NO13G01670, NO13G01670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01670 vs. NCBI_GenBank
Match: EWM21846.1 (snf7 family protein [Nannochloropsis gaditana]) HSP 1 Score: 253.8 bits (647), Expect = 6.100e-64 Identity = 138/176 (78.41%), Postives = 157/176 (89.20%), Query Frame = 0 Query: 13 MGGLFSRH--HGHGRKPK--VLVTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFEELQAL 185 MGGLFSRH H G+ PK V +TDHDRAVLDLK+AKD+LKRYQ+KM SE +RLTE+AKELV GRKDRALLVLKMRRLREDEQ KA QL+N+EQLITQIEWE +Q+QVFDALKSGNQAL+AIH+I+SLEEV+KLMADTADSI YEQE+SRLLS +LSAGAEEEV+ EF+ELQAL Sbjct: 1 MGGLFSRHGRHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQAL 176
BLAST of NO13G01670 vs. NCBI_GenBank
Match: CBJ26544.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 149.8 bits (377), Expect = 1.200e-32 Identity = 89/185 (48.11%), Postives = 129/185 (69.73%), Query Frame = 0 Query: 13 MGGLFSRHHGHGRKPKVLVTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFEELQALTGLVPDAAAPFPV 198 MG L SR ++ + VTD DRAVLDLK ++D+L RYQ K+ E +L QA +V RKDRALL+LK+++L++D+ KA SQL+++ Q++ I+WETQQ+QVF+ALK GN AL+ +HE M L++VE+LMADTA+SI E+E+S+ + GS + EE+++ E EL++ AAP PV Sbjct: 1 MGNLMSRKK---KRERDHVTDQDRAVLDLKNSRDRLTRYQKKLDLECAKLQAQAAAMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFNALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELES-------EAAPEPV 175
BLAST of NO13G01670 vs. NCBI_GenBank
Match: OQR99334.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial precursor [Thraustotheca clavata]) HSP 1 Score: 134.8 bits (338), Expect = 4.100e-28 Identity = 73/168 (43.45%), Postives = 115/168 (68.45%), Query Frame = 0 Query: 16 LFSRHHGHGRKPKVLVTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFEELQA 184 L +R + K K V+D D+AVL+LK ++D+LK+YQ ++ +S L +A+EL+A KDRALL LKMR+ + + +A++ LMN+ +I +EWE+QQ+Q+F LK+GN LDAIH+ M++E VE LM +T ++ + E+SR+L G+LS E+ V+ E E++A Sbjct: 673 LAARRAANVAKAKNQVSDKDKAVLELKASRDRLKKYQKQLEKDSEALQNKARELIANKHKDRALLCLKMRKFKLQQLEQADNHLMNVHTMIDSVEWESQQLQIFQGLKAGNAVLDAIHKEMTVEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEA 840
BLAST of NO13G01670 vs. NCBI_GenBank
Match: XP_012197271.1 (hypothetical protein SPRG_03304 [Saprolegnia parasitica CBS 223.65] >KDO32084.1 hypothetical protein SPRG_03304 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 133.3 bits (334), Expect = 1.200e-27 Identity = 83/216 (38.43%), Postives = 132/216 (61.11%), Query Frame = 0 Query: 13 MGGLFS------------RHHGHGRKPKVLVTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFEELQALT-----GLVPDAAAPFPVTSAAPAVTDAEAPP 212 MGG+FS RH + K + V+ D+A+L+LK ++D+LK+YQ + ES L +A++L+A +KDRA+L LKMR+ + + +A++ L+N+ Q+I +EWE+QQ+Q+F+ LK+GN LDAIH+ M++E VE LM +T ++ + E+SR+L G+LS E+ V+ E E++A + PD P+ A A D APP Sbjct: 1 MGGVFSKKTPAPANAAAERHAANRAKAQQQVSSKDKAMLELKASRDRLKKYQKALEVESATLESKARQLLAKKQKDRAMLCLKMRKFKLQQIEQADTHLLNVHQMIGSVEWESQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEAAAFEAQLPIAPDDVLVAPLPEAPTA--DVVAPP 214
