NO13G02720, NO13G02720 (gene) Nannochloropsis oceanica

Overview
NameNO13G02720
Unique NameNO13G02720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2105
Alignment locationchr13:747599..749703 -

Link to JBrowse

Properties
Property NameValue
DescriptionMov34 mpn pad-1 family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:747599..749703 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
GO:0000338protein deneddylation
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
GO:0008180COP9 signalosome
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR033859MPN_CSN6
IPR024969Rpn11/EIF3F_C
IPR000555JAMM/MPN+_dom
Homology
BLAST of NO13G02720 vs. NCBI_GenBank
Match: EWM21938.1 (mov34 mpn pad-1 family protein [Nannochloropsis gaditana])

HSP 1 Score: 392.5 bits (1007), Expect = 1.500e-105
Identity = 208/314 (66.24%), Postives = 245/314 (78.03%), Query Frame = 0
Query:   29 QEGEGNRSGRHIALHPLAIVTICDHCTRVKVGGSLLHPTSRILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLHVDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKFAVAFG 343
            +E  GN+SGRH+ALHPLA+VTICDHCTRVKVGGSLL  TSRILGILFGVQ+GLQVSITDAFELQYE++   +GSV+IP GYVNEK+ELFGAV+ GAEVMGWYSVGE +LPGDLEIHRAM EWNESPFFLLLSPAAS GG   G A G VKEGELP R+FE+ELH+ RGVP+M+FV VPFRL+AAEAERISVEHVVKAAP+E AS VDLHVD V++SL ALV RVK IL++L+ +K      G    D +LLRMV +LCD LPAAG  G     +++++             LAS++KLS L+ ++ E   V  G
Sbjct:   45 EEEAGNKSGRHVALHPLALVTICDHCTRVKVGGSLLPVTSRILGILFGVQNGLQVSITDAFELQYEITE--NGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPG-VKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLHVDVVKSSLSALVARVKAILRLLQAVKT-----GQAPPDRRLLRMVRALCDRLPAAGPSG-----DFQDALTXXXXXXXXXXXLASITKLSSLSSDMRELEGVRVG 345          
BLAST of NO13G02720 vs. NCBI_GenBank
Match: CBN76683.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 226.1 bits (575), Expect = 1.900e-55
Identity = 122/308 (39.61%), Postives = 181/308 (58.77%), Query Frame = 0
Query:   35 RSGRHIALHPLAIVTICDHCTRVKVGGSLLHPTSRILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLHVDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKFAVAFG 343
            + G +I LHPL ++TI DH TRV  GG       R++G+LFG Q+G  VSI DA E+    +  G   + +    V +++ L+ AV+P  E++GWY+VG  +   DL I R M ++N SP FLL++P+ + G              ELPV + ESE H+  GV    FV++ F+L   +AE+ISVEHV KA P +G SS+DLH   V TSL+ L+ R++ + + LE  K+G       + D+ LLR + S+C+ LP    +G     ++ E F+RE++DSL V YLASV K +    ++++KF  AFG
Sbjct:   31 KKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEV--ACTAVGANGLELNEALVEKQKNLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSK------------ELPVLIHESESHMLDGVAQSTFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGN-----ISVDYPLLRQISSICNQLPT--MDGA----QFSEEFMREFNDSLSVAYLASVQKSAGSMNDLADKFMTAFG 313          
BLAST of NO13G02720 vs. NCBI_GenBank
Match: XP_009515578.1 (hypothetical protein PHYSODRAFT_353509 [Phytophthora sojae] >EGZ28303.1 hypothetical protein PHYSODRAFT_353509 [Phytophthora sojae])

HSP 1 Score: 216.1 bits (549), Expect = 1.900e-52
Identity = 117/314 (37.26%), Postives = 188/314 (59.87%), Query Frame = 0
Query:   29 QEGEGNRSG-RHIALHPLAIVTICDHCTRVKVGGSLLHPTS-RILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLH--VDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKFA 339
            +E  G   G R I +HPL IV + DH TR K    L    + +++G LFG+Q GL V + D+FE++Y++  +G+  ++I   ++  + + F  V PG E++GWY+VG  +LP DL +HR + E+NESP F++L P +           G   + +LP+ LFESELH+  GVP M+FV+ PF++  +E E I+++H+ K AP+  AS   LH  +  VR ++K L  +V  +L+ L+ +K G  E  L   D  LLR + S+C+ LPA   E       ++ +F +EY+D+L+V+YLA+++K +     V ++FA
Sbjct:   20 REDSGAGGGERQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVGSSGE--IQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKVLPSDLAVHRVVMEFNESPLFMILDPESK----------GPSTKKKLPISLFESELHMLNGVPKMIFVKAPFKIDTSETEGIAIDHISKIAPIGDASKSTLHPYLGNVRDAVKMLDRQVDVLLRFLQAMKNG--EAPL---DHNLLRHISSICNQLPAMTSE------HFDAAFTQEYNDALLVSYLATLTKGATNANTVVDRFA 310          
BLAST of NO13G02720 vs. NCBI_GenBank
Match: XP_009034108.1 (hypothetical protein AURANDRAFT_70774 [Aureococcus anophagefferens] >EGB11772.1 hypothetical protein AURANDRAFT_70774 [Aureococcus anophagefferens])

