NO13G03460.6, NO13G03460.6 (mRNA) Nannochloropsis oceanica

Overview
NameNO13G03460.6
Unique NameNO13G03460.6
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5994
Alignment locationchr13:1035604..1041681 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:1035604..1041681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO13G03460.6 vs.
Match: EWM20240.1 (hypothetical protein Naga_100380g2 [Nannochloropsis gaditana])

HSP 1 Score: 384.0 bits (985), Expect = 8.000e-103
Identity = 193/462 (41.77%), Postives = 287/462 (62.12%), Query Frame = 0
Query:  118 IKVFQYLLEANTTAVPSNIMATSSYGLIRSFIALHQLKPARLWTDWYYYNIVPLQGEPAYHLCRALREDGQSAAAFYYYLMAEKTLSSSAAISYIPAEHEICDYLLDYEKSILWSYLGDSRDSSYLLHGLTFSMRMLENPKLPEYIRDSVFSNLQYYVSNLDGQVEVLRSKDSLDEGWHYSSPTFIGDETLIHVVNYYISEDGIYHVSKGDHGRSRLLSAATDKDFEIVLSETFEDRVVRDGLHHDDAYILGLEDTR--AVVDVKCNNT-IFTLSASQEYSRSPGVISQVLGTLNLEERKIQVEAVLEGPYAGRNEKNWVFAGSLDKIVYKWHPSIELGAIDLSNDTSFHIHTSIPSPESFRGMRGSTNGVLYREQWWFVTHSHIYREGQMRKYLHYLVVLNQELSAIVRYSLPFSFEEGSDIEFCLGLKVEESGIVFGYSAKEKSTKIMRIHWPEMGRMFN 577
            +K  + L +   T V +++       L++ FI   +L  ARL  D       P + EPAY+LC+A RE    A A+YYYL+A K +S+S     +P E  + DYLLDYEKSI+W Y+G   D S   HGL+  M +LENP LP  +   V++N+  Y  +L G   +LR++ + ++ W +S+PTF+    L+  VNY+ +EDG YHVS+    ++R+L   +D+  +I  SE F  R+   G HH +AY+ GLEDTR  +  D K N++ I+TLSAS EYSRS   ++Q+LG +  +   + ++ ++ GP+  R EKNWVF   ++ +VY+W+P I +G ID  +   F I  SI SP SF  MRGSTNG+L+R +WWFVTH   +R G+ R Y H +V+LN E+S ++RYSLPF+F   +DIE+CLGLK +  G+ FGYS ++KS+  ++  W E+ + F+
Sbjct:   87 LKFSKCLAQVLDTEVSNDMQDKDILPLVKCFIENGELGKARLLVDTTSDQSFP-RAEPAYYLCKAFREKENYALAYYYYLLASK-MSTSKPAGRLPGEEAVHDYLLDYEKSIIWYYVGALSDRSTRRHGLSLCMNLLENPLLPSNLASIVYNNIPVYTQSLRGHRTLLRAEKNENDPWRFSTPTFLDSHVLLREVNYFAAEDGSYHVSQDSQVKTRVLVDGSDQYIKIQESEDFRKRITERGWHHPEAYVQGLEDTRFKSTFDYKANSSVIYTLSASMEYSRSANHMNQLLGVIEPDTWTLTIQDIIRGPFGDRTEKNWVFVNGIESLVYEWYPFIRIGHID-RDKGEFVIDRSIQSPLSFLNMRGSTNGILHRNEWWFVTHMVKHRSGRRRIYTHRIVILNFEMSQVLRYSLPFTFNSETDIEYCLGLKADNEGLTFGYSVRDKSSWTLQCSWGEIEQYFD 545          
The following BLAST results are available for this feature:
