NO13G01870, NO13G01870 (gene) Nannochloropsis oceanica

Overview
NameNO13G01870
Unique NameNO13G01870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1008
Alignment locationchr13:546392..547399 -

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Properties
Property NameValue
DescriptionArabinose 5-phosphate isomerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:546392..547399 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0097367carbohydrate derivative binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:1901135carbohydrate derivative metabolic process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR001347SIS
Homology
BLAST of NO13G01870 vs. NCBI_GenBank
Match: EWM21835.1 (arabinose 5-phosphate isomerase [Nannochloropsis gaditana])

HSP 1 Score: 398.7 bits (1023), Expect = 1.800e-107
Identity = 214/290 (73.79%), Postives = 246/290 (84.83%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSSTEAVAALTAGLKGRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIG 291
            MVASLHA G+P   +GLL MG+VAAAAGAACVEVKGALP P KS ARVLQLA  AQPL DAAALLDM +S S   + +EA  AL AG+K RSP +QAYARSL+ D RAL+ LS GL+LHEKED I +V++LLA AHT + KKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPAT+FVHGD+GSL+RGDVLVCLS+SG+T+ELID TRRVRA+GVDVIA+T N +SPLAQLAD+H+HAKS +E LGK+P+RSIVV EAVSNA +S +A AT  T+  FLDNHPGGSIG
Sbjct:  317 MVASLHAQGFPETADGLLSMGKVAAAAGAACVEVKGALPHPQKSVARVLQLAPEAQPLADAAALLDMGVSPSPDSTLSEAATALVAGVKQRSPSVQAYARSLEEDVRALRTLSAGLALHEKEDTIARVVELLAAAHTTTSKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATEFVHGDLGSLSRGDVLVCLSTSGRTSELIDVTRRVRAKGVDVIAMTANAASPLAQLADVHLHAKS-AEPLGKVPARSIVVQEAVSNAIISAIAQATSLTMAQFLDNHPGGSIG 605          
BLAST of NO13G01870 vs. NCBI_GenBank
Match: XP_008874878.1 (hypothetical protein H310_10312 [Aphanomyces invadans] >ETV96615.1 hypothetical protein H310_10312 [Aphanomyces invadans])

HSP 1 Score: 134.8 bits (338), Expect = 4.900e-28
Identity = 96/292 (32.88%), Postives = 143/292 (48.97%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSS-TEAVAALTAGLKGRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIGA 292
            ++A +H  G P N E  +R+  +A A    CVE  GALP+                   + A  L   L  S+++ + T++V ++        P ++A      +  R ++AL     L    D        +    T+  ++  +YTSGIGKSG+VA R AS+L S+SI S  +  +++ HG++G+L  GDV+V  S+SGKT EL++     R    DV+ +  N  SPL   +D  I   +   L   +P+RSIV  EAV NA    V A T      F  NHPGG+IGA
Sbjct:  298 VIAGVHRWGLPDNHESAVRLATLAGAIRRTCVENLGALPSE------------------ETAVRLQQMLPFSTAIKARTQSVDSM--------PFVKAIDGPNSSLTRDIEALLNLRRLFHNLDYATHFQSFVQRIITSREQRNRVYTSGIGKSGIVAKRFASTLSSLSIPSQWIHGSEWTHGELGNLLPGDVIVLFSNSGKTPELLNLPNVFREFDCDVMCVVGNDDSPLYHASDYKIFTPAKDCLFDSVPARSIVAQEAVCNAVAESVVAITGIKRATFKKNHPGGNIGA 563          
BLAST of NO13G01870 vs. NCBI_GenBank
Match: XP_008874879.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV96616.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 134.8 bits (338), Expect = 4.900e-28
Identity = 96/292 (32.88%), Postives = 143/292 (48.97%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSS-TEAVAALTAGLKGRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIGA 292
            ++A +H  G P N E  +R+  +A A    CVE  GALP+                   + A  L   L  S+++ + T++V ++        P ++A      +  R ++AL     L    D        +    T+  ++  +YTSGIGKSG+VA R AS+L S+SI S  +  +++ HG++G+L  GDV+V  S+SGKT EL++     R    DV+ +  N  SPL   +D  I   +   L   +P+RSIV  EAV NA    V A T      F  NHPGG+IGA
Sbjct:  233 VIAGVHRWGLPDNHESAVRLATLAGAIRRTCVENLGALPSE------------------ETAVRLQQMLPFSTAIKARTQSVDSM--------PFVKAIDGPNSSLTRDIEALLNLRRLFHNLDYATHFQSFVQRIITSREQRNRVYTSGIGKSGIVAKRFASTLSSLSIPSQWIHGSEWTHGELGNLLPGDVIVLFSNSGKTPELLNLPNVFREFDCDVMCVVGNDDSPLYHASDYKIFTPAKDCLFDSVPARSIVAQEAVCNAVAESVVAITGIKRATFKKNHPGGNIGA 498          
BLAST of NO13G01870 vs. NCBI_GenBank
Match: OQR90957.1 (fructokinase [Achlya hypogyna])