HSP 1 Score: 215.3 bits (547), Expect = 3.300e-52
Identity = 118/300 (39.33%), Postives = 175/300 (58.33%), Query Frame = 0
Query:   38 RHIALHPLAIVTICDHCTRVKVGGSLLHPTSRILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLHVDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKF 338
            RH+ LHPLAIV + DH TRVK+GG+ + P S +LG+LFG Q GL V++ DA EL        DG  ++   ++ ++ ELF  V+   E++GWY + +S  P  L++HR    +NESP  L++ P  S+            +  +LP+ + E+E+ V   VPTM+F  +PF L   +AERIS+E V K AP +G S++D HV+ V TSL+ L  RV  ++  L  +      GG    D+ LLR V  LCD+LP        G  +     +R+Y+D+L+V+YLASV+K +    ++SEKF
Sbjct:  840 RHVGLHPLAIVGVSDHFTRVKLGGARVAPDSPVLGLLFGKQVGLDVAVFDAIELS-----MADG--KLDHDFLKKQAELFTDVYADRELLGWYCLAKSATPAHLDLHREFLAYNESPLCLMMDPEPSA------------ESKDLPITILEAEVQVVDDVPTMLFATLPFTLETLQAERISMEIVAKTAPTDGESALDTHVEAVDTSLRTLGSRVAVLVDYLRAV-----AGGKAEPDFALLRQVSGLCDTLPTG------GAPDQTRDLMRDYNDALMVSYLASVTKNANAVNDLSEKF 1109          
BLAST of NO13G02720 vs. NCBI_GenBank
Match: ETL87408.1 (hypothetical protein L917_13399 [Phytophthora parasitica])

HSP 1 Score: 211.5 bits (537), Expect = 4.800e-51
Identity = 111/303 (36.63%), Postives = 180/303 (59.41%), Query Frame = 0
Query:   38 RHIALHPLAIVTICDHCTRVKVGGSLLHPTS-RILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLH--VDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKF 338
            R I +HPL IV + DH TR K    L    + +++G LFG+Q GL V + D+FE++Y++     G ++I   ++  + + F  V PG E++GWY+VG   LP DL +HR + E+NESP F++L P +           G   + +LP+ LFESELH+  GVP M+FV+ PF++  +E E I+++H+ K AP+  AS   LH  +  VR ++K L  +V  +L++L+ +K G        +D  LLR + S+C+ LPA   E       ++ +F +EY+D+L+V+YLA+++K +     V ++F
Sbjct:   31 RQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVV---SGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFIILDPESK----------GPSTKKKLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRLLQAMKIGE-----APQDHNLLRHISSICNQLPAMKSE------HFDAAFTQEYNDALLVSYLAALTKGATNANTVVDRF 309          
BLAST of NO13G02720 vs. NCBI_GenBank
Match: ETI40610.1 (hypothetical protein F443_14049 [Phytophthora parasitica P1569] >ETL34130.1 hypothetical protein L916_13591 [Phytophthora parasitica] >ETM40631.1 hypothetical protein L914_13486 [Phytophthora parasitica] >ETP38532.1 hypothetical protein F442_13890 [Phytophthora parasitica P10297])

