NO13G03460, NO13G03460 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03460 vs. NCBI_GenBank
Match: EWM20240.1 (hypothetical protein Naga_100380g2 [Nannochloropsis gaditana]) HSP 1 Score: 361.3 bits (926), Expect = 5.600e-96 Identity = 183/462 (39.61%), Postives = 275/462 (59.52%), Query Frame = 0
Query: 118 IKVFQYLLEANTTAVPSNIMATSSYGLIRSFIALHQLKPARLWTDWYYYNIVPLQGEPAYHLCRALREDGQSXXXXXXXXXXXXXXXXXAAISYIPAEHEICDYLLDYEKSILWSYLGDSRDSSYLLHGLTFSMRMLENPKLPEYIRDSVFSNLQYYVSNLDGQVEVLRSKDSLDEGWHYSSPTFIGDETLIHVVNYYISEDGIYHVSKGDHGRSRLLSAATDKDFEIVLSETFEDRVVRDGLHHDDAYILGLEDTR--AVVDVKCNNT-IFTLSASQEYSRSPGVISQVLGTLNLEERKIQVEAVLEGPYAGRNEKNWVFAGSLDKIVYKWHPSIELGAIDLSNDTSFHIHTSIPSPESFRGMRGSTNGVLYREQWWFVTHSHIYREGQMRKYLHYLVVLNQELSAIVRYSLPFSFEEGSDIEFCLGLKVEESGIVFGYSAKEKSTKIMRIHWPEMGRMFN 577
+K + L + T V +++ L++ FI +L ARL D P + EPAY+LC+A RE ++ +P E + DYLLDYEKSI+W Y+G D S HGL+ M +LENP LP + V++N+ Y +L G +LR++ + ++ W +S+PTF+ L+ VNY+ +EDG YHVS+ ++R+L +D+ +I SE F R+ G HH +AY+ GLEDTR + D K N++ I+TLSAS EYSRS ++Q+LG + + + ++ ++ GP+ R EKNWVF ++ +VY+W+P I +G ID + F I SI SP SF MRGSTNG+L+R +WWFVTH +R G+ R Y H +V+LN E+S ++RYSLPF+F +DIE+CLGLK + G+ FGYS ++KS+ ++ W E+ + F+
Sbjct: 87 LKFSKCLAQVLDTEVSNDMQDKDILPLVKCFIENGELGKARLLVDTTSDQSFP-RAEPAYYLCKAFREK-ENYALAYYYYLLASKMSTSKPAGRLPGEEAVHDYLLDYEKSIIWYYVGALSDRSTRRHGLSLCMNLLENPLLPSNLASIVYNNIPVYTQSLRGHRTLLRAEKNENDPWRFSTPTFLDSHVLLREVNYFAAEDGSYHVSQDSQVKTRVLVDGSDQYIKIQESEDFRKRITERGWHHPEAYVQGLEDTRFKSTFDYKANSSVIYTLSASMEYSRSANHMNQLLGVIEPDTWTLTIQDIIRGPFGDRTEKNWVFVNGIESLVYEWYPFIRIGHID-RDKGEFVIDRSIQSPLSFLNMRGSTNGILHRNEWWFVTHMVKHRSGRRRIYTHRIVILNFEMSQVLRYSLPFTFNSETDIEYCLGLKADNEGLTFGYSVRDKSSWTLQCSWGEIEQYFD 545
BLAST of NO13G03460 vs. NCBI_GenBank
Match: EWM20239.1 (hypothetical protein Naga_100470g1 [Nannochloropsis gaditana]) HSP 1 Score: 169.5 bits (428), Expect = 3.100e-38 Identity = 91/269 (33.83%), Postives = 144/269 (53.53%), Query Frame = 0
Query: 118 IKVFQYLLEANTTAVPSNIMATSSYGLIRSFIALHQLKPARLWTDWYYYNIVPLQGEPAYHLCRALREDGQSXXXXXXXXXXXXXXXXXAAISYIPAEHEICDYLLDYEKSILWSYLGDSRDSSYLLHGLTFSMRMLENPKLPEYIRDSVFSNLQYYVSNLDGQVEVLRSKDSLDEGWHYSSPTFIGDETLIHVVNYYISEDGIYHVSKGDHGRSRLLSAATDKDFEIVLSETFEDRVVRDGLHHDDAYILGLEDTR--AVVDVKCNNT 385
+K + + T V +++ +++ FI +L+ ARL D P + EPAY+LC+A RE ++ +P E + DYLL+YEKSI+W Y+G D S HGL+ M +LENP LP + V++N+ Y +L G +LR++ + ++ W +S+PTF+ L+ VNY+ +EDG YHVS+ ++R+L +D+ +I SE F R+ G HH +AY+ GLEDTR + D K N++
