NO13G01490, NO13G01490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01490 vs. NCBI_GenBank
Match: WP_009633165.1 (iron-sulfur cluster assembly accessory protein [Synechocystis sp. PCC 7509]) HSP 1 Score: 135.2 bits (339), Expect = 2.200e-28 Identity = 67/118 (56.78%), Postives = 88/118 (74.58%), Query Frame = 0 Query: 80 TVEVAERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 TV+ A+R I +S +AL+HL+ L+ +QG D LYLR+GVR GGCSGMSY++D + ++ E+D + YD F V DPKSLLYL+GL LD+ + LIGGGF F NPNA ++CGCG SFGV Sbjct: 5 TVQSAQRGIQLSQAALQHLQALQQQQGKD-LYLRVGVRQGGCSGMSYMMDFEAEANIGEKDQVFDYD--GFKIVSDPKSLLYLYGLMLDYSNALIGGGFQFTNPNAAQTCGCGKSFGV 119
BLAST of NO13G01490 vs. NCBI_GenBank
Match: GAX29132.1 (iron-sulfur cluster assembly protein [Fistulifera solaris]) HSP 1 Score: 133.7 bits (335), Expect = 6.500e-28 Identity = 71/150 (47.33%), Postives = 96/150 (64.00%), Query Frame = 0 Query: 55 VAKAIATPRTQRGKLFADVAEKNEGTVEV---AERVITVSDSALEHLKDLR---TKQGV-DHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 VA + P R L+AD + + + V+ + +A++ L++LR K V D L LRMGVRSGGCSGMSYV+D ++ + E+D ++ Y + CVVD KS+LYL+GL LD+ +LIGGGF F NPNA+ESCGCGSSFGV Sbjct: 19 VAWILPHPLAFRTTLYADTTQALPLVTDYEIPEDAVVMIKPAAMKRLRELRQTELKDPVNDTLILRMGVRSGGCSGMSYVMDFSSEDSIQEDDVVDEYADEKVKCVVDAKSMLYLYGLELDYSTELIGGGFKFFNPNAEESCGCGSSFGV 168
BLAST of NO13G01490 vs. NCBI_GenBank
Match: WP_106369094.1 (iron-sulfur cluster assembly accessory protein [Chlorogloea sp. CCALA 695] >PSB32289.1 iron-sulfur cluster assembly accessory protein [Chlorogloea sp. CCALA 695]) HSP 1 Score: 133.3 bits (334), Expect = 8.500e-28 Identity = 65/118 (55.08%), Postives = 88/118 (74.58%), Query Frame = 0 Query: 80 TVEVAERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 TV+ +R I +S +AL+HL+ L+ +QG + LYLR+GVR GGCSGMSY++D + +++E+D + YD F V DPKSLLYL+GL LD+ + LIGGGF F NPNA ++CGCG SFGV Sbjct: 5 TVQSGQRGIQLSQAALQHLQALQQQQG-NALYLRVGVRQGGCSGMSYMMDFEAESNISEKDQVFDYD--GFKIVSDPKSLLYLYGLMLDYSNALIGGGFQFTNPNAAQTCGCGKSFGV 119
BLAST of NO13G01490 vs. NCBI_GenBank
Match: WP_072622061.1 (iron-sulfur cluster assembly accessory protein [Spirulina major]) HSP 1 Score: 132.5 bits (332), Expect = 1.400e-27 Identity = 62/116 (53.45%), Postives = 88/116 (75.86%), Query Frame = 0 Query: 82 EVAERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 + ++ I +S++ALEHL+ LR++QG D L LR+GVR+GGCSGMSY +D E++ E+D E Y+ + F + DPKSLLY++G++LD+ + LIGGGF F NPNA ++CGCG SFGV Sbjct: 5 QTPQKGILLSETALEHLQQLRSQQGRD-LCLRVGVRNGGCSGMSYAMDFETAENIREDD--EVYNYNGFRIICDPKSLLYIYGMQLDYSNALIGGGFQFTNPNANQTCGCGKSFGV 117
BLAST of NO13G01490 vs. NCBI_GenBank
Match: WP_015194559.1 (iron-sulfur cluster assembly accessory protein [Stanieria cyanosphaera] >AFZ36897.1 iron-sulfur cluster assembly accessory protein [Stanieria cyanosphaera PCC 7437]) HSP 1 Score: 131.7 bits (330), Expect = 2.500e-27 Identity = 62/110 (56.36%), Postives = 80/110 (72.73%), Query Frame = 0 Query: 88 ITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 I ++D+AL+H+K LR +QG LYLR+GVR GGCSGMSY++D + V + D E +D F V DPKSLLYL+GL LD+ + +IGGGF F NPNA ++CGCG SFGV Sbjct: 12 IQLTDTALKHIKMLREQQGNKELYLRVGVRQGGCSGMSYMMDFEEPNQVRDND--EVFDYEGFKIVCDPKSLLYLYGLVLDYSNAMIGGGFQFTNPNAAQTCGCGKSFGV 119
BLAST of NO13G01490 vs. NCBI_GenBank
