NO14G01310, NO14G01310 (gene) Nannochloropsis oceanica

Overview
NameNO14G01310
Unique NameNO14G01310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1563
Alignment locationchr14:417350..418912 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:417350..418912 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01310.1NO14G01310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01310.1NO14G01310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01310 ID=NO14G01310|Name=NO14G01310|organism=Nannochloropsis oceanica|type=gene|length=1563bp
ATGCACAGTCTTCCTCCTTCCTGTCCTCCTCTACCTCGACCTCCCCTGCT
GCATAATCCCCATTACCAGCAGCAGCGTAATAGCAGCAGCAACAGCAGCA
GCCGCAGCAGCCGCAGCAGCAGCATAACCGCAGCAGCAGCAGTTGACGAA
AAAGACCGGAAACAAAAAATAGTGATGTACCATGAAGACGACGACATCGA
CAAGAAGAAGGAGGACGGGGAGGAGAAAGAACAAGAAGTGGAGGCAGCAC
TCAAAGAATCCCTAGGCTTCCTGGTCGACTTGACGGATTTTCCCGGTCTT
CTTTTGAGACCCGTTTCCTTTCGATGCTTACCTGCTCCTCCCTCACTACT
CCTTCCTCGGCTGGTTTCGGCACGTGgtgaaggaacgtgtgactgggttt
tgggatcgcgaagaggaggcccagagagggaaggagggagggggtgaaga
tggagctagatttcgtgccagGACTGAGGGACCCTGTTCCGTCGAGGCAT
GTGCAGGGAGTGATGGAGAACGCTGCTCGACGCGTGGCGCAAGCCAACAT
CCTCTCCCTCCCCCCTCCTTCTCCACCTTCCTCTCTCTCCCCGGAGGTGC
GGGCGGCAGAGCTCATGCTTTCGAAGGGCGAGATGAAAGAAGGGGGGGAG
AGAGGGAAAGAGGGAGCGATGAGGGTGGGTAGGGGGTTGGTGGAATCCAC
ATTGCTGCTGCTGGGGGTGGAGCATTCGTTGTCTTTGCCCGAAGGCGGGT
TCAAGGGGGAGGGAGGCGGGCTGCTAGGCACGGAGGAGGAAGAAATGACG
TTTCGAGTGCTGGAAGGGTTGGGGAACGTGGTTGCTGAGGAGGGAGGGAA
GGAGAAACGGCAGCAAATGTGGGACgtgggttatagggccagacccgaca
gcttgacagtcatcctcatcgtcagacataattgcagcgaggtcactagt
tgttgccttggtcctttatcggcaggatgacctgggtacttcatcgacag
gttaatcctatgggccagggcgaaactggatgagtatttcgattggtgcg
gggggaagggcgactaagcggacacagcgaaaaaaacaaattgcagtgga
aaataactccagccggtggctcatgacagggagcagcaagttccctgacc
ctgctcagatctttcaagctctccttttcatgccttgttgtgtcgcgtcg
ctcgagcgagacttcggcattgcgagcaacgtattgactgggcatcgcac
ctagCTTGATCAGGCGTCTGTGGAGATTGCCATGCTTCTGAACATGAATA
TGGAGAGAATTGACATCCGGGAGCTGACTGCTACGGAGGCGGAAGAAGCC
ATGCCACGACGACTGCGGAACAAGGAGGATTTCAGAAGTTCTTTCATTTG
GATGAGTCGGTGGCGGAGGGGGAGAAGGAGGATTACGACGCCGAGGCCGA
GGAGAATGATAAACAGGCGACGGAAACAACGAGGTATGGAGCTAACGATG
GTCCTGATGACGATGAGATTGACGGATTATGATGATGATGATGACGATGA
TGGTGATGCGTAA
back to top

protein sequence of NO14G01310.1

>NO14G01310.1-protein ID=NO14G01310.1-protein|Name=NO14G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=363bp
MHSLPPSCPPLPRPPLLHNPHYQQQRNSSSNSSSRSSRSSSITAAAAVDE
KDRKQKIVMYHEDDDIDKKKEDGEEKEQEVEAALKESLGFLVDLTDFPGL
LLRPVSFRCLPAPPSLLLPRLVSARGLRDPVPSRHVQGVMENAARRVAQA
NILSLPPPSPPSSLSPEVRAAELMLSKGEMKEGGERGKEGAMRVGRGLVE
STLLLLGVEHSLSLPEGGFKGEGGGLLGTEEEEMTFRVLEGLGNVVAEEG
GKEKRQQMWDLDQASVEIAMLLNMNMERIDIRELTATEAEEAMPRRLRNK
EDFRSSFIWMSRWRRGRRRITTPRPRRMINRRRKQRGMELTMVLMTMRLT
DYDDDDDDDGDA*
back to top
Synonyms
Publications