HSP 1 Score: 131.3 bits (329), Expect = 5.500e-27
Identity = 94/290 (32.41%), Postives = 144/290 (49.66%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSSTEAVAALTAGLKGRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIG 291
            ++A  H  G P + +  +R+G++A A  AAC E  GALPT  +S  RV +      PL        + + Q + + + E   A                 SL  D  AL  +    +  E   + +  +  + +   N   +  +Y SGIGKSG+VA R AS+L S+S+ S  +  +++ HG++G+L  GDV++ +S+SGKT EL+      R   VDV+ +  N  SPL + +D  I+  +   L   +P+RSIV  E+V NA    V A T      F  NHPGG+IG
Sbjct:  302 LIAGFHHWGVPDDSDSAVRIGKLAGATRAACCETLGALPT-DESFYRVQKF----MPLAFHPVAKRLSVDQETVLRAIEGPNA-----------------SLTRDIDALLHMRRLFTNLEYAAQFEAFVSRIVQCREN---RNRVYLSGIGKSGIVARRFASTLASLSVPSQWIHGSEWTHGELGNLYPGDVVILISNSGKTPELLHLPDVFREFEVDVLCLVGNEESPLFKASDFPIYTPAEDWLFDSVPTRSIVTQESVCNAVAESVVALTGIKRCTFKKNHPGGNIG 566          
BLAST of NO13G01870 vs. NCBI_GenBank
Match: XP_008609210.1 (hypothetical protein SDRG_05277 [Saprolegnia diclina VS20] >EQC37048.1 hypothetical protein SDRG_05277 [Saprolegnia diclina VS20])

HSP 1 Score: 129.0 bits (323), Expect = 2.700e-26
Identity = 94/290 (32.41%), Postives = 144/290 (49.66%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSSTEAVAALTAGLKGRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIG 291
            ++A  H  G P + +  +R+G++A A  AAC E  GALPT  +S  RV +      PL        + + Q + + + E   A                 SL  D  AL  +    +  E   + +  +  + +   N   +  +Y SGIGKSG+VA R AS+L S+S+ S  +  +++ HG++G+L  GDV++ +S+SGKT EL+      R   VDV+ +  N  SPL + +D  I+  +   L   +P+RSIV  E+V NA    V A T      F  NHPGG+IG
Sbjct:  325 LIAGFHHWGMPEDTDSAVRIGKLAGATRAACCETLGALPT-DESFFRVQKFI----PLAFHPLPKRLSVDQETVLRAIEGPNA-----------------SLTRDIDALLHMRRLFTNLEYAAQFQAFVSRIVQCREN---RNRVYLSGIGKSGIVARRFASTLASLSVPSQWIHGSEWTHGELGNLYPGDVVILISNSGKTPELLHLPDVFREFEVDVLCLVGNEDSPLFKASDFPIYTPAEDWLFDSVPTRSIVTQESVCNAVAESVVALTGIKRCTFKKNHPGGNIG 589          
BLAST of NO13G01870 vs. NCBI_GenBank
Match: OQS06795.1 (fructokinase [Thraustotheca clavata])

