NO13G01700, NO13G01700 (gene) Nannochloropsis oceanica

Overview
NameNO13G01700
Unique NameNO13G01700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2465
Alignment locationchr13:503235..505699 -

Link to JBrowse

Properties
Property NameValue
DescriptionGTP-binding protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:503235..505699 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR008803RHD3/Sey1
Homology
BLAST of NO13G01700 vs. NCBI_GenBank
Match: EWM21833.1 (GTP-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 856.7 bits (2212), Expect = 4.100e-245
Identity = 429/545 (78.72%), Postives = 478/545 (87.71%), Query Frame = 0
Query:   13 VVVLLVVGMVGLVSAAGPLEVIDAMGKLKGKEEVKQFVQKRLKATERAGPVIVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQGGVALCAAGDGVLMCVDYDAVGTGAEEATTNGKILALTTRLADVIVLNLWSSDVGRNVPYNTLALQAIFQEQLQAEGSPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWAGVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFLDLDLLSARYSKRVDRESFPSTLSVLWNEIKGRDFVVLPSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYVGKEEREDLENDAQRGLEEWFAEGAAKVVVPGVVGAGSYEKALSEFVDLLTEYAAKWPQSPAYNVQAMKQLEGGAKKKKGKASWGATFQLVSLLRTPGDGALQGFATYQAGPVQFLCGLQNDRDLPESRLEGKVPPLLRIQPKVAFDVDL 558
            + ++L    V + SAAGPLEVIDA GKLK KEEV +FVQKRLKATERAG VIVGSAGSKGSGKSTLLNKLFDTDFG+GR+LGP ARPQGGVALCAAG G L+CVDYDAVGTG EEA TNGK LALTT+LAD I+LNLWSSDVGRNVPYN+LALQAIFQEQL AEGSPKTLLLV VHDH   +  +RT+EA+L+ L+++WA +P++E+KA AEL++ FD+E+AFLPHPRYRPEEYE A+E LRNRFLDLDLLSAR+SKRVDRE+FP+TL+  WNEIK RDFVVLPS+GELLATHQIE Q   ALATVE KL  WRA  ERGRVV GFGE+  KLY S LE FD ATQPFA SPLRVRKHKEL+ +L RG++DLVR+QL NLQ QGLK+FK  L+ +VGKE+REDLEN+AQRG+EEWFAE A KVVVP V GAGSYEKALS+FV+ LT+YA KWPQSPAYNVQAMK+LE GAKKKKGKASWGATFQLVSLLRTPGDGALQGFATYQAGPVQFL GLQNDRDLPESRLEGK PPLLRIQPKVAFDVDL
Sbjct:   44 LALVLSAWAVQMASAAGPLEVIDAAGKLKAKEEVNRFVQKRLKATERAGLVIVGSAGSKGSGKSTLLNKLFDTDFGIGRALGPHARPQGGVALCAAGGGGLVCVDYDAVGTGTEEAGTNGKFLALTTKLADAILLNLWSSDVGRNVPYNSLALQAIFQEQLHAEGSPKTLLLVVVHDHPEEEAGDRTKEAVLEVLETVWASLPRTEEKADAELTDFFDVEMAFLPHPRYRPEEYERALEGLRNRFLDLDLLSARHSKRVDRETFPATLAAFWNEIKARDFVVLPSQGELLATHQIELQHGKALATVEGKLGMWRATSERGRVVGGFGEIAAKLYTSALEEFDRATQPFAASPLRVRKHKELEGVLARGVNDLVRKQLGNLQAQGLKRFKAALLQFVGKEDREDLENEAQRGMEEWFAENAEKVVVPVVAGAGSYEKALSDFVNQLTDYAHKWPQSPAYNVQAMKKLETGAKKKKGKASWGATFQLVSLLRTPGDGALQGFATYQAGPVQFLMGLQNDRDLPESRLEGKAPPLLRIQPKVAFDVDL 588          
BLAST of NO13G01700 vs. NCBI_GenBank
Match: CBN75362.1 (RHD3a, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic [Ectocarpus siliculosus])

HSP 1 Score: 266.9 bits (681), Expect = 1.400e-67
Identity = 181/559 (32.38%), Postives = 286/559 (51.16%), Query Frame = 0
Query:   25 VSAAGPLEVIDAMGKLKGKEEVKQFVQKRLKATERAGPVIVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQGGVALCAAGDGVLMCVDYDAVGTGAE-----EATTNGKILALTTRLADVIVLNLWSSDVGRNVPYNTLALQAIFQEQLQ------------------AEGSPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWAGVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFLDLDLLSARYSKRVDRESFPSTLSVLWNEIKGRDFVVLPSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYVGKEEREDLENDAQRGLEEWFA-EGAAKVVVPGVVGAGSYEKALSEFVDLLTEYAAKWPQSPAYNVQAMKQLEGGAKKKKGKASWGATFQLVSLLRTPGDGALQGFATYQAGPVQFLCGLQNDRDLPESR--LEGKVPPLLRIQPKVAFDVDL 558