BLAST of NO13G03460.6 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM20240.18.000e-10341.77hypothetical protein Naga_100380g2 [Nannochloropsi... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G03460NO13G03460Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO13G03460.6NO13G03460.6-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO13G03460.6.cds1NO13G03460.6.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G03460.6.cds2NO13G03460.6.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO13G03460.6 ID=NO13G03460.6|Name=NO13G03460.6|organism=Nannochloropsis oceanica|type=mRNA|length=5994bp
TTCATTATGAAGGGTTGAAATCCTCGGGAACATGATTCTGTCAAGATAGA
TGTCTGACTGGTGGGTATGAGTGGGCCGAGATGTTACTTGAGTTAGCCTA
GATGTTACTGACACAGATACCCCTTCCTCCTATCCCCTTTCCTTCGCAAT
TTATTCCTTAGACAGAAAGTGGAAATACCTTATATATCGTTACCGCAATG
AAATGTCCTCGCCTGCTACTACAAGATGGAAAATAGGCTGATGAAATAAA
TTATAGTCTGAAATGCGAGCACCATCATCCAAGACACACTCCTCTTTCAA
GAAAGAGAGCCACACAAAGATTTATTTAATCTTTTGGATCATTCTGCTGG
CAATCGTAGGCTCGTCTGTGTACCATATATTGCTATTTGGACAGGTCTCA
TCGGTTACTGGCATTGGAAATGCTAGCCAACTTGTGGGCCTCGGCCAGGG
CAAGTGGAAGAGGAGTAATCCGTGTCAAGGGAGAGCTTGTTTGTCCGACC
CCTGTCTTCCTGACGACTACACTGTTTGGGAAGAATGGAAGGTTTGCAAG
GAGAGACAGGTGTATACACTAAATTGGATGACAAAAGAAATTCACATCCA
AAATCGTCAAATGGGCATATCAGCATGTGAAATCAGATCTCCAGACATCC
TGAGAAGAGCAAACCATGCCAAAGTAATCTCGAGGGGCATTGACACTCAT
CAAAACGTCGTAAAAGTAACCACACCTTTCGAAGAATTCATTATTGAAAA
CCGCCATAACTTGCCTTGGTCGATGGATTCAAATTTCACAGCTGTCTTGG
TAGAATTTCGTGCCTATAGGCGGCCATTGCTATTTTCTATCAAGAATGCT
TTGAATAACCTTCCAGTCTCCTGCCGAGTTCAGATTGTTGGCGGGTGTCC
CATCTTATCCTTGGCAAAAAAAATATTTCCTATCGAAATTGCAGCAGGAA
AAATCATCTTGACACACGCAGGCCGGGAAAAGATGAACCAGGTATGAATG
CTTGATGGTGCCAGTTCCTACTCCTTTCTTCTTTAAAAATGGAATGCTTT
TTTTAGATCGCCATGCTCATCCAAATGGTTCCTACATCCGTTCACACATC
TTTCTCCGATGCACTTAAAGGTTGCCATTAGCGAGCTCCTGACAGACCCA
ACTTTTTATGAGACATTACTGGGCCAGACCTGGTTATTTTTTCAGGTTAG
TGGGTTATGGCTGATGTCAGAGTATCTGATATCTTCCAAACTTAAGATTT
GGAAAGACTACAAAGTACGTTGATGCCTCGATCGTAATTTATTTCGTACT
CATAACTGATCGTCCTTTCCATCTTCACTTATATAAAACGAAAAACGAAA
TGGCTACCAAAAGTATGATTCTGTGATTTGTTCCCAGCAACGATGGCGTT
TAAGAGAATTCCTTGACAAGAATTATGAGCGCGGCTGGTGGGGTGCGCCT
TGGCGGTAAGAATAAGAATGATATATAATCACATGATATTGATATATATG
CGATTGACCCCCTCATTTATAAATATACATTGCACCATTGCTATGTCATT
CACGCGGCCGCCTTTCAGCAACTCATCAATTGGAGGAAATGGAGGATTCT
CCTTGCGTAAGAAGGAGTTTATCTCGACAATTCTGTCAAGGTATGCCGTA
AATATCGAGGGTCTCCTCACGCCTTTATTATTCTTTGTTTTGACTTGTTT
CTTTCATTATCCTGTCGTATATTCACCCGGCACTATCACCTTGATAAACA
GATACCCATGGAGTGGCGACATTGAAGATTTGTACTTTTCTATGAAAGCT