HSP 1 Score: 210.7 bits (535), Expect = 8.100e-51
Identity = 113/303 (37.29%), Postives = 181/303 (59.74%), Query Frame = 0
Query:   38 RHIALHPLAIVTICDHCTRVKVGGSLLHPTS-RILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLH--VDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKF 338
            R I +HPL IV + DH TR K    L    + +++G LFG+Q GL V + D+FE++Y++     G ++I   ++  + + F  V PG E++GWY+VG   LP DL +HR + E+NESP F++L P +           G   + +LP+ LFESELH+  GVP M+FV+ PF++  +E E I+++H+ K AP+  AS   LH  +  VR ++K L  +V  +L++L+ +K G  E  L   D  LLR + S+C+ LPA   E       ++ +F +EY+D+L+V+YLA+++K +     V ++F
Sbjct:   31 RQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVV---SGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFMILDPESK----------GPSTKKKLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRLLQAMKIG--EAPL---DHNLLRHISSICNQLPAMKSE------HFDAAFTQEYNDALLVSYLAALTKGATNANTVVDRF 309          
BLAST of NO13G02720 vs. NCBI_GenBank
Match: XP_008909516.1 (hypothetical protein PPTG_14750 [Phytophthora parasitica INRA-310] >ETN05046.1 hypothetical protein PPTG_14750 [Phytophthora parasitica INRA-310] >ETO69307.1 hypothetical protein F444_14079 [Phytophthora parasitica P1976] >KUG02204.1 COP9 signalosome complex subunit 6a [Phytophthora nicotianae])

HSP 1 Score: 210.7 bits (535), Expect = 8.100e-51
Identity = 113/303 (37.29%), Postives = 181/303 (59.74%), Query Frame = 0
Query:   38 RHIALHPLAIVTICDHCTRVKVGGSLLHPTS-RILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLH--VDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKF 338
            R I +HPL IV + DH TR K    L    + +++G LFG+Q GL V + D+FE++Y++     G ++I   ++  + + F  V PG E++GWY+VG   LP DL +HR + E+NESP F++L P +           G   + +LP+ LFESELH+  GVP M+FV+ PF++  +E E I+++H+ K AP+  AS   LH  +  VR ++K L  +V  +L++L+ +K G  E  L   D  LLR + S+C+ LPA   E       ++ +F +EY+D+L+V+YLA+++K +     V ++F
Sbjct:   31 RQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVV---SGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFIILDPESK----------GPSTKKKLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRLLQAMKIG--EAPL---DHNLLRHISSICNQLPAMKSE------HFDAAFTQEYNDALLVSYLAALTKGATNANTVVDRF 309          
BLAST of NO13G02720 vs. NCBI_GenBank
Match: XP_002906527.1 (COP9 signalosome complex subunit, putative [Phytophthora infestans T30-4] >EEY65928.1 COP9 signalosome complex subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 210.7 bits (535), Expect = 8.100e-51
Identity = 114/310 (36.77%), Postives = 182/310 (58.71%), Query Frame = 0
Query:   31 GEGNRSGRHIALHPLAIVTICDHCTRVKVGGSLLHPTS-RILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLH--VDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKF 338
            G      R I +HPL IV I DH TR K    L    + +++G LFG+Q GL V + D+FE++Y++    +G ++I   ++  + + F  V PG E++GWY+VG   LP DL +HR + E+NESP F++L P +           G   + +LP+ LFESELH+  GVP M+FV+ PF++  +E E I+++H+ K AP+  AS   LH  +  VR ++K L  +V  +L+ L+ +K G  E  L   +  LLR + S+C+ LPA   E       ++ +F +EY+D+L+V+YLA+++K +     V ++F
Sbjct:   24 GASGGGERQIQIHPLVIVNIADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVC---NGDIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFMILDPESK----------GPSTKKKLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPVGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRFLQTMKNG--EAPL---NHNLLRHISSICNQLPAMKSE------HFDTAFAQEYNDALLVSYLAALTKGATNANTVVDRF 309          
BLAST of NO13G02720 vs. NCBI_GenBank
Match: OWZ24232.1 (COP9 signalosome complex subunit [Phytophthora megakarya])