            ++ A  +E++DA GKL    E+       L         +VG  GSKGSGKSTLLN+ F T F VG  L   A      A C   DGVL+ +D D +  GA+     + TT G+  A +  L+DV+++NLW SD+GR+V  N   ++ +F E+LQ                  A     T ++VAVHD       +    A+++++ ++W  V   +  + A L E FD+++  +PHPRY    Y +AIE L+ +   ++  +A          F   ++  W  ++     ++P++ E++A +++++ +   + + + +L SWR  V  GRVV  FGE   KLY S ++ FD  T  F+ S  R  K   L S +  GI +L  RQL+ L  + LK +K  L+  +G +   + E++A    +  F+ E  A  +VP +   G +E    E    L E++ K+  SPA   +A+++++   +K KG+ S G    LV ++R  G G LQGF  Y+AGP     G  ND  LP++     GKV PLLR+QPK+  D+DL
Sbjct:   52 LAGAPTMELVDASGKLASASEITSL----LSGFGGKAMNVVGVLGSKGSGKSTLLNQAFGTSFSVGGPLSQGAPTGVSAAKC---DGVLL-LDCDGLEEGADPTAISKGTTAGQATAFSAALSDVVLMNLWRSDLGRSVASNVRTIKTLFSEKLQEIAAAGLTGDLEEVDSSAAAAFRPTPVVVAVHDCDPGADTDALEWAVMEEMLAVWREV---DHPSGATLQECFDIQVLAIPHPRYHAVAYATAIEALKQKLQTMEASTA-------TAGFRDRVTRAWQAVRDAGATMIPAKSEMVALYKVDSAYGEVMGSADMQLKSWRQTVGAGRVVGDFGERSTKLYRSSVKAFDTKTVRFSTSATRATKRAALLSTMETGIKELYARQLSMLCARALKSYKAALVKLLGDDVLNE-ESEANVLRQTLFSFEADATSLVPDMFSLG-FEDEYEELEADLQEFSEKFADSPAAQAKAVQKVDTKVQKPKGERSVGFGLGLVGMVRQEGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKV-PLLRLQPKLNVDIDL 589          
BLAST of NO13G01700 vs. NCBI_GenBank
Match: XP_005704435.1 (GTP-binding protein [Galdieria sulphuraria] >EME27915.1 GTP-binding protein [Galdieria sulphuraria])

HSP 1 Score: 256.5 bits (654), Expect = 1.900e-64
Identity = 174/542 (32.10%), Postives = 270/542 (49.82%), Query Frame = 0
Query:   44 EEVKQFVQKRLKATERAGPVIVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQG--GVALCA---AGDGVLMCVDYDAVGTGAEEATTN---GKILALTTRLADVIVLNLWSSDVGRNVPYNTLALQAIFQEQL---QAEGSPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWAGVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFL------DLDLLSARYSKRVDRESFPSTLSVLWNEIKGRD-----FVV---LPSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYVGKEE--REDLENDAQRGLEEWFAEGAAKVVVPGVVGAGSYEKALSEFVDLLTEYAAKWPQSPAYNVQAMKQLEGGAKKKKGKASWGAT-FQLVSLLRTPGDGALQGFATYQAGPVQFLCGLQNDRDLPESRLEGKVPPLLRIQPKVAFDVDL 558
            EE      + + A E     ++ + G KG GK+T  N LF T   V   L  + + +G  G  +     +G   L+ +D +       +A  N    +I+ LT  ++DVI+ ++W +D+GR           +  E L   Q +   KTL+L  VHDH      E  ++ IL D++ IW  V K  D   A+LSE FD+++  LPHPRYR EEYE ++  +R+RFL      +   L   YSK +  ESF +   V+W+E+   D      V+   +PS+ ELLAT+Q +  + + L     K   W+    RG+++  FG     LY   ++N+D +T P++   +R +K   L +LL   +  L ++Q+A LQQQGL KFK ML+  V       E  ++ A R +++WF + A ++VVP +     Y     E  + L E A+K+  SP   +QAM++LE  A +   K         L + +R  G G LQ  A+Y  GP      L NDRD+ +   +  +  L RIQP + FD+D+