TCAGAGATCTATCATGAGCTTCCGGATAATTTGAAGCCCGCATCTCAGAG
AGAAAATATGAAATTTTCTTCAGAAATGATGTTTTCGGATCGTCCTTTCG
GTGTTCACAAGTTCTGGGGGTTTCATTCCCCTGATGAACCGAGAATGATA
CAAATAATGAAACAATGTCCAGAAATGATAGGTATCTTGCCGTTGCGCGT
GGTGAGTGGGGACAGAGCGTGGGAAAAATTGATCTGCTCACTAAATATCA
CAAGAGATATTATCGAAAATGCCACATCAGGAGGCTCATTTGATTATGTG
AAATTTTGTCATTTTGAGAAGAATGCCAATTTTGACAATTAATCAGAAAT
TGGATTGAAGAAAGAAGCTAGGGTTCAACTTTTGCGATATAATAAGACAC
TATAAGTTATAAATGCATAGTCATGAACCAAAAATGATCATGTTAGTGTA
AAAGTATTAATTGATTTTTGTCTGTCCGTCGCACACTTAAAAACGATGGT
TTTCCGCGTTCTTCTCTTCCCACAAACCACCAAAGCACATGCACGCTTGG
CAACACACATGGTGCACACACACATACAATGTACAAAATTCTATGCAGTC
TTTGTGACGTCGTCCCGTGGTTTGTGTGGTTTTAAGCTTCCCGTGCCTCA
ATTTGGAGTGTTCCGCGGCCCGCGGATCCACAAATCATCGTTTCTACTCC
AATTGATGATGACGCATTCAAAATATGGGCATTGGCCATGGGCCTTGCAC
CCTTTTGCCAATTTGTGTAGCTTAGCATGCATGTGCGTTAGTGGTTTGTG
GGAAAAGAAGAACGCGGAAAAACATCGTTTTTAAGTGTGCGACGGACAGA
CAAAAATCGATTAATACTTTAGATCAGTCGTACTGGTCATTTTTGCAAAA
CAGTCGTCAACATTTGGACCTCGCTGCTTTTGTGTTATTTTTTTGGGATT
CAGGGCCTGGTTTCCGAATTCTAGGAATCATACATCAGGCAAGACGGGAC
AAAAAATGGAGCATGAAATTCGGTTTTACAGAGTTTATTATTCGTAGCAT
GCATGTAGTCTGTAAATCAACTTGCCATCTCAACTTGCCATCATCTCTAT
GATTATCTCTATGATAATCTTCTTGGGCAGGGACAGGTACAAGGATTTCA
GGGTTATTCTAGTGTGCATTCGGAATTTTTCTACTTATAGACAAGATGGA
CTTCATTCACTCTACATCACGCAAATATTCGATGGACAGGCACTACATAC
ACAAGCGTTTAGGTTTGAAGTACCGGAGTCTGAAGCGGTACATGGGATGG
GGAGCGTCGATTATAGGATTCATATCAGTTGTGTGGGTCTACACGAATGT
CGAAGTATGGAAGCGAGAGGCCCCCAAAAAAGACGGCCAAGATGTCCATC
TCACTGGCCCCCTCTCTTCTATCCAGCACGCCTTTCAGCGTTTGCCAGGG
CCCATTTCCTCCTACATTCATTTTCGTCGAGCAGATCCTGATACTATTCA
TACACTTGGGCAGCGGGCGCTTACGCACGGTCATTACCATGACGCCATTA
AAGTATTTCAGTATTTGCTCGAGGCTAATACTACGGCAGTACCATCTAAC
ATCATGGCGACAAGTAGTTATGGCCTGATTCGCAGCTTCATCGCCTTGCA
TCAGCTAAAGCCAGCCAGATTGTGGACGGATTGGTACTACTATAACATTG
TGCCTTTACAGGGAGAGCCGGCATATCATCTATGTCGAGCACTACGAGAG
GATGGCCAAAGTGCTGCAGCGTTCTACTATTACCTAATGGCTGAAAAGAC
ACTGTCAAGTTCAGCCGCCATTTCGTATATTCCTGCGGAGCATGAAATAT
GCGATTATCTGCTGGATTATGAAAAATCCATCCTCTGGTCATATCTGGGC
GACAGTCGAGACTCGTCTTATTTGCTTCATGGATTAACCTTTTCGATGCG
CATGCTCGAGAATCCAAAATTACCTGAATACATCCGAGACTCTGTCTTCA
GCAACCTCCAGTATTATGTCTCCAACCTAGATGGACAGGTCGAAGTTCTC
CGCTCAAAAGACTCACTGGACGAAGGTTGGCATTATTCATCTCCAACATT
CATCGGCGATGAAACGCTAATCCACGTCGTCAACTATTACATTTCTGAGG
ATGGTATTTACCACGTGTCCAAGGGTGACCACGGGAGATCACGGCTGCTT
TCTGCTGCCACGGATAAAGACTTTGAAATCGTTCTTTCCGAGACATTCGA