Sbjct: 87 LKFSKCFAQVLNTEVSNDMQDKDILPMVKCFIENGELEKARLLVDTTSDQSFP-RAEPAYYLCKAFREK-ENYALAYYYYLLASKMSTSKPAGRLPGEEAVHDYLLEYEKSIIWYYVGALSDRSTRRHGLSLCMNLLENPLLPSNLASIVYNNIPVYTQSLRGHRTLLRAEKNENDPWRFSTPTFLDSHVLLREVNYFAAEDGSYHVSQDSQVKTRVLVDGSDQYIKIQESEDFRKRITERGWHHPEAYVQGLEDTRFKSTFDCKANSS 353
BLAST of NO13G03460 vs. NCBI_GenBank
Match: EWM20222.1 (hypothetical protein Naga_100716g1 [Nannochloropsis gaditana]) HSP 1 Score: 167.9 bits (424), Expect = 9.000e-38 Identity = 90/257 (35.02%), Postives = 139/257 (54.09%), Query Frame = 0
Query: 130 TAVPSNIMATSSYGLIRSFIALHQLKPARLWTDWYYYNIVPLQGEPAYHLCRALREDGQSXXXXXXXXXXXXXXXXXAAISYIPAEHEICDYLLDYEKSILWSYLGDSRDSSYLLHGLTFSMRMLENPKLPEYIRDSVFSNLQYYVSNLDGQVEVLRSKDSLDEGWHYSSPTFIGDETLIHVVNYYISEDGIYHVSKGDHGRSRLLSAATDKDFEIVLSETFEDRVVRDGLHHDDAYILGLEDTR--AVVDVKCNNT 385
T V +++ L++ FI +L ARL D P + EPAY+LC+A RE ++ +P E + DYLLDYEKSI+W Y+G D S HGL+ + +LENP LP + V++N+ Y +L G +LR++ + ++ W +S+PTF+ L+ VNY+ +EDG YH+S+ ++R+L +D+ +I SE F R+ G HH +AY+ GLEDTR + D K N++
Sbjct: 100 TEVSNDMQDKDILPLVKCFIENGELGKARLLVDTTSGQSFP-RAEPAYYLCKAFREK-ENYALAYYYYLLASKMSTSKPAGRLPGEEAVHDYLLDYEKSIIWYYVGALSDRSTRRHGLSLCINLLENPLLPSNLASIVYNNIPVYTQSLRGHRTLLRAEKNENDPWRFSTPTFLDSHVLLREVNYFAAEDGSYHISQDSQVKTRVLVDGSDQYIKIQESEDFRKRIAERGWHHPEAYVQGLEDTRFKSTFDCKANSS 354
BLAST of NO13G03460 vs. NCBI_GenBank
Match: EWM20170.1 (hypothetical protein Naga_101281g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 166.8 bits (421), Expect = 2.000e-37 Identity = 74/156 (47.44%), Postives = 106/156 (67.95%), Query Frame = 0
Query: 421 LEGPYAGRNEKNWVFAGSLDKIVYKWHPSIELGAIDLSNDTSFHIHTSIPSPESFRGMRGSTNGVLYREQWWFVTHSHIYREGQMRKYLHYLVVLNQELSAIVRYSLPFSFEEGSDIEFCLGLKVEESGIVFGYSAKEKSTKIMRIHWPEMGRMFN 577
+ GP+ R KNWVF ++ +VY+W+P I +G ID + F I SI SP SF MRGSTNG+L+R +WWFVTH +R G+ R Y + +V+LN E+S I+RYSLPF+F +DIE+CLGLK + G+ FGYS ++KS+ ++ W E+ + F+
Sbjct: 1 IRGPFGDRTGKNWVFVNGIESLVYEWYPFIRIGHID-RDKGEFVIDRSIQSPLSFLNMRGSTNGILHRNEWWFVTHMVKHRSGRRRIYTNRMVILNFEMSQILRYSLPFTFNSETDIEYCLGLKADNEGLTFGYSVRDKSSWTLQCSWREIEQYFD 155
BLAST of NO13G03460 vs. NCBI_GenBank
Match: YP_009174077.1 (putative glycosyl transferase [Yellowstone lake mimivirus] >BAT21964.1 putative glycosyl transferase [Yellowstone lake mimivirus]) HSP 1 Score: 112.5 bits (280), Expect = 4.500e-21 Identity = 110/374 (29.41%), Postives = 171/374 (45.72%), Query Frame = 0