Sbjct:   58 EEWPSQASEGISAEEAREFAVISAIGVKGCGKTTFFNHLFGTHLQVSSPLKRSEQEKGTKGAMMAVGQLSGSRHLLLIDTEGTDGRTSQAANNKRLERIVTLTVAVSDVILYHVWLADLGRFEAAGYGVFYTVLGEHLKIFQRDHPSKTLILFVVHDHDDGSTLEHLKKLILTDMEHIWDNVEKPNDYKTAKLSEFFDIQVVSLPHPRYRREEYEGSVAAIRDRFLGHFRRSEDYFLKREYSKELPLESFATYAEVVWSELTRSDAESGSHVISSGIPSQRELLATYQCDLSYETQLQNAMEKCQRWQNDTSRGKLIDKFGHKASSLYTEAMDNYDTSTAPYSSFQVRAQKRHSLGNLLQNQLKSLFQKQIALLQQQGLNKFKDMLLSAVAANGSISEYDQHVAMRRVDDWFIKKAEELVVPSL--RLHYRLYRLEMQNALNETASKFRDSPTVQMQAMQKLEKLASRPPPKQRGVVVGVGLNAAIRPSGYGNLQMLASYNKGPHSLNVSLVNDRDVAQQEGQSDI-ALFRIQPTLHFDIDI 596          
BLAST of NO13G01700 vs. NCBI_GenBank
Match: OSX69476.1 (hypothetical protein BU14_1471s0001 [Porphyra umbilicalis])

HSP 1 Score: 250.4 bits (638), Expect = 1.300e-62
Identity = 172/559 (30.77%), Postives = 268/559 (47.94%), Query Frame = 0
Query:   25 VSAAGPLEVIDAMGKLKGKEEVKQFVQKRLKATERAGPVIVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQGGVALCAAGDGVLMCVDYDAVG-TGAEEATTNGKILALTTRLADVIVLNLWSSDVGRNVPYNTLALQAIFQEQL---QAEGSPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWAGV-PKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFL-DLD----------------LLSARYSKRVDRESFPSTLSVLWNEIKGRDFVVLPSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYVGKEE---REDLENDAQRGLEEWFAEGAAKVVVPGVVGAGSYEKALSEFVDLLTEYAAKWPQSPAYNVQAMKQLEGGAKKKKGK-ASWGATFQLVSLLRTPGDGALQGFATYQAGPVQFLCGLQNDRDLPESRLEGKVPPLLRIQPKVAFDVDL 558
            ++     ++ID  G +    +++ F  + +   E    + V   G++G+GKSTLLN+LFDTDF V R           +A   A   +L+     A G  G   A   G++   +   ADV++ N+W++D+GR        L+ IF E +   Q +   +TLLL  V DH      E  R  +  DLD +WAG+  K    A A L   FD+++  LPH R+R EE+   +  LR  FL  +D                LL A YSK V  ++  +   V+W+E+       LPS+ EL+A ++ +    +A+      +  W   V+RGR V GFG     L +S ++ FD AT   A SP R +K  EL   L   +  L  +Q+ +LQ   L K+K +L+  V        E+++  A R ++EWF+  A +++VP +    S+  +  E  ++L++Y  K+  SP   +QAM++LE  A +   K  +      L   +R  G G +Q    Y  GP      + ND D  E   +GKV P  R+QP + FD+DL
Sbjct:  190 ITTPAVFQLIDGRGDM--SPDMEAFATQHVVGKEDGDLITVAILGARGTGKSTLLNRLFDTDFEVSRPFAGRGTTGAVLAASPAAPAILLLDSQGADGRDGDASADLVGRVATFSLAFADVLLFNVWAADLGRFEAAGYGLLRTIFCEFIKVFQPDEGRRTLLLFVVRDHDDGSSVESLRTLLRTDLDGLWAGIEDKPAAAATAPLDAFFDLDVVALPHIRHRAEEFNEGVAALRAHFLASVDGXXXXXXXXXXXXXEPLLKAEYSKAVPADALGTYAEVVWSELAKDRAAALPSKTELVAAYRCDLASDAAMHVAAPTIGRWTTDVDRGRGVPGFGTKAAMLLSSAMDKFDSATLAHAGSPARTKKRTELHDTLAGRLRALFHKQILSLQNAALTKYKELLLSAVSXXXXXVTEEVQQGALRRVDEWFSRKAEELLVPSL--RMSFRPSRLEVHNVLSDYTVKFKDSPTVQLQAMRRLERQASRPPSKPRNLSVGLGLTGAVRPRGYGNVQLVTGYSRGPHVVNMTVCNDADAAEQEGQGKV-PFFRLQPTLNFDIDL 743          
BLAST of NO13G01700 vs. NCBI_GenBank
Match: XP_005538016.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM81980.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 207.6 bits (527), Expect = 9.900e-50
Identity = 171/580 (29.48%), Postives = 255/580 (43.97%), Query Frame = 0