AGACCGTGTCGTCCGGGACGGACTACATCACGACGATGCCTACATATTAG
GACTGGAGGATACACGTGCTGTTGTGGATGTTAAGTGTAACAATACTATT
TTTACTTTATCGGCTTCGCAAGAATATTCACGAAGCCCTGGGGTCATTAG
TCAAGTCCTTGGCACATTAAACTTGGAAGAGCGCAAAATACAAGTCGAGG
CCGTGCTGGAGGGACCGTACGCTGGTCGTAACGAAAAAAATTGGGTTTTT
GCTGGCAGCCTTGATAAAATCGTTTATAAATGGCACCCATCTATCGAATT
GGGAGCCATCGACCTCTCCAATGATACAAGTTTCCATATTCACACATCTA
TCCCTTCGCCTGAATCTTTCAGGGGCATGCGCGGATCCACCAATGGAGTA
TTATACCGGGAGCAATGGTGGTTCGTAACGCATTCCCATATTTACCGGGA
GGGCCAGATGCGCAAGTATCTTCATTATCTCGTAGTACTAAATCAAGAGT
TGTCGGCCATCGTTCGATACTCGCTACCTTTTTCTTTCGAGGAGGGTTCC
GACATCGAATTTTGCTTGGGTTTGAAAGTTGAGGAGTCCGGTATTGTCTT
CGGATACAGCGCCAAGGAGAAATCGACAAAGATAATGAGGATTCACTGGC
CGGAAATGGGTCGCATGTTCAATTAGATGCTTTACCAAATCCAATATACG
GAATATTGTAGATATGTATCCTCCCAAAAAAAGAAGAATCGGGAAAAAAA
TGACTTTCTAAAAACAAATTGAGGGTGATATTTTCAAGCGCCTTAACTAT
TCTGCCCTCTACTGTTATCAACTCATCGCCGAGGAGATATGTTGGGCCTG
CAAAGCTGAACTGGAAGGCGTTCTTAGATTCTCGAGATGCATGCTGTATG
TCCATATCTCTCTTCCATATCTAACCCTAACAGATGTGCAACGCGTTAGA
TAGGGAAGGCTTGGAGGTGGTTCTGGCCGATAAGCGCGCACTGGCTGACG
TTTTGGAGCAGCCGCGACCTTTTTGCCTGCGCGAGCAGTTGCATAACTAT
CTGGATCCTGGAAGTGTATGGAGAGTTTGCGCAGGAGATGAGCAGCAGCT
TTAGTGTGGGGCATGCCGGAAGCTAGGCGGTCATGCCGACCCTGATACAG
TACAGCATTACAAGACTAACCTTGTTCCAGCCGCTGGATTTTCCATCGCT
CCCGCACAAGGCACGACGAAGAGTATGACACTGTGGTGGACGGGCCAGAC
CTAGACATGAGAGACCGTGGCTAGGACGACCCCTACACTACCGCGCCAAA
TTAAAATTGTTTCCAAGATAATTTGGACGACGAACTCATGAATATCAACG
TTCCTTCTTCTTCCTTGTCTTCCTCGCCTCCTCAATCTTCGGCGTGAGTA
TTTTTTGAGGAGGTCCCTGCTTCTTTGTGGACACAACAAGCATTGAGTTC
ACCTTCCTATTTCCCTATTGCGTCCACTGGTGCTGTCACTTTGTCTTCTC
GTTCCTCGTTGGCTCCTCTTCCTCAGGCTCGTGTGGCTCGTTCTTCCCTA
TCTCGGATGCGCCCAACTCCTCCGGTGACTACTGAAATGGAATCTCGCTC
CATCTTCGCGACCCCCAACTTCGTCCTTTGCTGCCCCTCGTGTGACTTCA
TCAACAAGCTTAAGTTTCGCTTTTCCTCGTCCTACATCGTCTTCTCTTGA
TGACCATGCATCACGCAAAGCTGCAATTACCTCGGCTTTGACAGTGTTTG
TGAGAGAAGCGCAGAAAGGTATGACGCCATCCCTCTCCAAACAAATTTAA
AAAACAAGGGTTTCCAGCGTTCTTCTCCTTCCACAAATCACCAACGCATA
TGCATGCTACGCAATACACATGAGGCAAAATACAATTTACAAGACGCTAT
GCAGTCTTTTGTGATGTCGTCCCGAGGTTTGTGTGGTTTTGAGC
back to top

protein sequence of NO13G03460.6

>NO13G03460.6-protein ID=NO13G03460.6-protein|Name=NO13G03460.6|organism=Nannochloropsis oceanica|type=polypeptide|length=577bp
MDFIHSTSRKYSMDRHYIHKRLGLKYRSLKRYMGWGASIIGFISVVWVYT
NVEVWKREAPKKDGQDVHLTGPLSSIQHAFQRLPGPISSYIHFRRADPDT
