NO14G00820.1, NO14G00820.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G00820.1
Unique NameNO14G00820.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1384
Alignment locationchr14:291947..293877 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:291947..293877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00820.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00820NO14G00820Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G00820.1NO14G00820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G00820.1.cds1NO14G00820.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00820.1.cds2NO14G00820.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00820.1.cds3NO14G00820.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G00820.1 ID=NO14G00820.1|Name=NO14G00820.1|organism=Nannochloropsis oceanica|type=mRNA|length=1384bp
ATGGCTGCCGATAAGACCATTAGTGCCGAAGAGGTCCAGATCTTTTCGGC
TGGCAAGGCCGGGATGAAGGCATCTGTGTTGTCGGCGGAGTTAAAAATCG
CAGCATCTAACCCCAGGCACCAGCCGTCACTTATACACTCGCAGTCAACA
TTATCCTCGGGCAGGCCCCCGCTTCGTCGCTCCTCCTCGTCTTCACTGGC
TGGTCTTCACCTACCTTCACCAGCACGTGTTGTGAGTGTTCTGAGTTTTG
AGTGCCATTTTCTCTCGGTGGAGCGGCTGCACGGTCTCCTGGACATCTTG
CCGAGTGATGAGGAGGAAAAAAAGCTGATCCAAGCAGCTAGTTACACACA
CGATCTTATCAAGCATGCACCTGTTACGATGCCCGACGATGTGACGCCAT
ATCCTCCCACACCTCCTATATCCTTGCACGAGGTAGAGCTGTTCATGCTG
GCCACCATGAAGGTACCAAGGATGGGACCCAAGGTGCGGTGCTTCCACTT
TAAGCAGGCATTTCAGGAATCTTTGCAGACATTACGTGGAAGCTTTGGCA
GGCATTTTGGGGGACGTGGTGAAGTCAAACCGATTGGGGAAGGGGCCATC
TTGATTGTAGTCGAAGATATACCGACTCTGTGTATGGCTGCTGTCTTGCC
CGACAGCTCCGCGATTTTGCGGGATGTGGGCACGTGGCTTCGTGACTTTG
ACGCTCTTAAGCATGAGATTGCCCGAGAAGAGCAGGACTTGGCGACATAT
GTACAAGTGCGCATGGACCAGCAGCAAGCACATCAACAAGCCAAGGAAGT
GCGTCGTGCCGCGACCAAGGCGGCGGAAGAGGCCGAGCTTCAACATAAAA
TCCAAGCGACGCGGCGAGGGGCCGAACGGCATCAGGAACTCCGTCCGCTG
ACGGAGCGGCTGGCTATGGAGAAAGAAGACACCACCGCGCAAATGGGGGA
GCATTTCCTACGCTATTTGGAGGAGGCTGAAGAGGGCTTTAATGGTGGCA
AGGGAGATGGTGTATTGTGGGAGGACGTGCTCGCGGTACTGCGTGCGTCC
GGGCCCTCAATGCCGTTGGATCTCAAGTTGGGTCTTCTGCTGCGACAGAA
GTCGCTTCAGATGGGTGATGGAATGATGAAAGGAGAGGATGTAACTGGTG
AGGCGTTTTGTGGTCGAAACCCGGTCGAAGACGAGGTGGAGAGGATTTAG
CGTTTGAACGAGGAGCTGGGCTCTTCACAAGGAGACGACGTGGCAGAGCA
ACGGTTGCTGCAGGTGGCAAGTCGTTGGCTGGGTCCCGGGATCAAGGCCA
ACAAATGCTTGGCCTCCTTGCAGGTGATGAAAATGGATTCAAATGCAGCG
GCAAGTTTCACATCCGCAACAGTTGCATCAGCTG
