NO14G00040.1, NO14G00040.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G00040.1
Unique NameNO14G00040.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1395
Alignment locationchr14:8753..10481 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:8753..10481 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00040.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00040NO14G00040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G00040.1NO14G00040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G00040.1.cds1NO14G00040.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00040.1.cds2NO14G00040.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00040.1.cds3NO14G00040.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G00040.1 ID=NO14G00040.1|Name=NO14G00040.1|organism=Nannochloropsis oceanica|type=mRNA|length=1395bp
ATGGAGCAGCTTGAGGATAATCTCAGCCAGGCAAGGGACGCGGTTGCCTT
GCTCTTGTCCTCGTCCTGTTCCTCCTCGACCGCTGCGGCCAAGGACGCAA
ACCGTTTACTGCGGGAAGTAGAAAGGGCCGTGCAATACGCCCAACGAGAA
GCCATGGGGGAGCCCGAGGCACGCAAGACCATGATCCTGGGGAGGTTACA
GCGGGTTGAGCGGGCGGTAAGAGAATTGAAGGCGACAGTGCGGCAGATCC
TCAAGGCCGCCGCGGAGGGCACATTTCAGCATTCGCCCGCCCCCAGCAGT
GCCGCCGAGGACAGAGACTTCCTCCTACACCATCACCACCCCAACGGCAG
TCCCAGAGACAGCCAGCGGCAGATGGAAGGCCTGGTCGACGTAGTGGGGG
AGTCGCGGGAGATGACGGCAAGCTTGGCCCGCACCCGAAAATTGATGCAT
CAAGAAGTGAGGCGGATGGGTGGGGTAGTGGAGGTGATCGACGAGGACGG
GAAAGCCATCACGGCCACCCACCAAGCGCACACTGCCATAGCGGGAGCCT
TGGAGAGGGCTGACGCACTCTTGCGGCGGCTGAAGCGACAGGAGCAGATG
GACCGGTGGTCAAAGCGCGGTCAGGACACGCGTGCTGCTGCCGGTCGCGG
AGAAGGTTTGGGGGGGCAGGGGGACGAGGAGGGGATGGGAGTGGGATTGG
GCGTAGTAAAAAGTGAGAAACAAAAGGAGGAGCAGCAGCTGCAGCAGCAG
CAGCTAGGGAAGGTGGTAGAAGTAGAGGATCCGCCGCCGGCGTCGCAGCA
GCAGCACCTAGAGGATGAGCAGGAGCAGCAGCAGCAGCGGTTGGGAAGGG
TGGTGCAGACGGGGGAAAATAAGCGGGAAAAGGTGGAAAGTTATGAAAAA
AGGCGGGAAACAACGCCAAGAAAATCATCAGAGAAAGCTGCGGTGAAGGA
GCAGGGGCAGGAGGAAGTGCAGGCCGTACCTGCGCCGAGGCCGATGGTTG
AAGACGTGATGGTTGAGGATGGCGGGTTGAGCATAACAGAAAAGAAAGAA
GGGGGCATGAGAACAAGAGCAGAAATGCTCGAGGAGGTGCAAGCCCACGT
TGCGGTTGTGGAGGCGCACGGGCAGCAGGCAGTGGAAATAGAAGAAAAAG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGTGGGGGAAGAAGGA
GAAGAGCAGGTGGCGCACGAGGAGGGAGAAAACAAAGAGTTGGACGATGC
CGAGGATCAGAACAAGGAAGAGACGGGATTTGTGTCAACCATGAAGCGAT
TCGAAGATAAGGGCAATGATTTGGCGAAGGAGGAGGCAGACCATAGGTAC
GCGACGGCGGCCGAGGAGGAGGACGGACTTTATGAAGAGCTCTAA