HSP 1 Score: 128.6 bits (322), Expect = 3.500e-26
Identity = 95/290 (32.76%), Postives = 143/290 (49.31%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSSTEAVAALTAGLKGRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIG 291
            ++A  H  G P + +  LR+G +A A  AAC E  G+LPT  +S  RV +      PL        + + Q + + + E   A                 SL  D  AL  +    +  E   + +  +  + +   N   +  +Y SGIGKSG+VA R AS+L S+SI S  +  +++ HG++G+L  GDV++ +S+SGKT EL+      R   VDV+ +  N  SPL + +D  I+  +   L   +P+RSIV  E+V NA    V A T      F  NHPGG+IG
Sbjct:  297 LIAGFHHWGIPEDVDSALRIGSLAGATRAACCETIGSLPT-DESFFRVQKFI----PLAFHPVAKRLSVDQETVLRAIEGPNA-----------------SLTRDIDALLHMRRLFTNLEYATQFQAFVSRIVQCREN---RNRVYLSGIGKSGIVARRFASTLSSLSIPSQWIHGSEWTHGELGNLFPGDVVILISNSGKTPELLHLPDVFREFEVDVLCLVGNEDSPLFKSSDFPIYTPAEDWLFDSVPTRSIVTQESVCNAVAESVVALTGIKRCTFKKNHPGGNIG 561          
BLAST of NO13G01870 vs. NCBI_GenBank
Match: XP_012197435.1 (hypothetical protein SPRG_03453 [Saprolegnia parasitica CBS 223.65] >KDO31525.1 hypothetical protein SPRG_03453 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 127.5 bits (319), Expect = 7.900e-26
Identity = 94/290 (32.41%), Postives = 143/290 (49.31%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSSTEAVAALTAGLKGRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIG 291
            ++A  H  G P + +  +R+G++A A  AAC E  GALPT  +S  RV +      PL        +   Q + + + E   A                 SL  D  AL  +    +  E   + +  +  + +   N   +  +Y SGIGKSG+VA R AS+L S+S+ S  +  +++ HG++G+L  GDV++ +S+SGKT EL+      R   VDV+ +  N  SPL + +D  I+  +   L   +P+RSIV  E+V NA    V A T      F  NHPGG+IG
Sbjct:  302 LIAGFHHWGMPDDTDSAVRIGKLAGATRAACCETLGALPT-DESFFRVQKFI----PLAFHPVPKRLSADQETVLRAIEGPNA-----------------SLTRDIDALLHMRRLFTNLEYAAQFQAFVSRIVQCCEN---RNRVYLSGIGKSGIVARRFASTLASLSVPSQWIHGSEWTHGELGNLYPGDVVILISNSGKTPELLHLPDVFREFEVDVLCLVGNEDSPLFKASDFPIYTPAEDWLFDSVPTRSIVTQESVCNAVAESVVALTGIKRCTFKKNHPGGNIG 566          
BLAST of NO13G01870 vs. NCBI_GenBank
Match: XP_009833181.1 (hypothetical protein H257_08818 [Aphanomyces astaci] >ETV77394.1 hypothetical protein H257_08818 [Aphanomyces astaci])

HSP 1 Score: 126.3 bits (316), Expect = 1.800e-25
Identity = 96/291 (32.99%), Postives = 142/291 (48.80%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSSTEAVAALTAGLKGRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIGA 292
            ++A +H  G P +    +R+  +A     ACV+  GA P+P ++A R+ +L            L+    S    V  T A  ++ A +   +  I+    SL  D  AL  L       E     +  +  +     N   +  +YT+GIGKSG+VA R AS+L S+SI S  +  +++ HG++G+L  GDV+V  S+SGKT EL++     R    DV+ +  N  SPL   +D  I   +   L   +P+RSIV  EAV NA    V A T      F  NHPGG+IGA
Sbjct:  300 LIAGVHRWGMPDDHSSAVRLATLAGLIRGACVDTVGAWPSP-ETADRLQRL------------LVLPTASPPVPVVKTRA-QSVEAMMMPFAKAIEGPNSSLTRDIDALLNLRRLFHNLEYATHFESFVQRIICCREN---RNRVYTTGIGKSGIVAKRFASTLSSLSIPSQWIHGSEWTHGELGNLLPGDVVVLFSNSGKTPELVNLPNVFRQFDCDVLCLVGNDDSPLYHASDFKIFTPAKDCLFDSVPARSIVAQEAVCNAVAESVVAITGIQRATFKKNHPGGNIGA 573          
BLAST of NO13G01870 vs. NCBI_GenBank
Match: XP_012897001.1 (uncharacterized protein [Blastocystis hominis] >CBK22953.2 unnamed protein product [Blastocystis hominis])