IHTLGQRALTHGHYHDAIKVFQYLLEANTTAVPSNIMATSSYGLIRSFIA
LHQLKPARLWTDWYYYNIVPLQGEPAYHLCRALREDGQSAAAFYYYLMAE
KTLSSSAAISYIPAEHEICDYLLDYEKSILWSYLGDSRDSSYLLHGLTFS
MRMLENPKLPEYIRDSVFSNLQYYVSNLDGQVEVLRSKDSLDEGWHYSSP
TFIGDETLIHVVNYYISEDGIYHVSKGDHGRSRLLSAATDKDFEIVLSET
FEDRVVRDGLHHDDAYILGLEDTRAVVDVKCNNTIFTLSASQEYSRSPGV
ISQVLGTLNLEERKIQVEAVLEGPYAGRNEKNWVFAGSLDKIVYKWHPSI
ELGAIDLSNDTSFHIHTSIPSPESFRGMRGSTNGVLYREQWWFVTHSHIY
REGQMRKYLHYLVVLNQELSAIVRYSLPFSFEEGSDIEFCLGLKVEESGI
VFGYSAKEKSTKIMRIHWPEMGRMFN*
back to top

mRNA from alignment at chr13:1035604..1041681+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO13G03460.6 ID=NO13G03460.6|Name=NO13G03460.6|organism=Nannochloropsis oceanica|type=mRNA|length=6078bp|location=Sequence derived from alignment at chr13:1035604..1041681+ (Nannochloropsis oceanica)
TTCATTATGAAGGGTTGAAATCCTCGGGAACATGATTCTGTCAAGATAGA TGTCTGACTGGTGGGTATGAGTGGGCCGAGATGTTACTTGAGTTAGCCTA GATGTTACTGACACAGATACCCCTTCCTCCTATCCCCTTTCCTTCGCAAT TTATTCCTTAGACAGAAAGTGGAAATACCTTATATATCGTTACCGCAATG AAATGTCCTCGCCTGCTACTACAAGATGGAAAATAGGCTGATGAAATAAA TTATAGTCTGAAATGCGAGCACCATCATCCAAGACACACTCCTCTTTCAA GAAAGAGAGCCACACAAAGATTTATTTAATCTTTTGGATCATTCTGCTGG CAATCGTAGGCTCGTCTGTGTACCATATATTGCTATTTGGACAGGTCTCA TCGGTTACTGGCATTGGAAATGCTAGCCAACTTGTGGGCCTCGGCCAGGG CAAGTGGAAGAGGAGTAATCCGTGTCAAGGGAGAGCTTGTTTGTCCGACC CCTGTCTTCCTGACGACTACACTGTTTGGGAAGAATGGAAGGTTTGCAAG GAGAGACAGGTGTATACACTAAATTGGATGACAAAAGAAATTCACATCCA AAATCGTCAAATGGGCATATCAGCATGTGAAATCAGATCTCCAGACATCC TGAGAAGAGCAAACCATGCCAAAGTAATCTCGAGGGGCATTGACACTCAT CAAAACGTCGTAAAAGTAACCACACCTTTCGAAGAATTCATTATTGAAAA CCGCCATAACTTGCCTTGGTCGATGGATTCAAATTTCACAGCTGTCTTGG TAGAATTTCGTGCCTATAGGCGGCCATTGCTATTTTCTATCAAGAATGCT TTGAATAACCTTCCAGTCTCCTGCCGAGTTCAGATTGTTGGCGGGTGTCC CATCTTATCCTTGGCAAAAAAAATATTTCCTATCGAAATTGCAGCAGGAA AAATCATCTTGACACACGCAGGCCGGGAAAAGATGAACCAGGTATGAATG CTTGATGGTGCCAGTTCCTACTCCTTTCTTCTTTAAAAATGGAATGCTTT TTTTAGATCGCCATGCTCATCCAAATGGTTCCTACATCCGTTCACACATC TTTCTCCGATGCACTTAAAGGTTGCCATTAGCGAGCTCCTGACAGACCCA ACTTTTTATGAGACATTACTGGGCCAGACCTGGTTATTTTTTCAGGTTAG TGGGTTATGGCTGATGTCAGAGTATCTGATATCTTCCAAACTTAAGATTT GGAAAGACTACAAAGTACGTTGATGCCTCGATCGTAATTTATTTCGTACT CATAACTGATCGTCCTTTCCATCTTCACTTATATAAAACGAAAAACGAAA TGGCTACCAAAAGTATGATTCTGTGATTTGTTCCCAGCAACGATGGCGTT TAAGAGAATTCCTTGACAAGAATTATGAGCGCGGCTGGTGGGGTGCGCCT