Query:   64 IVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQGGVALCAAGDGV--LMCVDYDAV-------------------------------------------GTGAEEATTN------GKILALTTRLADVIVLNLWSSDVGRNVPYNTLAL-QAIFQEQLQ---AEGSPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWA-GVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFLD-----------------------LDLLSARYSKRVDRESFPSTLSVLWNEIKGRDFVVLPSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPF---AVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYVGKEEREDLENDAQ---RGLEEWFAEGAAKVVVPGVVGAGSYEKALSEFVDLLTEYAAKWPQSPAYNVQAMKQLEGGAKKKKGKASWGAT-FQLVSLLRTPGDGALQGFATYQAGPVQFLCGLQNDRDLPESRLEGKVPPLLRIQPKVAFDVDL 558
            +V S G +GSGKS LLN LF T F  GR+    AR   G     AG     L+ +D + +                                           G GA E           ++  L T ++DV+++N+W +D+GR      + L + IF E L+    E   ++ +L  VHDH      E     I +DL+++WA  V K  +   A + + FD+E+  LPH RYR E Y  AI+ LR+RFL                         +LL+ RYSK +  E F + + ++W E+       LP   EL+A H+    +   L +   ++S W   V+ G++V GFG   ++L  +  E +D  T      + S +R RK  EL S L   I  L  RQ+  LQ Q + +F+  ++  +        E + Q   R ++E+F   A +++VP +    SY  + ++  + L E A K+  SP   +QAM ++E  A     K       F L + LR  G G  Q  A+   GP  F   + ND DL E    GKV PL R QP V FD+DL
Sbjct:   62 VVTSLGPRGSGKSALLNDLFGTRFATGRTFARHARGTRGCFCSVAGPQAPWLLLLDSEGIDGRETEETAELEDAEAEALLVEAESRARLTGRRGDSANAADHAGAGARERALQLTVPRAIRVAMLATTISDVMLVNVWYADIGRAEASGYVPLIRTIFSEHLKLFTKESPARSKILFIVHDHDDGSPLEAIAAIIERDLEAVWATQVEKPVEYRDARIGDHFDIEVISLPHRRYRAEAYNKAIDALRSRFLTGRGATGAVLWPQSSSSADAAEIYQNLLAPRYSKELPVEGFATYVDMVWRELIEPKEGGLPDYAELVAAHRCGVVYDRLLRSALEQISKWYNQVDSGKLVDGFGSKAQELLTTTGEKYDSETSALTSSSASLVRNRKRHELVSTLQNHIRALFNRQIQLLQNQTMTRFRDQMLALIADRSGMVSEFECQFLVRRMDEFFNRKAEELLVPSM--RLSYRSSRTDLQNTLLEAANKYRDSPTAQLQAMTRMEKRAMAPPSKQRGVVIGFGLNTALRPRGYGNFQLIASTSRGPHTFNASICNDADLAEQEGHGKV-PLFRWQPTVHFDIDL 638          
BLAST of NO13G01700 vs. NCBI_GenBank
Match: CEM08180.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 193.0 bits (489), Expect = 2.500e-45
Identity = 153/571 (26.80%), Postives = 263/571 (46.06%), Query Frame = 0
Query:   23 GLVSAAGPLEVIDAMGKLKGKEEVKQFVQKRLKATERAGPV-IVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQGGVALCAAGDGVLMCVDYDA---VGTGAEEATTNGKILALTTRLADVIVLNLWSSDV--GRNVP--YNTLALQAIFQE-----------QLQAEGSPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWAGVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFLDLDLLSARYSKRVDRESFPSTLSVLWNEIKGRDFVVL--PSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYVGKEEREDLENDAQ--RGLEEWFAEGAAKVVVPGVVG--AGSYEKALSEFVDLLTEYAAKWPQSPAYNVQAMKQLEGGAK-----------KKKGKASWGATFQLVSLLRTPGDGALQGFATYQAGPVQFLCGLQNDRDLPESRLEGKVPPLLRIQPKVAFDVDL 558
            G   +  P+E++ + GK   + E+ QF+ +  +   + G + ++ + G  G  K   LN+L  +D    + L  A       A       V++ V   A     T  E+  T G+++AL   L  V VL +W S+V  G  +P   ++L L+ + +E           + +   +    ++ AV    G        +A  + +  +++ + K        ++ L D+    LP  +YRP+EY+ A+ +LR + +      A+ S+ V     P T+  +W  ++ R  V    PS   L A+    +     +   +  LS W+  V+RG V   FG     L  S L+ +D  TQ   +S +R R+  E++S L   + DL  RQLA LQ++ LK  +  L+  +  +   +   +A   R +E  F E ++ ++V  +      + ++A    +D L  YA K+P+S    VQA  ++E   +             K + ++G    L S++R  G+G LQGFA+Y AGP   + G  NDRD PE+   G+ PP LR+QPK+  D+DL