Query: 211 YIPAEHEICDYLLDYEKSILWSYLGDSRDSSYLLHGLTFSMRMLENPKLPEYIRDSVFSNLQYYVSNLDG-QVEVLRSKDSLDEGWH----YSSPTFI---GDETLIHV--VNYYISEDGIYHVSKGDHGRSRLLSAATDKDFEIVLSETFEDRVVRDGLHHDDAYILGLEDTR----AVVDVKCNNTIFTLSASQEY----SRSPGVISQVLGTLNLEERKIQVEAVLEGPYAGRN-EKNWVFA--GSLDKIVYKWHPSIELGAIDLSNDTSFHIHTSIPSPESFRGMRGSTNGVLYREQWWFVTHSHIYREGQMRKYLHYLVVLNQELSAIVRYSLPFSFEEGSDIEFCLGLKVEESGIVFGYSAKEKSTKI 564
Y+ + + Y + YE +I Y+G + ++ L+ ++ N I ++V SN ++Y L+ ++ L S L G H YSS + I ++ +++V VNY I +G YH + H + D DF IV + F V D +G+ED R ++ +V NN + Y I V G +L+ +I + + N EKNWVF + I+YKWHP ++L +D D + I P F RGST G Y ++ WFV H Y E R Y H LVVL+ + + RYS PF F +G IE+C+GL VEE ++ YS +++T++
Sbjct: 304 YLFLQASVYSYKIYYEYTICACYVGITNINNELM--------IVLNECKDTNIINNVLSNTKFYKQILEPLRMIDLTSIKHLLIGTHVMKMYSSSSSIIKVDNQYVMNVRMVNYLIDNNGNYHDCE-KHIITINKYVVLDSDFTIVKEQQFNQDYV-------DRRYIGIEDLRIFQNSLDNVLDNNGLDNEKREINYIGTGYHQNNKIGIVYGKYDLDSEEITDINEINTAFTTSNCEKNWVFTEYNNETHIIYKWHP-LQLCKLD-KKDNLIRLVKEIEMPAFFSLSRGSTCGSKYEDEIWFVVHIVSYEE--PRHYYHCLVVLDNNMK-LKRYSAPFKF-KGETIEYCIGLLVEEDRVIMTYSCWDRTTQL 655 The following BLAST results are available for this feature:
BLAST of NO13G03460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03460 ID=NO13G03460|Name=NO13G03460|organism=Nannochloropsis oceanica|type=gene|length=6078bpback to top protein sequence of NO13G03460.1 >NO13G03460.1-protein ID=NO13G03460.1-protein|Name=NO13G03460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=577bpback to top protein sequence of NO13G03460.2 >NO13G03460.2-protein ID=NO13G03460.2-protein|Name=NO13G03460.2|organism=Nannochloropsis oceanica|type=polypeptide|length=577bpback to top protein sequence of NO13G03460.3 >NO13G03460.3-protein ID=NO13G03460.3-protein|Name=NO13G03460.3|organism=Nannochloropsis oceanica|type=polypeptide|length=577bpback to top protein sequence of NO13G03460.4 >NO13G03460.4-protein ID=NO13G03460.4-protein|Name=NO13G03460.4|organism=Nannochloropsis oceanica|type=polypeptide|length=577bpback to top protein sequence of NO13G03460.5 >NO13G03460.5-protein ID=NO13G03460.5-protein|Name=NO13G03460.5|organism=Nannochloropsis oceanica|type=polypeptide|length=577bpback to top protein sequence of NO13G03460.6 >NO13G03460.6-protein ID=NO13G03460.6-protein|Name=NO13G03460.6|organism=Nannochloropsis oceanica|type=polypeptide|length=577bpback to top Synonyms
Publications
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