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protein sequence of NO14G00040.1

>NO14G00040.1-protein ID=NO14G00040.1-protein|Name=NO14G00040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MEQLEDNLSQARDAVALLLSSSCSSSTAAAKDANRLLREVERAVQYAQRE
AMGEPEARKTMILGRLQRVERAVRELKATVRQILKAAAEGTFQHSPAPSS
AAEDRDFLLHHHHPNGSPRDSQRQMEGLVDVVGESREMTASLARTRKLMH
QEVRRMGGVVEVIDEDGKAITATHQAHTAIAGALERADALLRRLKRQEQM
DRWSKRGQDTRAAAGRGEGLGGQGDEEGMGVGLGVVKSEKQKEEQQLQQQ
QLGKVVEVEDPPPASQQQHLEDEQEQQQQRLGRVVQTGENKREKVESYEK
RRETTPRKSSEKAAVKEQGQEEVQAVPAPRPMVEDVMVEDGGLSITEKKE
GGMRTRAEMLEEVQAHVAVVEAHGQQAVEIEEKEEEEEEEEEEGEVGEEG
EEQVAHEEGENKELDDAEDQNKEETGFVSTMKRFEDKGNDLAKEEADHRY
ATAAEEEDGLYEEL*
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mRNA from alignment at chr14:8753..10481-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G00040.1 ID=NO14G00040.1|Name=NO14G00040.1|organism=Nannochloropsis oceanica|type=mRNA|length=1729bp|location=Sequence derived from alignment at chr14:8753..10481- (Nannochloropsis oceanica)
ATGGAGCAGCTTGAGGATAATCTCAGCCAGGCAAGGGACGCGGTTGCCTT
GCTCTTGTCCTCGTCCTGTTCCTCCTCGACCGCTGCGGCCAAGGACGCAA
ACCGTTTACTGCGGGAAGTAGAAAGGGCCGTGCAATACGCCCAACGAGAA
GCCATGGGGGAGCCCGAGGCACGCAAGACCATGATCCTGGGGAGGTTACA
GCGGGTTGAGCGGGCGGTAAGAGAATTGAAGGCGACAGTGCGGCAGGTAA
GTGAGACAGTTGCGGGTGGGTGGGTGAGGGAACGAACCTTAGGGTAGGGA
GCGGATGAAAGGTTTGATAACTCATGTCTGTGAAGATATGCGTGATAATG
GCGGAACTATCCAGGTTGCTTTCCGGGCCCGTACGTATGGAGTGCATGAG
GGGGAGAGGAGGCGGAAGGGAGTCAGCACGAGCTACAGCACAAACATGTG
TTTCCTCCTCACACTCTTCCGCACCTTCCTCACCTCACTCATAGATCCTC
AAGGCCGCCGCGGAGGGCACATTTCAGCATTCGCCCGCCCCCAGCAGTGC
CGCCGAGGACAGAGACTTCCTCCTACACCATCACCACCCCAACGGCAGTC
CCAGAGACAGCCAGCGGCAGATGGAAGGCCTGGTCGACGTAGTGGGGGAG
TCGCGGGAGATGACGGCAAGCTTGGCCCGCACCCGAAAATTGATGCATCA
AGAAGTGAGGCGGATGGGTGGGGTAGTGGAGGTGATCGACGAGGACGGGA
AAGCCATCACGGCCACCCACCAAGCGCACACTGCCATAGCGGGAGCCTTG
GAGAGGGCTGACGCACTCTTGCGGCGGCTGAAGCGACAGGAGCAGATGGA
CCGGTGGTCAAAGCGTGCCTCGTTCGCCATGTTCTTGCTGACTGTGACCT
TTATTGCTTCTAGAAGAGTGTGGCTCCCCGATGTGGTCCGGCATTACCAG
GCGGTCAGGACACGCGTGCTGCTGCCGGTCGCGGAGAAGGTTTGGGGGGG
CAGGGGGACGAGGAGGGGATGGGAGTGGGATTGGGCGTAGTAAAAAGTGA
GAAACAAAAGGAGGAGCAGCAGCTGCAGCAGCAGCAGCTAGGGAAGGTGG
TAGAAGTAGAGGATCCGCCGCCGGCGTCGCAGCAGCAGCACCTAGAGGAT
GAGCAGGAGCAGCAGCAGCAGCGGTTGGGAAGGGTGGTGCAGACGGGGGA
AAATAAGCGGGAAAAGGTGGAAAGTTATGAAAAAAGGCGGGAAACAACGC
CAAGAAAATCATCAGAGAAAGCTGCGGTGAAGGAGCAGGGGCAGGAGGAA
