NO14G00040, NO14G00040 (gene) Nannochloropsis oceanica

Overview
NameNO14G00040
Unique NameNO14G00040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1729
Alignment locationchr14:8753..10481 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:8753..10481 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL137nonsL137Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006181NSK006181Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00040.1NO14G00040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00040.1NO14G00040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00040 ID=NO14G00040|Name=NO14G00040|organism=Nannochloropsis oceanica|type=gene|length=1729bp
ATGGAGCAGCTTGAGGATAATCTCAGCCAGGCAAGGGACGCGGTTGCCTT
GCTCTTGTCCTCGTCCTGTTCCTCCTCGACCGCTGCGGCCAAGGACGCAA
ACCGTTTACTGCGGGAAGTAGAAAGGGCCGTGCAATACGCCCAACGAGAA
GCCATGGGGGAGCCCGAGGCACGCAAGACCATGATCCTGGGGAGGTTACA
GCGGGTTGAGCGGGCGGTAAGAGAATTGAAGGCGACAGTGCGGCAGgtaa
gtgagacagttgcgggtgggtgggtgagggaacgaaccttagggtaggga
gcggatgaaaggtttgataactcatgtctgtgaagatatgcgtgataatg
gcggaactatccaggttgctttccgggcccgtacgtatggagtgcatgag
ggggagaggaggcggaagggagtcagcacgagctacagcacaaacatgtg
tttcctcctcacactcttccgcaccttcctcacctcactcatagATCCTC
AAGGCCGCCGCGGAGGGCACATTTCAGCATTCGCCCGCCCCCAGCAGTGC
CGCCGAGGACAGAGACTTCCTCCTACACCATCACCACCCCAACGGCAGTC
CCAGAGACAGCCAGCGGCAGATGGAAGGCCTGGTCGACGTAGTGGGGGAG
TCGCGGGAGATGACGGCAAGCTTGGCCCGCACCCGAAAATTGATGCATCA
AGAAGTGAGGCGGATGGGTGGGGTAGTGGAGGTGATCGACGAGGACGGGA
AAGCCATCACGGCCACCCACCAAGCGCACACTGCCATAGCGGGAGCCTTG
GAGAGGGCTGACGCACTCTTGCGGCGGCTGAAGCGACAGGAGCAGATGGA
CCGGTGGTCAAAGCgtgcctcgttcgccatgttcttgctgactgtgacct
ttattgcttctagaagagtgtggctccccgatgtggtccggcattaccag
GCGGTCAGGACACGCGTGCTGCTGCCGGTCGCGGAGAAGGTTTGGGGGGG
CAGGGGGACGAGGAGGGGATGGGAGTGGGATTGGGCGTAGTAAAAAGTGA
GAAACAAAAGGAGGAGCAGCAGCTGCAGCAGCAGCAGCTAGGGAAGGTGG
TAGAAGTAGAGGATCCGCCGCCGGCGTCGCAGCAGCAGCACCTAGAGGAT
GAGCAGGAGCAGCAGCAGCAGCGGTTGGGAAGGGTGGTGCAGACGGGGGA
AAATAAGCGGGAAAAGGTGGAAAGTTATGAAAAAAGGCGGGAAACAACGC
CAAGAAAATCATCAGAGAAAGCTGCGGTGAAGGAGCAGGGGCAGGAGGAA
GTGCAGGCCGTACCTGCGCCGAGGCCGATGGTTGAAGACGTGATGGTTGA
GGATGGCGGGTTGAGCATAACAGAAAAGAAAGAAGGGGGCATGAGAACAA
GAGCAGAAATGCTCGAGGAGGTGCAAGCCCACGTTGCGGTTGTGGAGGCG
CACGGGCAGCAGGCAGTGGAAATAGAAGAAAAAGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGGGGAGGTGGGGGAAGAAGGAGAAGAGCAGGTGGCGC
ACGAGGAGGGAGAAAACAAAGAGTTGGACGATGCCGAGGATCAGAACAAG
GAAGAGACGGGATTTGTGTCAACCATGAAGCGATTCGAAGATAAGGGCAA
TGATTTGGCGAAGGAGGAGGCAGACCATAGGTACGCGACGGCGGCCGAGG
AGGAGGACGGACTTTATGAAGAGCTCTAA
back to top

protein sequence of NO14G00040.1

>NO14G00040.1-protein ID=NO14G00040.1-protein|Name=NO14G00040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MEQLEDNLSQARDAVALLLSSSCSSSTAAAKDANRLLREVERAVQYAQRE
AMGEPEARKTMILGRLQRVERAVRELKATVRQILKAAAEGTFQHSPAPSS
AAEDRDFLLHHHHPNGSPRDSQRQMEGLVDVVGESREMTASLARTRKLMH
QEVRRMGGVVEVIDEDGKAITATHQAHTAIAGALERADALLRRLKRQEQM
DRWSKRGQDTRAAAGRGEGLGGQGDEEGMGVGLGVVKSEKQKEEQQLQQQ
QLGKVVEVEDPPPASQQQHLEDEQEQQQQRLGRVVQTGENKREKVESYEK
RRETTPRKSSEKAAVKEQGQEEVQAVPAPRPMVEDVMVEDGGLSITEKKE
GGMRTRAEMLEEVQAHVAVVEAHGQQAVEIEEKEEEEEEEEEEGEVGEEG
EEQVAHEEGENKELDDAEDQNKEETGFVSTMKRFEDKGNDLAKEEADHRY
ATAAEEEDGLYEEL*
back to top
Synonyms
Publications