NO14G00820, NO14G00820 (gene) Nannochloropsis oceanica

Overview
NameNO14G00820
Unique NameNO14G00820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1931
Alignment locationchr14:291947..293877 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:291947..293877 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015425FH2_Formin
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL139nonsL139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00820.1NO14G00820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589850gene_5652Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00820.1NO14G00820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00820 ID=NO14G00820|Name=NO14G00820|organism=Nannochloropsis oceanica|type=gene|length=1931bp
ATGGCTGCCGATAAGACCATTAGTGCCGAAGAGGTCCAGATCTTTTCGGC
TGGCAAGGCCGGGATGAAGGCATCTGTGTTGTCGGCGGAGTTAAAAATCG
CAGCATCTAACCCCAGGCACCAGCCGTCACTTATACACTCGCAGTCAACA
TTATCCTCGGGCAGGCCCCCGCTTCGTCGCTCCTCCTCGTCTTCACTGGC
TGGTCTTCACCTACCTTCACCAGgtagccctgttttttttgctactgcct
caatcaaattgcgcgccgttcatttcgagcgactgacgccagagcgcgct
gaggagtagatgtttatgcgcaagtctagcgtgactcaaagtaccaagat
agcagggggcgggtcttcgatatcaagcgtcctatcgtcaccgtctcagg
gacaacatgtcaaggaactcgcaggactcttctccgttacgcagcgcctc
aagctccctttggcgggtaccgacgtgggcacaagaagtcggccagcttt
cggggctatattgaggctgcgcagactccaaaacgtgggaatcgtatata
attagtttaagaagtcctttccctcctctaaagCACGTGTTGTGAGTGTT
CTGAGTTTTGAGTGCCATTTTCTCTCGGTGGAGCGGCTGCACGGTCTCCT
GGACATCTTGCCGAGTGATGAGGAGGAAAAAAAGCTGATCCAAGCAGCTA
GTTACACACACGATCTTATCAAGCATGCACCTGTTACGATGCCCGACGAT
GTGACGCCATATCCTCCCACACCTCCTATATCCTTGCACGAGGTAGAGCT
GTTCATGCTGGCCACCATGAAGGTACCAAGGATGGGACCCAAGGTGCGGT
GCTTCCACTTTAAGCAGGCATTTCAGGAATCTTTGCAGACATTACGTGGA
AGCTTTGGCAGGCATTTTGGGGGACGTGGTGAAGTCAAACCGATTGgtac
gcgtactggaagtcttactttaccctggtaatactcttaaggcatattct
ggctcgagcagtaagagggtggtggtcaaggtatttaccatcgactcact
ctttcgcgtcgctctgatgaagtccacaacttctggagacatgacttaac
tcgattacctcgtccggctcgctgcggaaaaagGGGAAGGGGCCATCTTG
ATTGTAGTCGAAGATATACCGACTCTGTGTATGGCTGCTGTCTTGCCCGA
CAGCTCCGCGATTTTGCGGGATGTGGGCACGTGGCTTCGTGACTTTGACG
CTCTTAAGCATGAGATTGCCCGAGAAGAGCAGGACTTGGCGACATATGTA
CAAGTGCGCATGGACCAGCAGCAAGCACATCAACAAGCCAAGGAAGTGCG
TCGTGCCGCGACCAAGGCGGCGGAAGAGGCCGAGCTTCAACATAAAATCC
AAGCGACGCGGCGAGGGGCCGAACGGCATCAGGAACTCCGTCCGCTGACG
GAGCGGCTGGCTATGGAGAAAGAAGACACCACCGCGCAAATGGGGGAGCA
TTTCCTACGCTATTTGGAGGAGGCTGAAGAGGGCTTTAATGGTGGCAAGG
GAGATGGTGTATTGTGGGAGGACGTGCTCGCGGTACTGCGTGCGTCCGGG
CCCTCAATGCCGTTGGATCTCAAGTTGGGTCTTCTGCTGCGACAGAAGTC
GCTTCAGATGGGTGATGGAATGATGAAAGGAGAGGATGTAACTGGTGAGG
CGTTTTGTGGTCGAAACCCGGTCGAAGACGAGGTGGAGAGGATTTAGCGT
TTGAACGAGGAGCTGGGCTCTTCACAAGGAGACGACGTGGCAGAGCAACG
GTTGCTGCAGGTGGCAAGTCGTTGGCTGGGTCCCGGGATCAAGGCCAACA
AATGCTTGGCCTCCTTGCAGGTGATGAAAATGGATTCAAATGCAGCGGCA
AGTTTCACATCCGCAACAGTTGCATCAGCTG
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protein sequence of NO14G00820.1

>NO14G00820.1-protein ID=NO14G00820.1-protein|Name=NO14G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=400bp
MAADKTISAEEVQIFSAGKAGMKASVLSAELKIAASNPRHQPSLIHSQST
LSSGRPPLRRSSSSSLAGLHLPSPARVVSVLSFECHFLSVERLHGLLDIL
PSDEEEKKLIQAASYTHDLIKHAPVTMPDDVTPYPPTPPISLHEVELFML
ATMKVPRMGPKVRCFHFKQAFQESLQTLRGSFGRHFGGRGEVKPIGEGAI
LIVVEDIPTLCMAAVLPDSSAILRDVGTWLRDFDALKHEIAREEQDLATY
VQVRMDQQQAHQQAKEVRRAATKAAEEAELQHKIQATRRGAERHQELRPL
TERLAMEKEDTTAQMGEHFLRYLEEAEEGFNGGKGDGVLWEDVLAVLRAS
GPSMPLDLKLGLLLRQKSLQMGDGMMKGEDVTGEAFCGRNPVEDEVERI*
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Synonyms
Publications