BLAST of NO13G01670 vs. NCBI_GenBank
Match: XP_009838459.1 (hypothetical protein H257_12820 [Aphanomyces astaci] >ETV72016.1 hypothetical protein H257_12820 [Aphanomyces astaci]) HSP 1 Score: 132.9 bits (333), Expect = 1.600e-27 Identity = 82/218 (37.61%), Postives = 135/218 (61.93%), Query Frame = 0 Query: 15 GLFSRHHGHGRKPKVLVTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFE-----ELQALTGLVPDAAAPFPVTSAAPAVTDAEAPPMAAEEKEAVAGKPSKA 228 G +R + ++ + V+ D+AVL+LK ++D+LK+YQ + ES +LTE+AK+L+ ++DRA L L++R+ ++ + +A++ LMN+ Q++ +EWETQQ+Q+F+ LK+GN LDAIH+ M++E VE LM DT ++ E+ RL+ GSL+ +E ++ E E +AL L+P A A V + V E +A K A + K +KA Sbjct: 15 GPTARQTANRQRAQNQVSSKDKAVLELKASRDRLKKYQSHLEHESAQLTEKAKQLLEKKQRDRAKLCLQLRKFKQQQIEQADTHLMNVLQMVDSVEWETQQLQIFEGLKAGNSVLDAIHKEMTVEAVEDLMLDTQEAQARADEIGRLIGGSLTVDDDESILEELAAIEALEAEALDALLPVAPAHDAVMAEPAEVVTPEQVQVAVPPKPAASAKKTKA 232
BLAST of NO13G01670 vs. NCBI_GenBank
Match: XP_008618432.1 (hypothetical protein SDRG_14103 [Saprolegnia diclina VS20] >EQC28146.1 hypothetical protein SDRG_14103 [Saprolegnia diclina VS20]) HSP 1 Score: 132.1 bits (331), Expect = 2.700e-27 Identity = 83/225 (36.89%), Postives = 135/225 (60.00%), Query Frame = 0 Query: 13 MGGLFS-------------RHHGHGRKPKVLVTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFEELQALTGLVPDAAAPFP----VTSAAPAVTDAEAPPMAAEEKEAV 221 MGG+FS RH + K + V+ D+A+L+LK ++D+LK+YQ + +ES L +A++L+A +KDRA+L LKMR+ + + +A++ L+N+ Q+I +EWE+QQ+Q+F+ LK+GN LDAIH+ M++E VE LM +T ++ + E+SR+L G+LS E+ V+ E E++A +A P + +A P V A AA + V Sbjct: 1 MGGVFSKKTPAPATNAAAERHAANRAKAQQQVSSKDKAMLELKASRDRLKKYQKALEAESATLESKARQLLAKKQKDRAMLCLKMRKFKLQQIEQADTHLLNVHQMIGSVEWESQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEAAETAALEAQLPIAPDDVLVAALPEVPAASVVAPAARRAKPV 225
BLAST of NO13G01670 vs. NCBI_GenBank
Match: XP_004333037.1 (charged multivesicular body protein, putative [Acanthamoeba castellanii str. Neff] >ELR11024.1 charged multivesicular body protein, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 129.8 bits (325), Expect = 1.300e-26 Identity = 90/220 (40.91%), Postives = 130/220 (59.09%), Query Frame = 0 Query: 13 MGGLFSRHHGHGRKPKVLVTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFEEL--QALTGLVPDAAAPFPVTSAAPAVTDAEAPPMAAEEKEAVAGKPSKAPQA 231 MGGLFS K V+ HD+AVLDLK+ +DKL +YQ KMR+ + TE A+EL+ G++ +ALL LK +R +E K+E+QL N++++I +E+ + +VFD LK+GN+ L I MSL VE+LMADT ++I ++QE+ +L+G L+ EE ++ E +EL QA VP V + P TD P A K V K +AP A Sbjct: 1 MGGLFS---SSATKKAPRVSSHDKAVLDLKVQRDKLTQYQKKMRAVVEKETEMARELLRKGQRPKALLALKKKRFQEQLLAKSEAQLSNLQEMIDSVEFAQMEKRVFDGLKAGNEVLKEIQAEMSLNAVEELMADTQEAIAHQQEIENILAGKLTDEDEEAILAELDELVQQAEQEGVPQMP---EVPAGEPTATD---PQKATAAKTKVKAKRQEAPLA 211
