NO14G01310.1, NO14G01310.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G01310.1
Unique NameNO14G01310.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1089
Alignment locationchr14:417350..418912 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:417350..418912 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G01310.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01310NO14G01310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G01310.1NO14G01310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G01310.1.cds1NO14G01310.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G01310.1.cds2NO14G01310.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G01310.1.cds3NO14G01310.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G01310.1 ID=NO14G01310.1|Name=NO14G01310.1|organism=Nannochloropsis oceanica|type=mRNA|length=1089bp
ATGCACAGTCTTCCTCCTTCCTGTCCTCCTCTACCTCGACCTCCCCTGCT
GCATAATCCCCATTACCAGCAGCAGCGTAATAGCAGCAGCAACAGCAGCA
GCCGCAGCAGCCGCAGCAGCAGCATAACCGCAGCAGCAGCAGTTGACGAA
AAAGACCGGAAACAAAAAATAGTGATGTACCATGAAGACGACGACATCGA
CAAGAAGAAGGAGGACGGGGAGGAGAAAGAACAAGAAGTGGAGGCAGCAC
TCAAAGAATCCCTAGGCTTCCTGGTCGACTTGACGGATTTTCCCGGTCTT
CTTTTGAGACCCGTTTCCTTTCGATGCTTACCTGCTCCTCCCTCACTACT
CCTTCCTCGGCTGGTTTCGGCACGTGGACTGAGGGACCCTGTTCCGTCGA
GGCATGTGCAGGGAGTGATGGAGAACGCTGCTCGACGCGTGGCGCAAGCC
AACATCCTCTCCCTCCCCCCTCCTTCTCCACCTTCCTCTCTCTCCCCGGA
GGTGCGGGCGGCAGAGCTCATGCTTTCGAAGGGCGAGATGAAAGAAGGGG
GGGAGAGAGGGAAAGAGGGAGCGATGAGGGTGGGTAGGGGGTTGGTGGAA
TCCACATTGCTGCTGCTGGGGGTGGAGCATTCGTTGTCTTTGCCCGAAGG
CGGGTTCAAGGGGGAGGGAGGCGGGCTGCTAGGCACGGAGGAGGAAGAAA
TGACGTTTCGAGTGCTGGAAGGGTTGGGGAACGTGGTTGCTGAGGAGGGA
GGGAAGGAGAAACGGCAGCAAATGTGGGACCTTGATCAGGCGTCTGTGGA
GATTGCCATGCTTCTGAACATGAATATGGAGAGAATTGACATCCGGGAGC
TGACTGCTACGGAGGCGGAAGAAGCCATGCCACGACGACTGCGGAACAAG
GAGGATTTCAGAAGTTCTTTCATTTGGATGAGTCGGTGGCGGAGGGGGAG
AAGGAGGATTACGACGCCGAGGCCGAGGAGAATGATAAACAGGCGACGGA
AACAACGAGGTATGGAGCTAACGATGGTCCTGATGACGATGAGATTGACG
GATTATGATGATGATGATGACGATGATGGTGATGCGTAA
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protein sequence of NO14G01310.1

>NO14G01310.1-protein ID=NO14G01310.1-protein|Name=NO14G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=363bp
MHSLPPSCPPLPRPPLLHNPHYQQQRNSSSNSSSRSSRSSSITAAAAVDE
KDRKQKIVMYHEDDDIDKKKEDGEEKEQEVEAALKESLGFLVDLTDFPGL
LLRPVSFRCLPAPPSLLLPRLVSARGLRDPVPSRHVQGVMENAARRVAQA
NILSLPPPSPPSSLSPEVRAAELMLSKGEMKEGGERGKEGAMRVGRGLVE
STLLLLGVEHSLSLPEGGFKGEGGGLLGTEEEEMTFRVLEGLGNVVAEEG
GKEKRQQMWDLDQASVEIAMLLNMNMERIDIRELTATEAEEAMPRRLRNK
EDFRSSFIWMSRWRRGRRRITTPRPRRMINRRRKQRGMELTMVLMTMRLT
DYDDDDDDDGDA*
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mRNA from alignment at chr14:417350..418912+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G01310.1 ID=NO14G01310.1|Name=NO14G01310.1|organism=Nannochloropsis oceanica|type=mRNA|length=1563bp|location=Sequence derived from alignment at chr14:417350..418912+ (Nannochloropsis oceanica)
ATGCACAGTCTTCCTCCTTCCTGTCCTCCTCTACCTCGACCTCCCCTGCT
GCATAATCCCCATTACCAGCAGCAGCGTAATAGCAGCAGCAACAGCAGCA