HSP 1 Score: 210.3 bits (534), Expect = 1.100e-50
Identity = 115/318 (36.16%), Postives = 186/318 (58.49%), Query Frame = 0
Query:   29 QEGEGNRSGRHIALHPLAIVTICDHCTRVKVGGSLLHPTSRILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLH-------VDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKFAV 340
            +E       R I +HPL IV I DH TR ++  +      +++G LFG+Q GL V++ D+FE++Y+++   +G ++I   ++  + + F  V PG E++GWY+VG   LP DL +HR + E+NESP F++L P +           G   + +LP+ LFESELHV  GVP M+FV+ PF++  +E E I+++H+ K AP+  AS   LH       +  VR ++K L  +V  +L  L+ +K G  E  L   D  LLR + S+C+ LPA   E       ++ +F +EY+D+L+V+YLA+++K +     V ++F+V
Sbjct:   20 EESGAGGGERQIQIHPLVIVNIADHQTRQQLSQT---EAPQVIGALFGIQKGLDVAVYDSFEMKYDVA---NGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFMILDPESK----------GPSTKKKLPISLFESELHVLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSTLHPYLVHPYLGNVRDAVKMLDRQVDVLLHFLQAMKNG--EAPL---DHNLLRHISSICNQLPAMKSE------HFDAAFTQEYNDALLVSYLATLTKGATNANTVVDRFSV 310          
BLAST of NO13G02720 vs. NCBI_GenBank
Match: ETK80708.1 (hypothetical protein L915_13691 [Phytophthora parasitica] >ETP10380.1 hypothetical protein F441_13976 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 208.4 bits (529), Expect = 4.000e-50
Identity = 112/303 (36.96%), Postives = 180/303 (59.41%), Query Frame = 0
Query:   38 RHIALHPLAIVTICDHCTRVKVGGSLLHPTS-RILGILFGVQDGLQVSITDAFELQYELSPAGDGSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEWNESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTMMFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLH--VDGVRTSLKALVLRVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGVREWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKF 338
            R I +HPL IV + DH TR K    L    + +++G LFG+Q GL V + D+FE++Y++     G ++I   ++  + + F  V PG E++GWY+VG   LP DL +HR + E+NESP  ++L P +           G   + +LP+ LFESELH+  GVP M+FV+ PF++  +E E I+++H+ K AP+  AS   LH  +  VR ++K L  +V  +L++L+ +K G  E  L   D  LLR + S+C+ LPA   E       ++ +F +EY+D+L+V+YLA+++K +     V ++F
Sbjct:   31 RQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVV---SGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLLIILDPESK----------GPSTKKKLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRLLQAMKIG--EAPL---DHNLLRHISSICNQLPAMKSE------HFDAAFTQEYNDALLVSYLAALTKGATNANTVVDRF 309          
The following BLAST results are available for this feature:
BLAST of NO13G02720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21938.11.500e-10566.24mov34 mpn pad-1 family protein [Nannochloropsis ga... [more]
CBN76683.11.900e-5539.61conserved unknown protein [Ectocarpus siliculosus][more]
XP_009515578.11.900e-5237.26hypothetical protein PHYSODRAFT_353509 [Phytophtho... [more]
XP_009034108.13.300e-5239.33hypothetical protein AURANDRAFT_70774 [Aureococcus... [more]
ETL87408.14.800e-5136.63hypothetical protein L917_13399 [Phytophthora para... [more]
ETI40610.18.100e-5137.29hypothetical protein F443_14049 [Phytophthora para... [more]
XP_008909516.18.100e-5137.29hypothetical protein PPTG_14750 [Phytophthora para... [more]
XP_002906527.18.100e-5136.77COP9 signalosome complex subunit, putative [Phytop... [more]
OWZ24232.11.100e-5036.16COP9 signalosome complex subunit [Phytophthora meg... [more]
