NO13G03440, NO13G03440 (gene) Nannochloropsis oceanica

Overview
NameNO13G03440
Unique NameNO13G03440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1462
Alignment locationchr13:1028273..1029734 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:1028273..1029734 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G03440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G03440.1NO13G03440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G03440.1NO13G03440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G03440 ID=NO13G03440|Name=NO13G03440|organism=Nannochloropsis oceanica|type=gene|length=1462bp
ATGGAAGCGGAGGACGGAGAGGAGGGGCTCGGATGGGAAGGAGAGAAGAA
GCGAGTCCATGCTATCAGGGCGAAGCCTGAAGACGAGGAGTACGATGACG
AGAAGGAGGAGAGGAAGACTAGGAGGAGGGAGGCGCGCTAgtgtcctcgt
cttcatttctccccttcctccctttctccctcctatgccaaaagtgtctt
ttgacaaggtggaattaaaattgacatcatattttgacagcccaacatag
ttggccaatcacggcgggaaaagaaagacagagagtaacggctggtctgt
tcaaaattttgaacacctagggaggttggtggaggggttagagggtacag
ggggcccacacaatgtcgcacacacgtacccagatgaacacacatacata
aacttagCGCGTGTGGTAGCAGCAGCATCAGCAGCATCAGCAGCATCAGC
AGCATCAGCAGCATCAGCAGCATCAGCAGGAGCAGCAGCATCAGCAGCAG
CAGCAGCAGCAGCAGCCGCAGCAGCATCAGCATCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCTGGTGCCACCGTCCACCACAACCCACCACAAAC
ACCTTTCTATCATCCCTACCAGCGCTCGGGCCTTCACCTGCCACGCCTCT
TTCCGGTGCACGCACCACATGCACGGGCGGACTCCGCACGCATCACCAGT
CCAACTTATGACAGGCTGCCCGTCGAAGCTAAGGTTTGAAGCACCACATA
ATCCATTTACAAGACACCCAATCGGTATATACGAGCCTTTTAAAACGAGT
CCACTGTCAGAGGTCTTGTGTTTAGCCAATTCTTGGTATTGCATCGTCTA
GATGACAACAAAGGGTGTCCATACTGCTGTAGGGAGGGAAAGAAAGAGAG
AGAGCAAGGAAAGCAAAGCCGGCGGAAAGGAAACGCAGCTGGCTATAAGC
CACTTCAAATGAAAGCAAAGGAGACAGCACGCTCCCACACTGTCAAGGCG
ATGACAAGGAAAAAATGAAGCATGGAGGTGAGGACTCACACTCCACTCTC
CTATGCAACCAACACATCCATCATACCCCCGCCCCCCCGGCCCCTCAAGG
CTCACCTCCTCCGAACGCATCCCATCCTTTTCCTACATTTCTTCTCTTTC
CCCTCTCTATATTCCCTTTCAACAGGCCAAGGTATGACTGATGCTGGTGT
TGCATCCAATGTCAACGGAAAGAGGAGAGGGGGGCGGCAAGAAATCGAAA
TAGCCCAACGGATGCTCTAGCTGACTAAGACAAGCAGGATGACGTCGAGA
ATCATGTTGGTCGTGGCTGCAGAAACGTGTAGATCGCGAAGCAGATGAGG
ACGGGATAGGGCGAGAACCAGACCGGATTGGTGGGAGCGAGCGACGAGGG
AACGAGCGACGACGGAACGACCGACGAGGGAGCGAGGGTGGGGGGAGGGA
GGGAGAGAGGGG
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protein sequence of NO13G03440.1

>NO13G03440.1-protein ID=NO13G03440.1-protein|Name=NO13G03440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=148bp
MEAEDGEEGLGWEGEKKRVHAIRAKPEDEEYDDEKEERKTRRREARYACG
SSSISSISSISSISSISSISRSSSISSSSSSSSRSSISISSSSSSSSSSS
WCHRPPQPTTNTFLSSLPALGPSPATPLSGARTTCTGGLRTHHQSNL*
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Synonyms
Publications