TGGCGGTAAGAATAAGAATGATATATAATCACATGATATTGATATATATG CGATTGACCCCCTCATTTATAAATATACATTGCACCATTGCTATGTCATT CACGCGGCCGCCTTTCAGCAACTCATCAATTGGAGGAAATGGAGGATTCT CCTTGCGTAAGAAGGAGTTTATCTCGACAATTCTGTCAAGGTATGCCGTA AATATCGAGGGTCTCCTCACGCCTTTATTATTCTTTGTTTTGACTTGTTT CTTTCATTATCCTGTCGTATATTCACCCGGCACTATCACCTTGATAAACA GATACCCATGGAGTGGCGACATTGAAGATTTGTACTTTTCTATGAAAGCT TCAGAGATCTATCATGAGCTTCCGGATAATTTGAAGCCCGCATCTCAGAG AGAAAATATGAAATTTTCTTCAGAAATGATGTTTTCGGATCGTCCTTTCG GTGTTCACAAGTTCTGGGGGTTTCATTCCCCTGATGAACCGAGAATGATA CAAATAATGAAACAATGTCCAGAAATGATAGGTATCTTGCCGTTGCGCGT GGTGAGTGGGGACAGAGCGTGGGAAAAATTGATCTGCTCACTAAATATCA CAAGAGATATTATCGAAAATGCCACATCAGGAGGCTCATTTGATTATGTG AAATTTTGTCATTTTGAGAAGAATGCCAATTTTGACAATTAATCAGAAAT TGGATTGAAGAAAGAAGCTAGGGTTCAACTTTTGCGATATAATAAGACAC TATAAGTTATAAATGCATAGTCATGAACCAAAAATGATCATGTTAGTGTA AAAGTATTAATTGATTTTTGTCTGTCCGTCGCACACTTAAAAACGATGGT TTTCCGCGTTCTTCTCTTCCCACAAACCACCAAAGCACATGCACGCTTGG CAACACACATGGTGCACACACACATACAATGTACAAAATTCTATGCAGTC TTTGTGACGTCGTCCCGTGGTTTGTGTGGTTTTAAGCTTCCCGTGCCTCA ATTTGGAGTGTTCCGCGGCCCGCGGATCCACAAATCATCGTTTCTACTCC AATTGATGATGACGCATTCAAAATATGGGCATTGGCCATGGGCCTTGCAC CCTTTTGCCAATTTGTGTAGCTTAGCATGCATGTGCGTTAGTGGTTTGTG GGAAAAGAAGAACGCGGAAAAACATCGTTTTTAAGTGTGCGACGGACAGA CAAAAATCGATTAATACTTTAGATCAGTCGTACTGGTCATTTTTGCAAAA CAGTCGTCAACATTTGGACCTCGCTGCTTTTGTGTTATTTTTTTGGGATT CAGGGCCTGGTTTCCGAATTCTAGGAATCATACATCAGGCAAGACGGGAC AAAAAATGGAGCATGAAATTCGGTTTTACAGAGTTTATTATTCGTAGCAT GCATGTAGTCTGTAAATCAACTTGCCATCTCAACTTGCCATCATCTCTAT GATTATCTCTATGATAATCTTCTTGGGCAGGGACAGGTACAAGGATTTCA GGGTTATTCTAGTGTGCATTCGGAATTTTTCTACTTATAGACAAGATGGA CTTCATTCACTCTACATCACGCAAATATTCGATGGACAGGCACTACATAC ACAAGGTAAGTATGAAAAGCTTACAACAATAAAGTGACTAACTTTCAGCT TGACATGAATCATTGAGCCACTACCTCATCCTTTCACAGCGTTTAGGTTT GAAGTACCGGAGTCTGAAGCGGTACATGGGATGGGGAGCGTCGATTATAG GATTCATATCAGTTGTGTGGGTCTACACGAATGTCGAAGTATGGAAGCGA GAGGCCCCCAAAAAAGACGGCCAAGATGTCCATCTCACTGGCCCCCTCTC TTCTATCCAGCACGCCTTTCAGCGTTTGCCAGGGCCCATTTCCTCCTACA TTCATTTTCGTCGAGCAGATCCTGATACTATTCATACACTTGGGCAGCGG GCGCTTACGCACGGTCATTACCATGACGCCATTAAAGTATTTCAGTATTT GCTCGAGGCTAATACTACGGCAGTACCATCTAACATCATGGCGACAAGTA GTTATGGCCTGATTCGCAGCTTCATCGCCTTGCATCAGCTAAAGCCAGCC AGATTGTGGACGGATTGGTACTACTATAACATTGTGCCTTTACAGGGAGA GCCGGCATATCATCTATGTCGAGCACTACGAGAGGATGGCCAAAGTGCTG