Match: CEM08917.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 131.7 bits (330), Expect = 2.500e-27 Identity = 77/173 (44.51%), Postives = 99/173 (57.23%), Query Frame = 0 Query: 30 FLIPSAPFTLSSSTLAPL--SSAAAHKVAKAIATPRTQRGKLFADVAEKNEGTVEVAERVITVSDSALEHLKDLRTKQ---GVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 FLI A L S S +A VA + +R L + R I ++ ALE + +LR K+ G L LRMGV+SGGCSG+SY +D++ DV D +EAY++ F VVDPK+LLYLFG++LD+ D LIGGGF F NPNA +SCGCG SFGV Sbjct: 5 FLILGAAAVLPSEAARRFLQSRGSAAFVAPPASVNAPRRPVLLRRALAVRSSGASTSRRAIDITPKALERIAELRAKKQRDGDGDLVLRMGVKSGGCSGLSYTMDLIDASDVGPRDTVEAYEDEGFKYVVDPKALLYLFGMQLDYCDDLIGGGFRFDNPNADKSCGCGMSFGV 177
BLAST of NO13G01490 vs. NCBI_GenBank
Match: GAQ89196.1 (Iron-sulphur cluster biosynthesis family protein [Klebsormidium nitens]) HSP 1 Score: 131.7 bits (330), Expect = 2.500e-27 Identity = 66/130 (50.77%), Postives = 92/130 (70.77%), Query Frame = 0 Query: 66 RGKLFADVAEKNEGTVEVAERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSF 196 +G++ VA + T+ A I++S+ AL H+K +R + G D L LR+GVR GGCSGMSYV++ ++ ++ EED + D+ DF+ V DPKSLLYLFG++LD+ D LIGGGF+F NPNA +CGCG SF Sbjct: 50 KGRITCSVATPSPPTLPPA---ISLSEKALAHIKRMRNESGKD-LTLRVGVRQGGCSGMSYVMEFEERANIREEDSL--IDQEDFTMVCDPKSLLYLFGMQLDYSDALIGGGFSFQNPNASSTCGCGKSF 173
BLAST of NO13G01490 vs. NCBI_GenBank
Match: XP_002949272.1 (iron-sulfur cluster assembly protein [Volvox carteri f. nagariensis] >EFJ49765.1 iron-sulfur cluster assembly protein [Volvox carteri f. nagariensis]) HSP 1 Score: 131.0 bits (328), Expect = 4.200e-27 Identity = 65/120 (54.17%), Postives = 85/120 (70.83%), Query Frame = 0 Query: 79 GTVEVAERVITVSDSALEHLKDLRTK-QGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 GTV IT++ ALE L+ LR + + + L LR+GV+ GGCSG+SY +D ++ V+E+DH+ +YD+ F VVDPKSLLYLFG+RL + LIGGGF F NPNA +SCGCG SFGV Sbjct: 37 GTVTTPASAITLTAEALEQLRKLRAEHKNQESLLLRVGVKQGGCSGLSYHMDFETQDKVSEDDHVMSYDD-GFRLVVDPKSLLYLFGMRLGYSSALIGGGFQFHNPNATDSCGCGKSFGV 155
BLAST of NO13G01490 vs. NCBI_GenBank
Match: WP_015182004.1 (iron-sulfur cluster assembly accessory protein [Microcoleus sp. PCC 7113] >AFZ17852.1 Iron-sulfur cluster assembly accessory protein [Microcoleus sp. PCC 7113]) HSP 1 Score: 130.6 bits (327), Expect = 5.500e-27 Identity = 64/113 (56.64%), Postives = 82/113 (72.57%), Query Frame = 0 Query: 85 ERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 +R I ++++AL+H+ LR +QG D LYLR+GVR GGCSGMSY++D V E+D E +D F V DPKS+LYL+GL LD+ D +IGGGF F NPNA +SCGCG SFGV Sbjct: 9 QRGIQLTEAALKHVLALRQRQGKD-LYLRVGVRQGGCSGMSYMMDFEDPSKVQEKD--EVFDYEGFKIVCDPKSMLYLYGLVLDYSDAMIGGGFQFTNPNASQSCGCGKSFGV 118
BLAST of NO13G01490 vs. NCBI_GenBank
Match: WP_022605156.1 (iron-sulfur cluster assembly accessory protein [Rubidibacter lacunae] >ERN42413.1 Iron-sulfur cluster assembly accessory protein [Rubidibacter lacunae KORDI 51-2]) HSP 1 Score: 130.6 bits (327), Expect = 5.500e-27 Identity = 60/110 (54.55%), Postives = 82/110 (74.55%), Query Frame = 0 Query: 88 ITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 I V+D+A++HL+ LR +Q D L LR+GVR GGCSGMSY +D +++ ++D + AY E F +VDPKSLLY++G++LD+ LIGGGF F NPNA ++CGCG SFGV Sbjct: 11 ILVTDTAMQHLRQLRAQQSAD-LCLRVGVRGGGCSGMSYTMDFDSADNIRDDDEVFAY-EDGFRIIVDPKSLLYIYGMQLDYSTALIGGGFQFSNPNASQTCGCGKSFGV 118 The following BLAST results are available for this feature:
BLAST of NO13G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01490 ID=NO13G01490|Name=NO13G01490|organism=Nannochloropsis oceanica|type=gene|length=2914bpback to top protein sequence of NO13G01490.1 >NO13G01490.1-protein ID=NO13G01490.1-protein|Name=NO13G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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