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protein sequence of NO14G00820.1

>NO14G00820.1-protein ID=NO14G00820.1-protein|Name=NO14G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=400bp
MAADKTISAEEVQIFSAGKAGMKASVLSAELKIAASNPRHQPSLIHSQST
LSSGRPPLRRSSSSSLAGLHLPSPARVVSVLSFECHFLSVERLHGLLDIL
PSDEEEKKLIQAASYTHDLIKHAPVTMPDDVTPYPPTPPISLHEVELFML
ATMKVPRMGPKVRCFHFKQAFQESLQTLRGSFGRHFGGRGEVKPIGEGAI
LIVVEDIPTLCMAAVLPDSSAILRDVGTWLRDFDALKHEIAREEQDLATY
VQVRMDQQQAHQQAKEVRRAATKAAEEAELQHKIQATRRGAERHQELRPL
TERLAMEKEDTTAQMGEHFLRYLEEAEEGFNGGKGDGVLWEDVLAVLRAS
GPSMPLDLKLGLLLRQKSLQMGDGMMKGEDVTGEAFCGRNPVEDEVERI*
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mRNA from alignment at chr14:291947..293877+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G00820.1 ID=NO14G00820.1|Name=NO14G00820.1|organism=Nannochloropsis oceanica|type=mRNA|length=1931bp|location=Sequence derived from alignment at chr14:291947..293877+ (Nannochloropsis oceanica)
ATGGCTGCCGATAAGACCATTAGTGCCGAAGAGGTCCAGATCTTTTCGGC
TGGCAAGGCCGGGATGAAGGCATCTGTGTTGTCGGCGGAGTTAAAAATCG
CAGCATCTAACCCCAGGCACCAGCCGTCACTTATACACTCGCAGTCAACA
TTATCCTCGGGCAGGCCCCCGCTTCGTCGCTCCTCCTCGTCTTCACTGGC
TGGTCTTCACCTACCTTCACCAGGTAGCCCTGTTTTTTTTGCTACTGCCT
CAATCAAATTGCGCGCCGTTCATTTCGAGCGACTGACGCCAGAGCGCGCT
GAGGAGTAGATGTTTATGCGCAAGTCTAGCGTGACTCAAAGTACCAAGAT
AGCAGGGGGCGGGTCTTCGATATCAAGCGTCCTATCGTCACCGTCTCAGG
GACAACATGTCAAGGAACTCGCAGGACTCTTCTCCGTTACGCAGCGCCTC
AAGCTCCCTTTGGCGGGTACCGACGTGGGCACAAGAAGTCGGCCAGCTTT
CGGGGCTATATTGAGGCTGCGCAGACTCCAAAACGTGGGAATCGTATATA
ATTAGTTTAAGAAGTCCTTTCCCTCCTCTAAAGCACGTGTTGTGAGTGTT
CTGAGTTTTGAGTGCCATTTTCTCTCGGTGGAGCGGCTGCACGGTCTCCT
GGACATCTTGCCGAGTGATGAGGAGGAAAAAAAGCTGATCCAAGCAGCTA
GTTACACACACGATCTTATCAAGCATGCACCTGTTACGATGCCCGACGAT
GTGACGCCATATCCTCCCACACCTCCTATATCCTTGCACGAGGTAGAGCT
GTTCATGCTGGCCACCATGAAGGTACCAAGGATGGGACCCAAGGTGCGGT
GCTTCCACTTTAAGCAGGCATTTCAGGAATCTTTGCAGACATTACGTGGA
AGCTTTGGCAGGCATTTTGGGGGACGTGGTGAAGTCAAACCGATTGGTAC
GCGTACTGGAAGTCTTACTTTACCCTGGTAATACTCTTAAGGCATATTCT
GGCTCGAGCAGTAAGAGGGTGGTGGTCAAGGTATTTACCATCGACTCACT
CTTTCGCGTCGCTCTGATGAAGTCCACAACTTCTGGAGACATGACTTAAC
TCGATTACCTCGTCCGGCTCGCTGCGGAAAAAGGGGAAGGGGCCATCTTG
ATTGTAGTCGAAGATATACCGACTCTGTGTATGGCTGCTGTCTTGCCCGA
CAGCTCCGCGATTTTGCGGGATGTGGGCACGTGGCTTCGTGACTTTGACG
CTCTTAAGCATGAGATTGCCCGAGAAGAGCAGGACTTGGCGACATATGTA