ETK80708.14.000e-5036.96hypothetical protein L915_13691 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001625NSK001625Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02720.1NO13G02720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633286gene_9038Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100220g5gene8503Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02720.1NO13G02720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02720 ID=NO13G02720|Name=NO13G02720|organism=Nannochloropsis oceanica|type=gene|length=2105bp
TAGATTGTGGGGGGGTAGCGGTAGAGGACGAGTCGTGAGTCTTGTGCTTT
CGCTCTTTACACTACTTGTGTTGTCGCTTCGGCGAGGCCTCATCCTACAC
AACCTTATGCCACCCTGTCTGACGCAACACAAATACCAGTTACGAACAGG
AGGAACAACAAAACAAATATGGACCAGCCTTGACCAGGCGTGGTGCGCCC
ATTGGGATTGCCATAGCTGCAATCTTACTCCTTTCATGTCCCCGTCTTTA
CTACAGTAGTTCACGACGAGGCCCAGCCAAAACCCTTCACTACGTTGTGC
GAGCGACAGGAATATCTCATCCTCCTTATCTTACACGACACACATCACAA
ATTTGCAGCAATTCTTCGAGCTCCGGTTCTCTGAAGCGACAGCCATGGAC
CTCGAAGGAGGAGGTGGAGGAGGTAGCAGCTCGACCAGCACAAGCAACGC
CATCAATAACAATCTCCTCCTGGAAGGCCAAGAAGGAGAGGGCAACAGAT
CCGGGCGCCATATAGCTCTGCATCCTCTCGCCATCGTCACCATCTGTGAC
CACTGTACTCGGGTCAAAGTCGGTGGCTCCCTCCTACACCCTACCTCGCG
CATTCTTGGCATCCTCTTCGGTGTCCAAGACGGACTCCAAGTCTCCATCA
CAGACGCCTTTGAACTCCAATATGAGCTCTCCCCCGCTGGTGATGGCTCC
GTTCGAATCCCTCCTGGATACGTCAATGAAAAAAGGGAGCTCTTTGGGGC
GGTTCACCCCGGGGCGGAGGTCATGGGGTGGTATAGTGTGGGCGAAAGCA
TCTTACCCGGAGACCTCGAGATCCATCGGGCCATGTGCGAATGGAATGAG
TCGCCTTTTTTCTTGTTATTATCGCCCGCGGCATCGTCGGGTGGAGCGGG
GGCAGGAGTGGCGGCTGGGAGTGTGAAGGAGGGGGAGTTACCTGTACGAT
TGTTTGAGTCGGAATTGCATGTGTCTCGCGGGGTGCCGACCATGATGTTT
GTCAGGGTGCCCTTTCGCTTATCGGCAGCGGAGGCAGAGCGAATTAGTGT
GGAGCATGTCGTGAAAGCGGCGCCGATGGAGGGGGCGAGTAGCGTGGACT
TGCACGTCGATGGGGTAAGGACCAGTCTGAAGGCGTTAGTTTTGAGAGTG
AAGACGATTTTGAAGGTATTGGAGAGGTTGAAGGAGGGAGGGAAGGAGGG
AGGATTGAAGACAGAAGATTGGAAGTTGTTGAGGATGGTTGGATCGTTGT
GTGATTCGTTGCCTGCTGCGGGGCGCGAGGGGGGAAGGGGAGTGAGGGAA
TGGGAGGAGTCGTTCTTGAGGGAATATAGTGATAGTCTGGTTGTGACGTA
CCTGGCGAGTGTGAGTAAATTGTCGTGTCTGACTGGTGAAGTGAGTGAGA
AATTTGCGGTGGCCTTTGGGGAGGGCCGGGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GAGGGGGGGAAGAATCAGGCGCTGGAGAGGAGGGGGGGAGGAAGGGTGAA
ATCTGGGAAGGATCGAATATATTAGGATCGAAATGGCGCGAGAACGACGG
CATGAGGTGTCATTTGTTTGGTGGGGGGAAGAGGGGTGCTGGTGGTGGAG
TAAATGGAGTTAATGACAGAAAGGGCATTAGATCGCTTTTCTGCTGGGGG
GGGGTGGTTGCGGCCGGGAGGGAATGAAAGGGAGAGCCGCCGACGAGAGT
ATGAGGATTCGAGATCAGGGTATCAAATATGAGCAAATACAAAGCGCAAA
AGACGGTGAGGTTGCTGAGGGGATGTTATGAAAGGAAGAAAAAGAAGAGT
GTTTCACAGCCATACCCCCACTTTTGGAACAATCCTTGTGTCCCCCACTG
TCCTGTTGGTGTTCTGTGTTGCATACTGTAAATGGGGCTGCACGACCAAC
CTCGACAATTTAAGTTTGAAAGACGTGCCTGCACAGTCGATGATGAACCT
CAACACAAGAGGTGGGACACGAGCGGCCGCCAGCAACCTGTTGTTTACGC
TCGTTCCCATGTAATGTATTCTCTCCCTACCTAAGCAACTTTCATTTATA
TAAAT
back to top

protein sequence of NO13G02720.1

>NO13G02720.1-protein ID=NO13G02720.1-protein|Name=NO13G02720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=385bp
MDLEGGGGGGSSSTSTSNAINNNLLLEGQEGEGNRSGRHIALHPLAIVTI
CDHCTRVKVGGSLLHPTSRILGILFGVQDGLQVSITDAFELQYELSPAGD
GSVRIPPGYVNEKRELFGAVHPGAEVMGWYSVGESILPGDLEIHRAMCEW
NESPFFLLLSPAASSGGAGAGVAAGSVKEGELPVRLFESELHVSRGVPTM
MFVRVPFRLSAAEAERISVEHVVKAAPMEGASSVDLHVDGVRTSLKALVL
RVKTILKVLERLKEGGKEGGLKTEDWKLLRMVGSLCDSLPAAGREGGRGV
REWEESFLREYSDSLVVTYLASVSKLSCLTGEVSEKFAVAFGEGRGGGGG
GGGGGGGGGGGGGGGGGGGRGGRIRRWRGGGEEG*
back to top
Synonyms
Publications