CAGCGTTCTACTATTACCTAATGGCTGAAAAGACACTGTCAAGTTCAGCC GCCATTTCGTATATTCCTGCGGAGCATGAAATATGCGATTATCTGCTGGA TTATGAAAAATCCATCCTCTGGTCATATCTGGGCGACAGTCGAGACTCGT CTTATTTGCTTCATGGATTAACCTTTTCGATGCGCATGCTCGAGAATCCA AAATTACCTGAATACATCCGAGACTCTGTCTTCAGCAACCTCCAGTATTA TGTCTCCAACCTAGATGGACAGGTCGAAGTTCTCCGCTCAAAAGACTCAC TGGACGAAGGTTGGCATTATTCATCTCCAACATTCATCGGCGATGAAACG CTAATCCACGTCGTCAACTATTACATTTCTGAGGATGGTATTTACCACGT GTCCAAGGGTGACCACGGGAGATCACGGCTGCTTTCTGCTGCCACGGATA AAGACTTTGAAATCGTTCTTTCCGAGACATTCGAAGACCGTGTCGTCCGG GACGGACTACATCACGACGATGCCTACATATTAGGACTGGAGGATACACG TGCTGTTGTGGATGTTAAGTGTAACAATACTATTTTTACTTTATCGGCTT CGCAAGAATATTCACGAAGCCCTGGGGTCATTAGTCAAGTCCTTGGCACA TTAAACTTGGAAGAGCGCAAAATACAAGTCGAGGCCGTGCTGGAGGGACC GTACGCTGGTCGTAACGAAAAAAATTGGGTTTTTGCTGGCAGCCTTGATA AAATCGTTTATAAATGGCACCCATCTATCGAATTGGGAGCCATCGACCTC TCCAATGATACAAGTTTCCATATTCACACATCTATCCCTTCGCCTGAATC TTTCAGGGGCATGCGCGGATCCACCAATGGAGTATTATACCGGGAGCAAT GGTGGTTCGTAACGCATTCCCATATTTACCGGGAGGGCCAGATGCGCAAG TATCTTCATTATCTCGTAGTACTAAATCAAGAGTTGTCGGCCATCGTTCG ATACTCGCTACCTTTTTCTTTCGAGGAGGGTTCCGACATCGAATTTTGCT TGGGTTTGAAAGTTGAGGAGTCCGGTATTGTCTTCGGATACAGCGCCAAG GAGAAATCGACAAAGATAATGAGGATTCACTGGCCGGAAATGGGTCGCAT GTTCAATTAGATGCTTTACCAAATCCAATATACGGAATATTGTAGATATG TATCCTCCCAAAAAAAGAAGAATCGGGAAAAAAATGACTTTCTAAAAACA AATTGAGGGTGATATTTTCAAGCGCCTTAACTATTCTGCCCTCTACTGTT ATCAACTCATCGCCGAGGAGATATGTTGGGCCTGCAAAGCTGAACTGGAA GGCGTTCTTAGATTCTCGAGATGCATGCTGTATGTCCATATCTCTCTTCC ATATCTAACCCTAACAGATGTGCAACGCGTTAGATAGGGAAGGCTTGGAG GTGGTTCTGGCCGATAAGCGCGCACTGGCTGACGTTTTGGAGCAGCCGCG ACCTTTTTGCCTGCGCGAGCAGTTGCATAACTATCTGGATCCTGGAAGTG TATGGAGAGTTTGCGCAGGAGATGAGCAGCAGCTTTAGTGTGGGGCATGC CGGAAGCTAGGCGGTCATGCCGACCCTGATACAGTACAGCATTACAAGAC TAACCTTGTTCCAGCCGCTGGATTTTCCATCGCTCCCGCACAAGGCACGA CGAAGAGTATGACACTGTGGTGGACGGGCCAGACCTAGACATGAGAGACC GTGGCTAGGACGACCCCTACACTACCGCGCCAAATTAAAATTGTTTCCAA GATAATTTGGACGACGAACTCATGAATATCAACGTTCCTTCTTCTTCCTT GTCTTCCTCGCCTCCTCAATCTTCGGCGTGAGTATTTTTTGAGGAGGTCC CTGCTTCTTTGTGGACACAACAAGCATTGAGTTCACCTTCCTATTTCCCT ATTGCGTCCACTGGTGCTGTCACTTTGTCTTCTCGTTCCTCGTTGGCTCC TCTTCCTCAGGCTCGTGTGGCTCGTTCTTCCCTATCTCGGATGCGCCCAA CTCCTCCGGTGACTACTGAAATGGAATCTCGCTCCATCTTCGCGACCCCC AACTTCGTCCTTTGCTGCCCCTCGTGTGACTTCATCAACAAGCTTAAGTT TCGCTTTTCCTCGTCCTACATCGTCTTCTCTTGATGACCATGCATCACGC AAAGCTGCAATTACCTCGGCTTTGACAGTGTTTGTGAGAGAAGCGCAGAA AGGTATGACGCCATCCCTCTCCAAACAAATTTAAAAAACAAGGGTTTCCA GCGTTCTTCTCCTTCCACAAATCACCAACGCATATGCATGCTACGCAATA CACATGAGGCAAAATACAATTTACAAGACGCTATGCAGTCTTTTGTGATG TCGTCCCGAGGTTTGTGTGGTTTTGAGC