GCCGCAGCAGCCGCAGCAGCAGCATAACCGCAGCAGCAGCAGTTGACGAA
AAAGACCGGAAACAAAAAATAGTGATGTACCATGAAGACGACGACATCGA
CAAGAAGAAGGAGGACGGGGAGGAGAAAGAACAAGAAGTGGAGGCAGCAC
TCAAAGAATCCCTAGGCTTCCTGGTCGACTTGACGGATTTTCCCGGTCTT
CTTTTGAGACCCGTTTCCTTTCGATGCTTACCTGCTCCTCCCTCACTACT
CCTTCCTCGGCTGGTTTCGGCACGTGGTGAAGGAACGTGTGACTGGGTTT
TGGGATCGCGAAGAGGAGGCCCAGAGAGGGAAGGAGGGAGGGGGTGAAGA
TGGAGCTAGATTTCGTGCCAGGACTGAGGGACCCTGTTCCGTCGAGGCAT
GTGCAGGGAGTGATGGAGAACGCTGCTCGACGCGTGGCGCAAGCCAACAT
CCTCTCCCTCCCCCCTCCTTCTCCACCTTCCTCTCTCTCCCCGGAGGTGC
GGGCGGCAGAGCTCATGCTTTCGAAGGGCGAGATGAAAGAAGGGGGGGAG
AGAGGGAAAGAGGGAGCGATGAGGGTGGGTAGGGGGTTGGTGGAATCCAC
ATTGCTGCTGCTGGGGGTGGAGCATTCGTTGTCTTTGCCCGAAGGCGGGT
TCAAGGGGGAGGGAGGCGGGCTGCTAGGCACGGAGGAGGAAGAAATGACG
TTTCGAGTGCTGGAAGGGTTGGGGAACGTGGTTGCTGAGGAGGGAGGGAA
GGAGAAACGGCAGCAAATGTGGGACGTGGGTTATAGGGCCAGACCCGACA
GCTTGACAGTCATCCTCATCGTCAGACATAATTGCAGCGAGGTCACTAGT
TGTTGCCTTGGTCCTTTATCGGCAGGATGACCTGGGTACTTCATCGACAG
GTTAATCCTATGGGCCAGGGCGAAACTGGATGAGTATTTCGATTGGTGCG
GGGGGAAGGGCGACTAAGCGGACACAGCGAAAAAAACAAATTGCAGTGGA
AAATAACTCCAGCCGGTGGCTCATGACAGGGAGCAGCAAGTTCCCTGACC
CTGCTCAGATCTTTCAAGCTCTCCTTTTCATGCCTTGTTGTGTCGCGTCG
CTCGAGCGAGACTTCGGCATTGCGAGCAACGTATTGACTGGGCATCGCAC
CTAGCTTGATCAGGCGTCTGTGGAGATTGCCATGCTTCTGAACATGAATA
TGGAGAGAATTGACATCCGGGAGCTGACTGCTACGGAGGCGGAAGAAGCC
ATGCCACGACGACTGCGGAACAAGGAGGATTTCAGAAGTTCTTTCATTTG
GATGAGTCGGTGGCGGAGGGGGAGAAGGAGGATTACGACGCCGAGGCCGA
GGAGAATGATAAACAGGCGACGGAAACAACGAGGTATGGAGCTAACGATG
GTCCTGATGACGATGAGATTGACGGATTATGATGATGATGATGACGATGA
TGGTGATGCGTAA
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Coding sequence (CDS) from alignment at chr14:417350..418912+

>NO14G01310.1 ID=NO14G01310.1|Name=NO14G01310.1|organism=Nannochloropsis oceanica|type=CDS|length=1089bp|location=Sequence derived from alignment at chr14:417350..418912+ (Nannochloropsis oceanica)
ATGCACAGTCTTCCTCCTTCCTGTCCTCCTCTACCTCGACCTCCCCTGCT
GCATAATCCCCATTACCAGCAGCAGCGTAATAGCAGCAGCAACAGCAGCA
GCCGCAGCAGCCGCAGCAGCAGCATAACCGCAGCAGCAGCAGTTGACGAA
AAAGACCGGAAACAAAAAATAGTGATGTACCATGAAGACGACGACATCGA
CAAGAAGAAGGAGGACGGGGAGGAGAAAGAACAAGAAGTGGAGGCAGCAC
TCAAAGAATCCCTAGGCTTCCTGGTCGACTTGACGGATTTTCCCGGTCTT
CTTTTGAGACCCGTTTCCTTTCGATGCTTACCTGCTCCTCCCTCACTACT
CCTTCCTCGGCTGGTTTCGGCACGTGGACTGAGGGACCCTGTTCCGTCGA
GGCATGTGCAGGGAGTGATGGAGAACGCTGCTCGACGCGTGGCGCAAGCC
AACATCCTCTCCCTCCCCCCTCCTTCTCCACCTTCCTCTCTCTCCCCGGA
GGTGCGGGCGGCAGAGCTCATGCTTTCGAAGGGCGAGATGAAAGAAGGGG
GGGAGAGAGGGAAAGAGGGAGCGATGAGGGTGGGTAGGGGGTTGGTGGAA
TCCACATTGCTGCTGCTGGGGGTGGAGCATTCGTTGTCTTTGCCCGAAGG
CGGGTTCAAGGGGGAGGGAGGCGGGCTGCTAGGCACGGAGGAGGAAGAAA
TGACGTTTCGAGTGCTGGAAGGGTTGGGGAACGTGGTTGCTGAGGAGGGA
GGGAAGGAGAAACGGCAGCAAATGTGGGACCTTGATCAGGCGTCTGTGGA
GATTGCCATGCTTCTGAACATGAATATGGAGAGAATTGACATCCGGGAGC
TGACTGCTACGGAGGCGGAAGAAGCCATGCCACGACGACTGCGGAACAAG
GAGGATTTCAGAAGTTCTTTCATTTGGATGAGTCGGTGGCGGAGGGGGAG
AAGGAGGATTACGACGCCGAGGCCGAGGAGAATGATAAACAGGCGACGGA
AACAACGAGGTATGGAGCTAACGATGGTCCTGATGACGATGAGATTGACG
GATTATGATGATGATGATGACGATGATGGTGATGCGTAA
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Synonyms
Publications