BLAST of NO13G01670 vs. NCBI_GenBank
Match: OQR94649.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial precursor [Achlya hypogyna]) HSP 1 Score: 129.0 bits (323), Expect = 2.300e-26 Identity = 79/216 (36.57%), Postives = 134/216 (62.04%), Query Frame = 0 Query: 18 SRHHGHGRKPKVLVTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFEELQALTGLVPDAAAPFPVTSAAPAVTDAEAPPMAAEE-KEAVAGKPSKAPQAGT 233 +RH + K + V+ D+A+L+LK ++D+LK+YQ ++ +ES L A++L+A +KDRA+L LKMR+ + + +A++ L+N+ +I +EWETQQ+Q+F+ LK+GN LDAIH+ M++E VE LM +T ++ + E+SR+L G+L+ E+ V+ E E++ G A P+ +T EAP A E+ K+++ P + T Sbjct: 17 ARHAANRAKAQNQVSAKDKAILELKASRDRLKKYQKQLEAESTTLEANARQLLAKKQKDRAMLCLKMRKFKLQQIAQADTHLLNVHTMIDSVEWETQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRMLGGALTVEDEDAVLAELAEIE--RGEAAALEAQLPIAPDDMLLTLPEAPTAAPEKPKKSLVSAQILTPHSET 230
BLAST of NO13G01670 vs. NCBI_GenBank
Match: GAX97285.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial precursor [Pythium insidiosum]) HSP 1 Score: 126.3 bits (316), Expect = 1.500e-25 Identity = 76/206 (36.89%), Postives = 130/206 (63.11%), Query Frame = 0 Query: 31 VTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFE-----ELQALTGLVPDA-AAPFPVTSAAPAVTDAEAPPMAAEEKEAVAGKPSKAPQA 231 VT D+A+L+LK A+D+LK+YQ ++ ++ +L + AK+L+ ++DRA L LK+++ +E + +A+ L+ + +++ +EWE+QQ++VF+ LK+GN LDAIH+ MS+E V+ LM +T ++ E E+E+SRL+ G+L+ E+ V+ E E +AL +P+A +AP A A+APP P KAP++ Sbjct: 353 VTSKDKAILELKNARDRLKKYQARLDVDAQQLQDSAKQLLQAEKRDRAKLALKVKKFKEQQIKQADGHLLTVLEMLDTVEWESQQLKVFEGLKAGNSVLDAIHKEMSVEAVQNLMLETEEAQETEREISRLIGGNLTVEDEDAVLAELADIERMEAEALAAALPEAPSAPIETADVVVATEPAQAPP------------PKKAPRS 546
BLAST of NO13G01670 vs. NCBI_GenBank
Match: XP_007248811.2 (charged multivesicular body protein 6 [Astyanax mexicanus]) HSP 1 Score: 125.2 bits (313), Expect = 3.300e-25 Identity = 70/169 (41.42%), Postives = 114/169 (67.46%), Query Frame = 0 Query: 13 MGGLFSRHHGHGRKPKVLVTDHDRAVLDLKIAKDKLKRYQIKMRSESIRLTEQAKELVAVGRKDRALLVLKMRRLREDEQVKAESQLMNMEQLITQIEWETQQMQVFDALKSGNQALDAIHEIMSLEEVEKLMADTADSIEYEQEVSRLLSGSLSAGAEEEVMMEFEEL 182 MG +F G+K + VT+ DRAVL LK +DKLK+YQ K+ + + + AK+L+ G+KD+ALL+LK +R +E K E+Q+ N+E+++ IE+ +++V + LK GN L +HE+MSLEEVE++M +T D+IEY++++ +L+GSL+ E+ V+ E E + Sbjct: 1 MGNIF------GKKKRTRVTEQDRAVLQLKQQRDKLKQYQKKVTLQMEKERQLAKQLLKDGKKDKALLLLKKKRFQEQLLDKTENQISNLERMVQDIEFAQIEIKVIEGLKVGNDCLKKMHEVMSLEEVERIMDETHDAIEYQKQIDDILAGSLTQEDEDAVLAELEAI 163 The following BLAST results are available for this feature:
BLAST of NO13G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01670 ID=NO13G01670|Name=NO13G01670|organism=Nannochloropsis oceanica|type=gene|length=937bpback to top protein sequence of NO13G01670.1 >NO13G01670.1-protein ID=NO13G01670.1-protein|Name=NO13G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=280bpback to top Synonyms
Publications
|