCTGCAGGAGGAGGAGGAGGGGGAAGGGAT
AGCAGGATGGATACAGGAGGGGATCCTGGAAGGGTAGGAGTGGGGGGAGT
CGGGGCGGACGAAGCAGAGCGCTTCGACGAGGTGGAAGAGGGGGAGGGGA
AGGAGGAGAAGGAGGGGGAGGATGAGGGGGAGGAGGGGGAGGAAGAGGAG
GAAGAGGAGGAAGAGGAGGGGGAGGAGGGGGAGGAGGGGGAGGAGGGGAA
GGAGGGGAAGGAGGAGGTGGACGAGGAGGAAGTGGACGAGAAGGAGGTGG
ACGAGGAGGGAGACGAGGAGAAGAAGAGAAAGAAGAAGAAGAGGAAGAAG
AAGAGGATGAAGAGGAAAAAGAAGACGAACAAGAAGACGAACAAGAAGAA
GGAGAGGAAGAAGAAGAAGAGGAAGAGGGAGAAGATGAAGAGGAAGGAGA
TGAAGAGGAAGAGGAAGAAGAAAAAGAAGAAGGAGGAGGAGGAGGAGGAG
GAGGAGGGGGAGGAGGAGGGCGACGAGAAGGGGGTGGAAGGGGAAGGGGA
GGAGGAGGAGGAGGAGGCGGTGGAAGCAGAGGGGAAGGAGAAGCAGCAGG
AGGAGGAGGAGGAGGAGAAGGGGGAGGAGGAGAAGGGAAATAAATTTTAA
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Synonyms
Publications