back to top

Coding sequence (CDS) from alignment at chr13:1035604..1041681+

>NO13G03460.6 ID=NO13G03460.6|Name=NO13G03460.6|organism=Nannochloropsis oceanica|type=CDS|length=1731bp|location=Sequence derived from alignment at chr13:1035604..1041681+ (Nannochloropsis oceanica)
ATGGACTTCATTCACTCTACATCACGCAAATATTCGATGGACAGGCACTA
CATACACAAGCGTTTAGGTTTGAAGTACCGGAGTCTGAAGCGGTACATGG
GATGGGGAGCGTCGATTATAGGATTCATATCAGTTGTGTGGGTCTACACG
AATGTCGAAGTATGGAAGCGAGAGGCCCCCAAAAAAGACGGCCAAGATGT
CCATCTCACTGGCCCCCTCTCTTCTATCCAGCACGCCTTTCAGCGTTTGC
CAGGGCCCATTTCCTCCTACATTCATTTTCGTCGAGCAGATCCTGATACT
ATTCATACACTTGGGCAGCGGGCGCTTACGCACGGTCATTACCATGACGC
CATTAAAGTATTTCAGTATTTGCTCGAGGCTAATACTACGGCAGTACCAT
CTAACATCATGGCGACAAGTAGTTATGGCCTGATTCGCAGCTTCATCGCC
TTGCATCAGCTAAAGCCAGCCAGATTGTGGACGGATTGGTACTACTATAA
CATTGTGCCTTTACAGGGAGAGCCGGCATATCATCTATGTCGAGCACTAC
GAGAGGATGGCCAAAGTGCTGCAGCGTTCTACTATTACCTAATGGCTGAA
AAGACACTGTCAAGTTCAGCCGCCATTTCGTATATTCCTGCGGAGCATGA
AATATGCGATTATCTGCTGGATTATGAAAAATCCATCCTCTGGTCATATC
TGGGCGACAGTCGAGACTCGTCTTATTTGCTTCATGGATTAACCTTTTCG
ATGCGCATGCTCGAGAATCCAAAATTACCTGAATACATCCGAGACTCTGT
CTTCAGCAACCTCCAGTATTATGTCTCCAACCTAGATGGACAGGTCGAAG
TTCTCCGCTCAAAAGACTCACTGGACGAAGGTTGGCATTATTCATCTCCA
ACATTCATCGGCGATGAAACGCTAATCCACGTCGTCAACTATTACATTTC
TGAGGATGGTATTTACCACGTGTCCAAGGGTGACCACGGGAGATCACGGC
TGCTTTCTGCTGCCACGGATAAAGACTTTGAAATCGTTCTTTCCGAGACA
TTCGAAGACCGTGTCGTCCGGGACGGACTACATCACGACGATGCCTACAT
ATTAGGACTGGAGGATACACGTGCTGTTGTGGATGTTAAGTGTAACAATA
CTATTTTTACTTTATCGGCTTCGCAAGAATATTCACGAAGCCCTGGGGTC
ATTAGTCAAGTCCTTGGCACATTAAACTTGGAAGAGCGCAAAATACAAGT
CGAGGCCGTGCTGGAGGGACCGTACGCTGGTCGTAACGAAAAAAATTGGG
TTTTTGCTGGCAGCCTTGATAAAATCGTTTATAAATGGCACCCATCTATC
GAATTGGGAGCCATCGACCTCTCCAATGATACAAGTTTCCATATTCACAC
ATCTATCCCTTCGCCTGAATCTTTCAGGGGCATGCGCGGATCCACCAATG
GAGTATTATACCGGGAGCAATGGTGGTTCGTAACGCATTCCCATATTTAC
CGGGAGGGCCAGATGCGCAAGTATCTTCATTATCTCGTAGTACTAAATCA
AGAGTTGTCGGCCATCGTTCGATACTCGCTACCTTTTTCTTTCGAGGAGG
GTTCCGACATCGAATTTTGCTTGGGTTTGAAAGTTGAGGAGTCCGGTATT
GTCTTCGGATACAGCGCCAAGGAGAAATCGACAAAGATAATGAGGATTCA
CTGGCCGGAAATGGGTCGCATGTTCAATTAG
back to top
Synonyms
Publications