NO14G00110, NO14G00110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G00110 vs. NCBI_GenBank
Match: EWM24786.1 (glycoprotein fp21 [Nannochloropsis gaditana]) HSP 1 Score: 185.7 bits (470), Expect = 1.400e-43 Identity = 100/160 (62.50%), Postives = 119/160 (74.38%), Query Frame = 0 Query: 1 MNVRIILKNGQELDAAVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLPTVEKATFENVLRFLRLHAHARMHDIPKPITQSSLGEVVQEEYSDYIQSLSYRDLIQVLELAHFLVLEPLLRLALARLHFVLKATPLEEFKRLFLFQNDLTPEEEAVGRE 161 MNVRI+LKNGQELDA V+AA L LP+VEK FE V+RFLR+HA + DIPKPI ++SLGE+VQ+EYS++I+SL YRDL+QV+ELAHFLVL+PLLRL+LAR+HF+LKATPLEEFKRLFLFQNDLT EEE V RE Sbjct: 1 MNVRIVLKNGQELDAPVEAA---LLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRE 157
BLAST of NO14G00110 vs. NCBI_GenBank
Match: XP_003879810.1 (protein F46A9.4, confirmed by transcript evidence, related [Neospora caninum Liverpool] >CBZ49775.1 protein F46A9.4, confirmed by transcript evidence, related [Neospora caninum Liverpool] >CEL64363.1 TPA: Protein F46A9.4, confirmed by transcript evidence, related [Neospora caninum Liverpool]) HSP 1 Score: 68.2 bits (165), Expect = 3.200e-8 Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 0 Query: 48 LTLPTVEKATFENVLRFLRLHAHARMHDIPKPITQSSLGEVVQEEYSDYIQSLSYRDLIQVLEL-AHFLVLEPLLRLALARLHFVLKATPLEEFKRLFLFQNDLTPEEEAVGRE 161 + LP VE + ++ + H + +IPKP+ S+L EVV E +I S + ++ L L A++L ++PLL L++A++ ++KA EE +R+F ND TPEEEA RE Sbjct: 49 IPLPNVETCILKKIIEYCEHHYNNPPEEIPKPLKSSNLAEVVSEWDFQFINENSDQKILFALILAANYLNIKPLLDLSVAKVATMIKAKTPEEIRRIFNIVNDFTPEEEAQVRE 162
BLAST of NO14G00110 vs. NCBI_GenBank
Match: XP_002369572.1 (suppressor of kinetochore protein 1, putative [Toxoplasma gondii ME49] >XP_008886921.1 suppressor of kinetochore protein 1, putative [Hammondia hammondi] >CAJ20499.1 skp1 family protein, putative [Toxoplasma gondii RH] >EPR57985.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii GT1] >EPT32444.1 suppressor of kinetochore protein 1, putative [Toxoplasma gondii ME49] >ESS29388.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii VEG] >KEP62514.1 suppressor of kinetochore protein 1, putative [Hammondia hammondi] >KFG30630.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii p89] >KFG35139.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii GAB2-2007-GAL-DOM2] >KFG49136.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii FOU] >KFG60660.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii RUB] >KFH05742.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii VAND] >KFH15625.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii MAS] >CEL71630.1 TPA: S-phase kinase-associated protein, putative [Toxoplasma gondii VEG] >KYF41405.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii ARI] >KYK68439.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii TgCatPRC2] >PIL98491.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii COUG] >PUA88338.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii TgCATBr9]) HSP 1 Score: 67.0 bits (162), Expect = 7.200e-8 Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 0 Query: 48 LTLPTVEKATFENVLRFLRLHAHARMHDIPKPITQSSLGEVVQE-EYSDYIQSLSYRDLIQVLELAHFLVLEPLLRLALARLHFVLKATPLEEFKRLFLFQNDLTPEEEAVGRE 161 + LP V+ + ++ + H +IPKP+ S+L EVV E +Y ++ + L ++ A++L ++PLL L++A++ ++KA EE +R+F ND TPEEEA RE Sbjct: 49 IPLPNVDTCILKKIIEYCEHHXXXPPEEIPKPLKSSNLAEVVSEWDYQFINENSDQKILFALILAANYLNIKPLLDLSVAKVATMIKAKTPEEIRRIFNIVNDFTPEEEAQVRE 162
BLAST of NO14G00110 vs. NCBI_GenBank