Sbjct:   37 GFRGSKQPIELLSSTGKAASEREITQFLGELARQDTKEGNLPVIAAIGPGGRRKRAFLNQLCGSDLDASKFLPTAPSASLSGAPEIGNTAVVLDVSTLASLPADTDEEDKLTTGQMMALACPLWGVCVLPVWQSEVVDGGGLPSSVSSLLLKVVREEVRGRRGAGGGGRSEGRKAGPLKIIFAVQGGDGTLSSSDATKAFTKGMSDLFSALEKPPG-LQGGMAGLVDVTAVVLPSSKYRPQEYQKALVELR-QVVKGAADKAKSSRGVRGSQLPGTVGGMWAAVRERLDVSTDSPSVAVLAASAHATSTADLLMDAAKVTLSQWKRRVDRGTVTDDFGHRAHTLITSTLDQYDRNTQMDGLSSMRQRRRDEIRSTLEADVRDLFNRQLALLQRRSLKDLREKLVAALTPQGSVEANQEAAALRQVEFTFDESSSDLLVSCMADELKPAIDEAKKTLMDRLRAYAGKFPESNEAKVQARLRMEERMRXXXXXXXXXXXXAKRERAFGMRLALASMVRQDGNGNLQGFASYDAGPFSMIMGYANDRDTPEAMQNGEKPPFLRLQPKIHLDIDL 605          
BLAST of NO13G01700 vs. NCBI_GenBank
Match: KIO29400.1 (hypothetical protein M407DRAFT_169746 [Tulasnella calospora MUT 4182])

HSP 1 Score: 156.0 bits (393), Expect = 3.400e-34
Identity = 120/419 (28.64%), Postives = 186/419 (44.39%), Query Frame = 0
Query:   64 IVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQ--GGVALCAAGDGVLMCVDYDAVG--TGAEEATTNGKILALTTRLADVIVLNLWSSDVGRNVPYNTLALQAIFQEQLQAEG-----SPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWAGVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFLDLD----LLSARYSKRVDRESFPSTLSVLWNEIKGRDFVVLPSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYV---GKEEREDLENDAQRGLEEWFAEGAAKVVVPGVVGAGSYEKALSEFVDLLTEYAAKWPQ 467
            +V   GS+ +GKSTLLN+LF T F V   +    R Q   G+ +C A +  LM +D +        E+     K    +    +V+++N+W   VG     N   L+ +F+  LQ  G     SP+TLLL  + DH G       R  ++ DL  IW  + K E   +A+L + FDM    L H   RP+++E  +  LR RF D      +    Y KR+  +     +  +W +++    + LP++ ELLA  + +   + AL     +  S+R  VE GR+V   G        S L  FD A   +    +  RK  +L + L   +S L   QL NL +  L  FK  L+  V   G  +   +  DA +  EE+F  GA +      +G    E    + +D    Y  ++ Q
Sbjct:   47 LVAIFGSQSTGKSTLLNRLFGTTFDV---MNETERRQTTKGIWMCGAKNMPLMVMDVEGTDGRERGEDQDFERKSALFSLASTEVLLVNMWEHQVGLYHGANMALLKTVFEVNLQLFGKRDATSPRTLLLFVIRDHVGATPLSNLRATLIADLSKIWDSIAKPEGLDHAKLDDYFDMSFVALAHKILRPDQFEEDVLKLRERFFDRSREDYVFKPVYHKRIPADGVAHYMEGIWEQVQSNKDLDLPTQQELLAQFRCDEIAAGALEEFNIQARSFRKPVEGGRIVEELGRTMSTWKQSALTRFDTAASRYH-KGVYTRKRADLLAQLNTTLSPLFLGQLKNLHRSALTTFKKDLVDGVRTGGDYDFGTIVQDAGKKAEEFFESGAREAAGLAPLGIKEEEGEEKQPIDAEWSYTDEFEQ 461          
BLAST of NO13G01700 vs. NCBI_GenBank
Match: OON09440.1 (hypothetical protein BSLG_01519, partial [Batrachochytrium salamandrivorans])

HSP 1 Score: 150.2 bits (378), Expect = 1.900e-32
Identity = 110/412 (26.70%), Postives = 188/412 (45.63%), Query Frame = 0
Query:   64 IVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQGGVALCAAGDGVLMCVDYDAVG--TGAEEATTNGKILALTTRLADVIVLNLWSSDVGRNVPYNTLALQAIFQEQL---QAEGSPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWAGVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFLDLD----LLSARYSKRVDRESFPSTLSVLWNEIKGRDFVVLPSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYVGKEEREDLENDAQRGL---EEWFAEGAAKVVVPGVVGAGSYEKALSEFVDLLTEYAAK 464