HSP 1 Score: 124.4 bits (311), Expect = 6.700e-25
Identity = 85/300 (28.33%), Postives = 148/300 (49.33%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSSTEAVAALTAGLKGRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEA---------HTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIGA 292
            ++A L+  G P ++  + ++G++ + +GAAC +  G LP              +A+ ++   ++ DM + +   +  ++  A                    +A   AL   +   SLHE ++ +K +++ + ++         HTN      ++ S  G +G V  RLA+SL SI + S  VPA ++ HGD+G LA+GD ++ +S+SG+  +++      R RGV V+ +  N  SPL   AD  +   + +ELL  IP+RSIV  EA  NA VS V    + +  DF+ NHP   + +
Sbjct:  273 LIAGLYHWGMPQSEGDIKKLGQLGSLSGAACCQQFGTLP--------------DAESVMKMTSMDDMNIVKDLFLVPSDETA------------------QSEAPKPALPTNAVEFSLHEDKENLKMLLETIDKSQFERVAEMIHTNQQHGHKLFVSAEGSAGAVGLRLAASLTSIGVSSQFVPAIEWNHGDLGHLAKGDCVLLISNSGRNEDVLRLIEPFRKRGVVVLGMCGNKGSPLLHKADAGLFVPANTELLNCIPTRSIVSQEAAVNALVSQVCLLRNVSADDFIRNHPSDDLAS 540          
BLAST of NO13G01870 vs. NCBI_GenBank
Match: XP_019859150.1 (PREDICTED: probable fructokinase-5 [Amphimedon queenslandica])