GTGCAGGCCGTACCTGCGCCGAGGCCGATGGTTGAAGACGTGATGGTTGA
GGATGGCGGGTTGAGCATAACAGAAAAGAAAGAAGGGGGCATGAGAACAA
GAGCAGAAATGCTCGAGGAGGTGCAAGCCCACGTTGCGGTTGTGGAGGCG
CACGGGCAGCAGGCAGTGGAAATAGAAGAAAAAGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGGGGAGGTGGGGGAAGAAGGAGAAGAGCAGGTGGCGC
ACGAGGAGGGAGAAAACAAAGAGTTGGACGATGCCGAGGATCAGAACAAG
GAAGAGACGGGATTTGTGTCAACCATGAAGCGATTCGAAGATAAGGGCAA
TGATTTGGCGAAGGAGGAGGCAGACCATAGGTACGCGACGGCGGCCGAGG
AGGAGGACGGACTTTATGAAGAGCTCTAA
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Coding sequence (CDS) from alignment at chr14:8753..10481-

>NO14G00040.1 ID=NO14G00040.1|Name=NO14G00040.1|organism=Nannochloropsis oceanica|type=CDS|length=1395bp|location=Sequence derived from alignment at chr14:8753..10481- (Nannochloropsis oceanica)
ATGGAGCAGCTTGAGGATAATCTCAGCCAGGCAAGGGACGCGGTTGCCTT
GCTCTTGTCCTCGTCCTGTTCCTCCTCGACCGCTGCGGCCAAGGACGCAA
ACCGTTTACTGCGGGAAGTAGAAAGGGCCGTGCAATACGCCCAACGAGAA
GCCATGGGGGAGCCCGAGGCACGCAAGACCATGATCCTGGGGAGGTTACA
GCGGGTTGAGCGGGCGGTAAGAGAATTGAAGGCGACAGTGCGGCAGATCC
TCAAGGCCGCCGCGGAGGGCACATTTCAGCATTCGCCCGCCCCCAGCAGT
GCCGCCGAGGACAGAGACTTCCTCCTACACCATCACCACCCCAACGGCAG
TCCCAGAGACAGCCAGCGGCAGATGGAAGGCCTGGTCGACGTAGTGGGGG
AGTCGCGGGAGATGACGGCAAGCTTGGCCCGCACCCGAAAATTGATGCAT
CAAGAAGTGAGGCGGATGGGTGGGGTAGTGGAGGTGATCGACGAGGACGG
GAAAGCCATCACGGCCACCCACCAAGCGCACACTGCCATAGCGGGAGCCT
TGGAGAGGGCTGACGCACTCTTGCGGCGGCTGAAGCGACAGGAGCAGATG
GACCGGTGGTCAAAGCGCGGTCAGGACACGCGTGCTGCTGCCGGTCGCGG
AGAAGGTTTGGGGGGGCAGGGGGACGAGGAGGGGATGGGAGTGGGATTGG
GCGTAGTAAAAAGTGAGAAACAAAAGGAGGAGCAGCAGCTGCAGCAGCAG
CAGCTAGGGAAGGTGGTAGAAGTAGAGGATCCGCCGCCGGCGTCGCAGCA
GCAGCACCTAGAGGATGAGCAGGAGCAGCAGCAGCAGCGGTTGGGAAGGG
TGGTGCAGACGGGGGAAAATAAGCGGGAAAAGGTGGAAAGTTATGAAAAA
AGGCGGGAAACAACGCCAAGAAAATCATCAGAGAAAGCTGCGGTGAAGGA
GCAGGGGCAGGAGGAAGTGCAGGCCGTACCTGCGCCGAGGCCGATGGTTG
AAGACGTGATGGTTGAGGATGGCGGGTTGAGCATAACAGAAAAGAAAGAA
GGGGGCATGAGAACAAGAGCAGAAATGCTCGAGGAGGTGCAAGCCCACGT
TGCGGTTGTGGAGGCGCACGGGCAGCAGGCAGTGGAAATAGAAGAAAAAG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGTGGGGGAAGAAGGA
GAAGAGCAGGTGGCGCACGAGGAGGGAGAAAACAAAGAGTTGGACGATGC
CGAGGATCAGAACAAGGAAGAGACGGGATTTGTGTCAACCATGAAGCGAT
TCGAAGATAAGGGCAATGATTTGGCGAAGGAGGAGGCAGACCATAGGTAC
GCGACGGCGGCCGAGGAGGAGGACGGACTTTATGAAGAGCTCTAA
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Synonyms
Publications