Match: PFH31746.1 (putative suppressor of kinetochore protein 1 [Besnoitia besnoiti]) HSP 1 Score: 67.0 bits (162), Expect = 7.200e-8 Identity = 39/114 (34.21%), Postives = 67/114 (58.77%), Query Frame = 0 Query: 48 LTLPTVEKATFENVLRFLRLHAHARMHDIPKPITQSSLGEVVQE-EYSDYIQSLSYRDLIQVLELAHFLVLEPLLRLALARLHFVLKATPLEEFKRLFLFQNDLTPEEEAVGRE 161 + LP VE + ++ + H + +IPKP+ S+L EVV E +Y ++ + L ++ A++L ++PLL L++A++ ++K+ EE +R+F ND TPEEEA RE Sbjct: 49 IPLPNVETCILKKIIEYCEHHYNNLPEEIPKPLKSSNLAEVVSEWDYQFINENSDQKILFALILAANYLNIKPLLDLSVAKVATMIKSKTPEEIRRIFNIVNDFTPEEEAQVRE 162
BLAST of NO14G00110 vs. NCBI_GenBank
Match: XP_009033202.1 (hypothetical protein AURANDRAFT_58667 [Aureococcus anophagefferens] >EGB12114.1 hypothetical protein AURANDRAFT_58667 [Aureococcus anophagefferens]) HSP 1 Score: 66.6 bits (161), Expect = 9.400e-8 Identity = 39/113 (34.51%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 48 LTLPTVEKATFENVLRFLRLHAHARMHDIPKPITQSSLGEVVQEEYSDYIQSLSYRDLIQVLELAHFLVLEPLLRLALARLHFVLKATPLEEFKRLFLFQNDLTPEEEAVGRE 161 + LP V+ V+ F R +A M +I KP+ +++ EVVQE Y++Y+ + L +++ A+++ ++PLL L A + ++K EE ++ F ND TPEEEA RE Sbjct: 38 IPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYV-DVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVRE 149
BLAST of NO14G00110 vs. NCBI_GenBank
Match: EWM25403.1 (glycoprotein fp21 [Nannochloropsis gaditana]) HSP 1 Score: 66.6 bits (161), Expect = 9.400e-8 Identity = 38/113 (33.63%), Postives = 66/113 (58.41%), Query Frame = 0 Query: 48 LTLPTVEKATFENVLRFLRLHAHARMHDIPKPITQSSLGEVVQEEYSDYIQSLSYRDLIQVLELAHFLVLEPLLRLALARLHFVLKATPLEEFKRLFLFQNDLTPEEEAVGRE 161 + LP V+ V+ F + H M+DI KP+ +++ EVVQ+ Y++++ ++ L +++ A+++ ++PLL L A + ++K EE +R F ND TPEEEA RE Sbjct: 101 IPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSANMHEVVQDWYANFV-NVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEEEAQVRE 212
BLAST of NO14G00110 vs. NCBI_GenBank
Match: PHJ26138.1 (suppressor of kinetochore protein 1 [Cystoisospora suis]) HSP 1 Score: 64.3 bits (155), Expect = 4.700e-7 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 0 Query: 48 LTLPTVEKATFENVLRFLRLHAHARMHDIPKPITQSSLGEVVQEEYSDYIQSLSYRDLIQVLEL-AHFLVLEPLLRLALARLHFVLKATPLEEFKRLFLFQNDLTPEEEAVGRE 161 + LP VE V+ + H + +IPKP+ S+L EVV E +I S + ++ L L A++L ++PLL L++A++ ++K EE +R F ND TPEEEA RE Sbjct: 44 IPLPNVETNILRKVIEYCEHHYNNPPDEIPKPLKSSNLAEVVSEWDYQFINDNSDQKVLFALILAANYLNIKPLLDLSVAKVATMVKGQTAEEIRRRFSIVNDFTPEEEAQVRE 157
BLAST of NO14G00110 vs. NCBI_GenBank
Match: XP_002294707.1 (hypothetical protein THAPSDRAFT_38460, partial [Thalassiosira pseudonana CCMP1335] >EED88067.1 hypothetical protein THAPSDRAFT_38460, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 63.9 bits (154), Expect = 6.100e-7 Identity = 36/113 (31.86%), Postives = 66/113 (58.41%), Query Frame = 0 Query: 48 LTLPTVEKATFENVLRFLRLHAHARMHDIPKPITQSSLGEVVQEEYSDYIQSLSYRDLIQVLELAHFLVLEPLLRLALARLHFVLKATPLEEFKRLFLFQNDLTPEEEAVGRE 161 + LP V+ + V+ F + H M +I KP+ +++ EVVQ+ Y+D++ ++ L +++ A+++ ++PLL L A + ++K EE ++ F ND +PEEEA RE Sbjct: 37 IPLPNVKSTVLKKVIEFCKHHRSEPMTEIEKPLKSAAMAEVVQKWYADFV-NVEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIANDFSPEEEAQVRE 148 The following BLAST results are available for this feature:
BLAST of NO14G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G00110 ID=NO14G00110|Name=NO14G00110|organism=Nannochloropsis oceanica|type=gene|length=1973bpback to top protein sequence of NO14G00110.3 >NO14G00110.3-protein ID=NO14G00110.3-protein|Name=NO14G00110.3|organism=Nannochloropsis oceanica|type=polypeptide|length=140bpback to top protein sequence of NO14G00110.2 >NO14G00110.2-protein ID=NO14G00110.2-protein|Name=NO14G00110.2|organism=Nannochloropsis oceanica|type=polypeptide|length=192bpback to top protein sequence of NO14G00110.1 >NO14G00110.1-protein ID=NO14G00110.1-protein|Name=NO14G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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