HSP 1 Score: 120.9 bits (302), Expect = 7.400e-24
Identity = 94/296 (31.76%), Postives = 148/296 (50.00%), Query Frame = 0
Query:    1 MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQLAGNAQPLVDAAALLDMELSQSSSVSSTEAVAALTAGLK-GRSPVIQAYARSLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGIGKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARG-DVLVCLSSSGKTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHI---HAKSTSELLGKIPSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIGA 292
            ++  L ++G+P +   L R+G +A A GAA V+  G +P P  S+ ++LQ                              +  +T G++ G    ++ +  SL+ DA A + L   LS       +  V+ +L +       +  I+TSGIGKSGL+A+RLA+SL SI + S +V A ++ HGD+G L  G DV + +S SG T+E ++A   V A+GV  I+I     S L +L    +   H     E  G +P+ S+ + + + NA VS +      T  DF  NHPGG+IG+
Sbjct:  311 LIVGLSSYGFPGSVAELERLGGIANAFGAAGVQSVGGVPVP--SSKKLLQ----------------------------HYLPDMTFGVEFGSDEALKGFTSSLERDAAATQQL---LSSDFDRKSLNDVLTILEDC------QGQIFTSGIGKSGLIASRLAASLSSIGVSSQYVNAVEWRHGDLGKLTPGRDVCIFISHSGSTDETVEAAASVLAKGVTTISIAGKQGSSLGKLCTHSVDYSHIDINEEPFGCLPTTSLAIQDILVNAIVSELILRKGVTEKDFGGNHPGGTIGS 567          
The following BLAST results are available for this feature:
BLAST of NO13G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21835.11.800e-10773.79arabinose 5-phosphate isomerase [Nannochloropsis g... [more]
XP_008874878.14.900e-2832.88hypothetical protein H310_10312 [Aphanomyces invad... [more]
XP_008874879.14.900e-2832.88hypothetical protein, variant [Aphanomyces invadan... [more]
OQR90957.15.500e-2732.41fructokinase [Achlya hypogyna][more]
XP_008609210.12.700e-2632.41hypothetical protein SDRG_05277 [Saprolegnia dicli... [more]
OQS06795.13.500e-2632.76fructokinase [Thraustotheca clavata][more]
XP_012197435.17.900e-2632.41hypothetical protein SPRG_03453 [Saprolegnia paras... [more]
XP_009833181.11.800e-2532.99hypothetical protein H257_08818 [Aphanomyces astac... [more]
XP_012897001.16.700e-2528.33uncharacterized protein [Blastocystis hominis] >CB... [more]
XP_019859150.17.400e-2431.76PREDICTED: probable fructokinase-5 [Amphimedon que... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001735NSK001735Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01870.1NO13G01870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596432gene_6818Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100051g33gene8607Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01870.1NO13G01870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01870 ID=NO13G01870|Name=NO13G01870|organism=Nannochloropsis oceanica|type=gene|length=1008bp
ATGGTGGCTAGTTTGCACGCGCATGGGTACCCTAGCAATCAGGAGGGGTT
GTTGCGGATGGGGAGGGTGGCAGCCGCAGCGGGAGCAGCGTGTGTGGAAG
TGAAGGGAGCTTTGCCAACGCCGGGAAAGAGTGCAGCAAGGGTGTTGCAG
CTTGCAGGGAACGCGCAGCCGCTGGTTGATGCAGCTGCTTTGTTGGATAT
GGAGTTGAGTCAGAGTTCATCCGTGTCGTCAACAGAGGCTGTGGCAGCGT
TGACTGCTGGATTAAAGGGTCGCTCTCCTGTTATTCAGGCATATGCGAGG
AGTCTGGACGCGGACGCACGGGCGCTCAAGGCACTGAGTACTGGTTTGTC
ATTGCATGAGAAGGAGGATAAGATTAAGAAGGTGATTGACTTGCTTGCGG
AAGCACACACGAACTCGCCCAAAAAAACACACATTTATACCAGTGGGATT
GGAAAGAGTGGCTTGGTTGCCGCGCGGCTCGCCTCCAGCCTGCGGTCTAT
CTCCATCCGGAGTAGCCATGTCCCGGCCACTGACTTCGTGCATGGAGACA
TGGGGTCTCTTGCGCGAGGCGATGTCTTGGTCTGCCTCTCCTCCTCTGGG
AAAACCAACGAATTAATCGACGCCACTCGACGTGTCCGCGCAAGAGGAGT
GGACGTCATCGCAATCACCCGGAACCCATCTTCGCCCCTCGCCCAGCTTG
CCGATATCCACATACACGCCAAAAGTACTTCGGAATTGCTTGGGAAAATC
CCCTCAAGGTCAATTGTGGTCAATGAAGCAGTGAGCAATGCATTTGTGTC
TGGTGTGGCGGCAGCGACTCATTTCACCGTCTTGGATTTCCTCGACAACC
ATCCTGGGGGGAGCATTGGGGCGGCGGTTTCATCCTCTTTGGCTTCTACT
GCTTCCTGCACCACCTCATCATCTACGGGCGTGGTCGGACCACCGCCTGT
GCCAGGTACTGCAGCTACTGCTTCTTCATCCTCATCGTCGGCGTTGTCGA
GGCCTTAA
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protein sequence of NO13G01870.1

>NO13G01870.1-protein ID=NO13G01870.1-protein|Name=NO13G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MVASLHAHGYPSNQEGLLRMGRVAAAAGAACVEVKGALPTPGKSAARVLQ
LAGNAQPLVDAAALLDMELSQSSSVSSTEAVAALTAGLKGRSPVIQAYAR
SLDADARALKALSTGLSLHEKEDKIKKVIDLLAEAHTNSPKKTHIYTSGI
GKSGLVAARLASSLRSISIRSSHVPATDFVHGDMGSLARGDVLVCLSSSG
KTNELIDATRRVRARGVDVIAITRNPSSPLAQLADIHIHAKSTSELLGKI
PSRSIVVNEAVSNAFVSGVAAATHFTVLDFLDNHPGGSIGAAVSSSLAST
ASCTTSSSTGVVGPPPVPGTAATASSSSSSALSRP*
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Synonyms
Publications