            IV   GS+ SGKSTLLN+LF T F V        +   G+ +C A    ++ +D +        E+     K    +  +++V+++N+W   VG     N   L+ +F+  L   QA GSPKT +   + D        +    ++ DL  IW G+ K + +  A++++LFD E A +PH  Y  E++E A+E+LR RF +      +    Y KR+  + FP     +W++I     + LP++ ELLA  + +    +        +   R  ++ G+VV   G   ++L    L  FD     +  S  +  K    +  +   +S L  +QL NL ++G+K F   L   +   E  D  N  +      E +F  GA   ++P  +   ++++ LS F+  L +   K
Sbjct:   54 IVAVFGSQSSGKSTLLNRLFKTQFDVMEE-SERRQTTKGIWICKAHASNILVMDVEGTDGRERGEDQDFERKSALFSMSVSEVLIVNMWEQSVGLYNGANMGLLKTVFEVNLQLFQAPGSPKTCIFFVLRDFTNRTPLAKLAATLINDLKRIWDGLSKPQGRESAQITDLFDFEYAGVPHKIYATEQFEVAVEELRERFYEKKSQHYIFKTGYHKRIPVDGFPHFAGAVWDQISKNRDLDLPTQQELLAQFRCDEISKTIYERFSVDVKPLRQLLDVGKVVENLGHDTQQLTLVALAAFDKDAIRYNASVYK-SKRAAFEEQMYTALSVLFVQQLRNLHKRGIKMFNDSLQTRINTGE-SDFSNKIKLSFNEAESYFHNGAQAALIP--LAEWTFDEQLSLFIQELGDECVK 460          
BLAST of NO13G01700 vs. NCBI_GenBank
Match: OON09441.1 (hypothetical protein, variant, partial [Batrachochytrium salamandrivorans])

HSP 1 Score: 150.2 bits (378), Expect = 1.900e-32
Identity = 110/412 (26.70%), Postives = 188/412 (45.63%), Query Frame = 0
Query:   64 IVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQGGVALCAAGDGVLMCVDYDAVG--TGAEEATTNGKILALTTRLADVIVLNLWSSDVGRNVPYNTLALQAIFQEQL---QAEGSPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWAGVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFLDLD----LLSARYSKRVDRESFPSTLSVLWNEIKGRDFVVLPSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYVGKEEREDLENDAQRGL---EEWFAEGAAKVVVPGVVGAGSYEKALSEFVDLLTEYAAK 464
            IV   GS+ SGKSTLLN+LF T F V        +   G+ +C A    ++ +D +        E+     K    +  +++V+++N+W   VG     N   L+ +F+  L   QA GSPKT +   + D        +    ++ DL  IW G+ K + +  A++++LFD E A +PH  Y  E++E A+E+LR RF +      +    Y KR+  + FP     +W++I     + LP++ ELLA  + +    +        +   R  ++ G+VV   G   ++L    L  FD     +  S  +  K    +  +   +S L  +QL NL ++G+K F   L   +   E  D  N  +      E +F  GA   ++P  +   ++++ LS F+  L +   K
Sbjct:   54 IVAVFGSQSSGKSTLLNRLFKTQFDVMEE-SERRQTTKGIWICKAHASNILVMDVEGTDGRERGEDQDFERKSALFSMSVSEVLIVNMWEQSVGLYNGANMGLLKTVFEVNLQLFQAPGSPKTCIFFVLRDFTNRTPLAKLAATLINDLKRIWDGLSKPQGRESAQITDLFDFEYAGVPHKIYATEQFEVAVEELRERFYEKKSQHYIFKTGYHKRIPVDGFPHFAGAVWDQISKNRDLDLPTQQELLAQFRCDEISKTIYERFSVDVKPLRQLLDVGKVVENLGHDTQQLTLVALAAFDKDAIRYNASVYK-SKRAAFEEQMYTALSVLFVQQLRNLHKRGIKMFNDSLQTRINTGE-SDFSNKIKLSFNEAESYFHNGAQAALIP--LAEWTFDEQLSLFIQELGDECVK 460          
BLAST of NO13G01700 vs. NCBI_GenBank
Match: KXS09730.1 (root hair defective 3 GTP-binding protein [Gonapodya prolifera JEL478])

HSP 1 Score: 148.3 bits (373), Expect = 7.200e-32
Identity = 112/378 (29.63%), Postives = 179/378 (47.35%), Query Frame = 0
