NO13G02640, NO13G02640 (gene) Nannochloropsis oceanica

Overview
NameNO13G02640
Unique NameNO13G02640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2089
Alignment locationchr13:728684..730772 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:728684..730772 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G02640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR024ncniR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02640.1NO13G02640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|618427gene_11395Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02640.1NO13G02640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02640 ID=NO13G02640|Name=NO13G02640|organism=Nannochloropsis oceanica|type=gene|length=2089bp
TGTCAGGCCGCACATTCGCTTGAAGCACAAGCCAGTAGCGTCATACAGTG
TACTTTAACCGCGACCACTAACTTGCTGACTTTGTAATTGACCCTTAGCT
TCCCAACCACAATTACTTCACTTTCGGGGACGTATTGTATTGTAATACAC
ACTCACATTCTATGTATTCACTTCTTGCATCGTCTTCCCCGCAAACAGGC
CTGTGTATCTGCCAGACATTGAACGTTTGACAGCTTGACAAGGGGATGGT
CCATCCTTCCATGCGGCCAGACTCTGCTCGTCGTTCCACAGGCCAGCGTT
CTCGGCCGCCAGCACCACCATCAAGTCCACCCCCAGACTACATGGCGACG
TCGATCCCGATTCCATTCTATCCGTCATCGCTCCGTCCTCCCGCCAATCA
GCTACGACAAAGCCCTGATCCAGCTCCTATTCCTCCTGCTCCTACCCCGG
CTCTTTTGTCACCCGTCCCTCCGGTGCGCCCTCGACAAGCGACCCGCGCC
CATGTTAAGATCCGGCAGCGATTCGCGCTGCCTGCAGAACTCAAAGCAGT
ACTACAGGGCATGACTCCTCCCGAAAGACCTCGATTTATTGTCCCTACCC
GTCGAAGCTTCAGTGAAAAAGAGGACAAATGTGGAGATCGGAAGCGTCGC
CGACCTGCTTCCCTGCCAGTTCTCCACCCACCGGTGTCCGTGTCACAATG
CTCAGCAGTACCTCCAGAGATGGGCTACTTGGAAAACGCCATGGCCCGCC
TTTCCTTAGATCTACATGATTTCCAGCAGGAGCTTCGCACTCAACATCAC
TACGCCCCAGCGACGGCACCCTTGAGCTGCTGTATGGCCACAGCGCCCTC
TTACAGAGTCCTTTCCACAGCTGCGGCCTCCTTGCCCATACCCGAAAGGA
AAGGGGTCATGAAGCGCTGTGTCAACGACAACAGTGGTAACAATGGCAGC
TGCAGCAACAATAGCAACAACAATAGCGATAGCACCCAAAGGAGCAGAAG
AAATGGCGGCCCCAGGTTCACTGTGCGAACTGCAGACGGCACAGAGGTGG
TGCTTGACAATAGGGGCGTGGACAGCCGAATGGTGGAGATTCTAGTGGGG
GATTTAACTGGTGTTTATTGCACAGGTTCGCAAACGTACAATGTGCCACG
ATTAAGTACTCCTTCGCCATTGGGGAAGGCAGCGGCTTGCACCGCTACCA
CGCAGGATGTTTGTACCTCGCCATCCATGTCTTTATTGCCAACTCAAGCC
AGCGATGCAACGTCCGAGACTGAGGATGGTAGTGTGGCGTCGGCTGCGAG
CTCTGGTTGGTTCCAGAAGCAAGGGGTTCTACAGCAGCATGCTCCTCCAA
TTTTCTCCTCTTCTCCGTCTTTGAAGGTGGAAACGCGCTTTGGAACAGAT
GAGGTCGACGATGAGAATCACGACGACAACAACGGAGATGCTTTTTCCTC
CCCAGTAGCAGAGTCAACGAGTCTGTCGCTGGCGTCCTTGCCTATTGAAT
GGCCCGTGCCAGCGCCTTCCCCGCTACCCTCGCAGTCGCCTCACTCGCAG
TCGCCTCACTGCTTTTCGTCCCCAGAATCGTGCTTCTCCCCTTTTGTCCC
CGAGGGCCGAAGTGTGGAGAATGAGAGGGAGAAAGTGACTGTTGAGGAGG
AAGAGCAGAATCAGGACCAAGGGCAGGAAACAAGCATTTCCAAAAGCAGC
CGAAGCACCAGCCGGTGTAGCAGCTATTATTATGATTGCTCCTTTCCCTC
TATGTTAGTGGCGGGTGATGGTGATGAAGATGGGTACAGCACAGACTCCT
CCAGATCTTCCTCTTTCTCCTCTTGCTCGATGTCGTCCTCTTTTGCCTCC
TCCTCCTCTTCCTCTTCTCATTGCTCATCTTCCTCCTCCACCATTTCCGC
TTGCTGTCGCACAGTACTGGGAAGAGATCCTGCTTTTGGCGCCACTTCAA
CGTGCCCGATCCGTCTTTTACGTTGGTAATTCGCCATGAGGAAGAGAAAT
CTCGGGAAGACAGGCAAAGAAAATATCGTTGGTGATACATCACGAGGGGG
AAATGTCACCGAATTATTAAAAGATTAAAAGTAATAAGT
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protein sequence of NO13G02640.1

>NO13G02640.1-protein ID=NO13G02640.1-protein|Name=NO13G02640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=578bp
MVHPSMRPDSARRSTGQRSRPPAPPSSPPPDYMATSIPIPFYPSSLRPPA
NQLRQSPDPAPIPPAPTPALLSPVPPVRPRQATRAHVKIRQRFALPAELK
AVLQGMTPPERPRFIVPTRRSFSEKEDKCGDRKRRRPASLPVLHPPVSVS
QCSAVPPEMGYLENAMARLSLDLHDFQQELRTQHHYAPATAPLSCCMATA
PSYRVLSTAAASLPIPERKGVMKRCVNDNSGNNGSCSNNSNNNSDSTQRS
RRNGGPRFTVRTADGTEVVLDNRGVDSRMVEILVGDLTGVYCTGSQTYNV
PRLSTPSPLGKAAACTATTQDVCTSPSMSLLPTQASDATSETEDGSVASA
ASSGWFQKQGVLQQHAPPIFSSSPSLKVETRFGTDEVDDENHDDNNGDAF
SSPVAESTSLSLASLPIEWPVPAPSPLPSQSPHSQSPHCFSSPESCFSPF
VPEGRSVENEREKVTVEEEEQNQDQGQETSISKSSRSTSRCSSYYYDCSF
PSMLVAGDGDEDGYSTDSSRSSSFSSCSMSSSFASSSSSSSHCSSSSSTI
SACCRTVLGRDPAFGATSTCPIRLLRW*
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Synonyms
Publications