CAAGTGCGCATGGACCAGCAGCAAGCACATCAACAAGCCAAGGAAGTGCG
TCGTGCCGCGACCAAGGCGGCGGAAGAGGCCGAGCTTCAACATAAAATCC
AAGCGACGCGGCGAGGGGCCGAACGGCATCAGGAACTCCGTCCGCTGACG
GAGCGGCTGGCTATGGAGAAAGAAGACACCACCGCGCAAATGGGGGAGCA
TTTCCTACGCTATTTGGAGGAGGCTGAAGAGGGCTTTAATGGTGGCAAGG
GAGATGGTGTATTGTGGGAGGACGTGCTCGCGGTACTGCGTGCGTCCGGG
CCCTCAATGCCGTTGGATCTCAAGTTGGGTCTTCTGCTGCGACAGAAGTC
GCTTCAGATGGGTGATGGAATGATGAAAGGAGAGGATGTAACTGGTGAGG
CGTTTTGTGGTCGAAACCCGGTCGAAGACGAGGTGGAGAGGATTTAGCGT
TTGAACGAGGAGCTGGGCTCTTCACAAGGAGACGACGTGGCAGAGCAACG
GTTGCTGCAGGTGGCAAGTCGTTGGCTGGGTCCCGGGATCAAGGCCAACA
AATGCTTGGCCTCCTTGCAGGTGATGAAAATGGATTCAAATGCAGCGGCA
AGTTTCACATCCGCAACAGTTGCATCAGCTG
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Coding sequence (CDS) from alignment at chr14:291947..293877+

>NO14G00820.1 ID=NO14G00820.1|Name=NO14G00820.1|organism=Nannochloropsis oceanica|type=CDS|length=1200bp|location=Sequence derived from alignment at chr14:291947..293877+ (Nannochloropsis oceanica)
ATGGCTGCCGATAAGACCATTAGTGCCGAAGAGGTCCAGATCTTTTCGGC
TGGCAAGGCCGGGATGAAGGCATCTGTGTTGTCGGCGGAGTTAAAAATCG
CAGCATCTAACCCCAGGCACCAGCCGTCACTTATACACTCGCAGTCAACA
TTATCCTCGGGCAGGCCCCCGCTTCGTCGCTCCTCCTCGTCTTCACTGGC
TGGTCTTCACCTACCTTCACCAGCACGTGTTGTGAGTGTTCTGAGTTTTG
AGTGCCATTTTCTCTCGGTGGAGCGGCTGCACGGTCTCCTGGACATCTTG
CCGAGTGATGAGGAGGAAAAAAAGCTGATCCAAGCAGCTAGTTACACACA
CGATCTTATCAAGCATGCACCTGTTACGATGCCCGACGATGTGACGCCAT
ATCCTCCCACACCTCCTATATCCTTGCACGAGGTAGAGCTGTTCATGCTG
GCCACCATGAAGGTACCAAGGATGGGACCCAAGGTGCGGTGCTTCCACTT
TAAGCAGGCATTTCAGGAATCTTTGCAGACATTACGTGGAAGCTTTGGCA
GGCATTTTGGGGGACGTGGTGAAGTCAAACCGATTGGGGAAGGGGCCATC
TTGATTGTAGTCGAAGATATACCGACTCTGTGTATGGCTGCTGTCTTGCC
CGACAGCTCCGCGATTTTGCGGGATGTGGGCACGTGGCTTCGTGACTTTG
ACGCTCTTAAGCATGAGATTGCCCGAGAAGAGCAGGACTTGGCGACATAT
GTACAAGTGCGCATGGACCAGCAGCAAGCACATCAACAAGCCAAGGAAGT
GCGTCGTGCCGCGACCAAGGCGGCGGAAGAGGCCGAGCTTCAACATAAAA
TCCAAGCGACGCGGCGAGGGGCCGAACGGCATCAGGAACTCCGTCCGCTG
ACGGAGCGGCTGGCTATGGAGAAAGAAGACACCACCGCGCAAATGGGGGA
GCATTTCCTACGCTATTTGGAGGAGGCTGAAGAGGGCTTTAATGGTGGCA
AGGGAGATGGTGTATTGTGGGAGGACGTGCTCGCGGTACTGCGTGCGTCC
GGGCCCTCAATGCCGTTGGATCTCAAGTTGGGTCTTCTGCTGCGACAGAA
GTCGCTTCAGATGGGTGATGGAATGATGAAAGGAGAGGATGTAACTGGTG
AGGCGTTTTGTGGTCGAAACCCGGTCGAAGACGAGGTGGAGAGGATTTAG
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Synonyms
Publications