Query:   69 GSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQ--GGVALCAAGDGVLMCVDYDAVG--TGAEEATTNGKILALTTRLADVIVLNLWSSDVGRNVPYNTLALQAIFQEQLQ---AEGSPKTLLLVAVHDHAGHQQDERTREAILQDLDSIWAGVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAIEDLRNRFLDLD----LLSARYSKRV-DRESFPSTLSVLWNEIKGRDFVVLPSRGELLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVLENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKFKGMLMGYVGKEEREDLEN--DAQRGLEEWFAEGA 433
            GS+ +GKSTLLNKLF T F V   +  A R Q   G+ L       L+ +D +        E+     +    +  +A+V+V+N+W   VG     N   L+ +F   +Q   A GSPKTLL+  + DH G    +  +  ++ DL+ IW G+ K      A L E FD++   LPH    PE +++A ++LR RFL+      L    Y K++   + FP    V+W +I     + LP++ +LLA ++ +   ++A      K + W   VE G+VV   G+         L  +D +   +  S  + RK  EL   L      L  +QL NL ++ L++FK  L   +     +  EN  +A+ G+ E F + +
Sbjct:   68 GSQSTGKSTLLNKLFGTGFAV---MDSAQRRQTTKGIWLSRPVSHPLLIMDVEGADGRERGEQQDFERRTALFSLAVAEVVVVNMWEHQVGLYQGANMGLLKTVFDVNVQLFAARGSPKTLLVFVIRDHLGVTPLDALKRTLMDDLERIWEGLNKPPAVGEAPLEEFFDLDFIGLPHKYNAPEAFDTACDNLRQRFLEPSTPGFLFKKTYHKKLPPADGFPHYAKVIWEKILTAKDLDLPTQQQLLAQYRCDEIAATARKEFGEKAADWTGKVEGGKVVETLGKDMGVTKTGSLATYDASASRYHPSVYQ-RKRLELVDALDAQCKVLYVKQLQNLAKRALQQFKQELQSRLAAARSDFSENLKEAENGVLEAFEKSS 441          
The following BLAST results are available for this feature:
BLAST of NO13G01700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21833.14.100e-24578.72GTP-binding protein [Nannochloropsis gaditana][more]
CBN75362.11.400e-6732.38RHD3a, RHD3/Sey1 family GTPase involved in the ER-... [more]
XP_005704435.11.900e-6432.10GTP-binding protein [Galdieria sulphuraria] >EME27... [more]
OSX69476.11.300e-6230.77hypothetical protein BU14_1471s0001 [Porphyra umbi... [more]
XP_005538016.19.900e-5029.48hypothetical protein, conserved [Cyanidioschyzon m... [more]
CEM08180.12.500e-4526.80unnamed protein product [Vitrella brassicaformis C... [more]
KIO29400.13.400e-3428.64hypothetical protein M407DRAFT_169746 [Tulasnella ... [more]
OON09440.11.900e-3226.70hypothetical protein BSLG_01519, partial [Batracho... [more]
OON09441.11.900e-3226.70hypothetical protein, variant, partial [Batrachoch... [more]
KXS09730.17.200e-3229.63root hair defective 3 GTP-binding protein [Gonapod... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001715NSK001715Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01700.1NO13G01700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596494gene_6836Nannochloropsis oceanica (N. oceanica CCMP1779)gene
RHD3agene8590Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01700.1NO13G01700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01700 ID=NO13G01700|Name=NO13G01700|organism=Nannochloropsis oceanica|type=gene|length=2465bp
CACAGGGTCGGTTGGGCTGGCCTTGGACGACGACATACGGACAAACGACC
GGCTGCACCTAGAGGCTGCGTAACCATCATCTGAAGCAACAAGTAGCAAG
CACTAAGTGGGATAGCAGGCAACACACGCAGATACAGAGCGCTAGCATGA
GTCAACCACAAAAAGGAGGGCTATTGTGGCCCGTGGTGGTGTTGTTGGTG
GTGGGGATGGTGGGGCTAGTGAGCGCAGCGGGGCCGTTAGAAGTAATCGA
TGCGATGGGCAAACTCAAGGGCAAAGAGGAGGTGAAACAGTTCGTGCAAA
AGCGACTTAAGGCCACAGAGCGAGgtgagtgagacatgatggtgctaggg
tgagacaggggaagtagtaggaggcgaggacagaaacatgagtggtggtg
catgatgcgctgatacagcacccttgcttggcctcctgtgatggtgccat
ttcacctctacacacgtgcgacccacagcccgtattgtcttttcatctgt
tttgtacaacgctagattgtatgcttcctgtccagtctccctcctcctgt
gtcctccagtttgcgcacccatcgatctcacacgcaccctctcgcgcttt
ctcccttcctccccgttttgcagCCGGCCCGGTCATTGTCGGCAGTGCGG
GGAGCAAAGGCTCGGGAAAAAGCACCCTGCTCAACAAGCTCTTTGATACT
GATTTCGGAGTCGGTCGCTCTCTTGGTCCCGCCGCCCGGCCACAGGGAGG
GGTGGCTTTATGCGCTGCGGGTGATGGGGTATTAATGTGTGTCGATTATG
ATGCGGTAGGCACGGGCGCGGAGGAGGCCACGACGAATGGCAAGATTCTG
GCCTTGACGACGAGGCTCGCTGATGTGATTGTGCTGAATTTGTGGAGTTC
GGATGTAGGGCGGAATGTGCCGTATAACACGCTGGCGTTGCAGgtaaagg
gagggggggagatgggaaaggtagagagcatacgggatacaccgatctct
tgtgtttttttttcatccctttgccactctctcgcccgtccatatttcag
tctgtcaccattgctctgcattgtactcatcggtcactctcccttattcc
ttttctccctccttcactccctccctcagGCTATCTTCCAAGAGCAACTC
CAAGCCGAAGGTTCGCCCAAGACCCTTCTCCTCGTCGCTGTGCACGACCA
TGCGGGGCATCAACAGGATGAAAGGACTCGGGAGGCGATTTTGCAGGATC
TTGACTCGATTTGGGCTGGAGTTCCCAAGAGTGAGGACAAGGCATATGCA
GAGCTAAGTGAGCTCTTCGATATGGAGATTGCTTTCTTGCCTCACCCGCG
TTACAGACCCGAGGAATACGAGAGgtaggttgaataatttcacaacaaca
aatgacgatcagtatttgccctcgtttcttaaattttctttgaggtgtgg
gacttctcctcttttctcatccgcctctcccttcttccctttctccctcc
ctacctccctacccacagTGCCATTGAAGACCTGCGCAACCGTTTCTTGG
ACTTGGACCTCCTGTCCGCCCGTTACTCCAAGCGCGTAGACCGAGAAAGC
TTTCCCTCAACCCTTTCGGTACTTTGGAACGAGATCAAGGGGAGGGATTT
CGTGGTCCTGCCTTCCCGAGGTGAGCTTCTGGCAACCCACCAAATCGAGA
CTCAGTTTTCCTCTGCTTTGGCCACCGTAGAGAGCAAGCTGTCCTCATGG
CGGGCAGCGGTGGAGAGGGGAAGGGTGGTGAGTGGCTTTGGAGAGGTGGG
AGAGAAGCTGTACGCGAGTGTGCTCGAGAACTTTGATGGGGCCACACAGC
CTTTTGCTGTTTCCCCTCTAAGGGTGAGGAAGCACAAGGAGCTGCAGTCA
TTGTTGACGAGGGGGATTAGTGACTTGGTGCGGCGACAGCTGGCGAATTT
GCAGCAGCAGGGGCTGAAGAAATTCAAGGGGATGTTGATGGGGTATGTGG
GGAAAGAGGAGCGGGAGGATTTGGAGAATGACGCGCAACGGGGGTTGGAA
GAGTGGTTTGCAGAGGGGGCGGCGAAGGTGGTTGTCCCGGGCGTTGTGGG
CGCGGGGAGCTATGAGAAGGCACTGTCGGAGTTTGTGGATCTATTGACGG
AGTATGCCGCTAAATGGCCACAATCGCCGGCATACAACGTCCAGGCCATG
AAACAATTGGAGGGTGGGGCCAAGAAAAAGAAAGGGAAGGCGTCGTGGGG
TGCCACGTTTCAGCTCGTGTCATTGTTAAGGACCCCGGGGGATGGGGCTC
TGCAAGGATTTGCGACCTACCAGGCCGGACCGGTTCAATTTTTGTGTGGG
TTGCAGAATGATCGGGATTTGCCAGAGTCAAGGTTGGAAGGGAAGGTGCC
GCCACTGCTGAGGATTCAGCCCAAGGTGGCGTTTGATGTGGATTTGTAAG
GCGGGGGGGGGGGGG
back to top

protein sequence of NO13G01700.1

>NO13G01700.1-protein ID=NO13G01700.1-protein|Name=NO13G01700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=558bp
MSQPQKGGLLWPVVVLLVVGMVGLVSAAGPLEVIDAMGKLKGKEEVKQFV
QKRLKATERAGPVIVGSAGSKGSGKSTLLNKLFDTDFGVGRSLGPAARPQ
GGVALCAAGDGVLMCVDYDAVGTGAEEATTNGKILALTTRLADVIVLNLW
SSDVGRNVPYNTLALQAIFQEQLQAEGSPKTLLLVAVHDHAGHQQDERTR
EAILQDLDSIWAGVPKSEDKAYAELSELFDMEIAFLPHPRYRPEEYESAI
EDLRNRFLDLDLLSARYSKRVDRESFPSTLSVLWNEIKGRDFVVLPSRGE
LLATHQIETQFSSALATVESKLSSWRAAVERGRVVSGFGEVGEKLYASVL
ENFDGATQPFAVSPLRVRKHKELQSLLTRGISDLVRRQLANLQQQGLKKF
KGMLMGYVGKEEREDLENDAQRGLEEWFAEGAAKVVVPGVVGAGSYEKAL
SEFVDLLTEYAAKWPQSPAYNVQAMKQLEGGAKKKKGKASWGATFQLVSL
LRTPGDGALQGFATYQAGPVQFLCGLQNDRDLPESRLEGKVPPLLRIQPK
VAFDVDL*
back to top
Synonyms
Publications