NO13G01490, NO13G01490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01490 vs. NCBI_GenBank
Match: EWM21820.1 (iron-sulfur cluster assembly accessory protein [Nannochloropsis gaditana]) HSP 1 Score: 256.1 bits (653), Expect = 8.600e-65 Identity = 133/197 (67.51%), Postives = 155/197 (78.68%), Query Frame = 0 Query: 1 MHRPFALFSVGHAKAMLMLLLGVLATTQAFLIPSAPFTLSSSTLAPLSSAAAHKVAKAIATPRTQRGKLFADVAEKNEGTVEVAERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 MHRPF L ++L+ LL + T F +P P + SS+ + +S + V KA+ PR +L+A+VAEK+EG +V ERVITVSDSAL+HL+DLR KQGV+HLYLRMGVRSGGCSGMSYVLDVMK E+VTEEDH+E+Y EH FSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV Sbjct: 1 MHRPFLLQGTVAPISLLLGLLVICTITHGFFVPYLPSSSLSSSASAMSVVSGLSVGKAV--PRLGSSQLWAEVAEKSEGVSDVTERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195
BLAST of NO13G01490 vs. NCBI_GenBank
Match: XP_005853547.1 (iron-sulfur cluster assembly accessory protein [Nannochloropsis gaditana CCMP526] >EKU22816.1 iron-sulfur cluster assembly accessory protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 231.5 bits (589), Expect = 2.300e-57 Identity = 124/197 (62.94%), Postives = 146/197 (74.11%), Query Frame = 0 Query: 1 MHRPFALFSVGHAKAMLMLLLGVLATTQAFLIPSAPFTLSSSTLAPLSSAAAHKVAKAIATPRTQRGKLFADVAEKNEGTVEVAERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 MHRPF L ++L+ LL + T F +P P + SS+ + +S + V KA+ PR +L+A+VAEK+EG +V ERVITVSDSAL+HL+DLR KQGV+HLYLRMGVRS G G VMK E+VTEEDH+E+Y EH FSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV Sbjct: 1 MHRPFLLQGTVAPISLLLGLLVICTITHGFFVPYLPSSSLSSSASAMSVVSGLSVGKAV--PRLGSSQLWAEVAEKSEGVSDVTERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRSRGLLGHELRPGVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195
BLAST of NO13G01490 vs. NCBI_GenBank
Match: CBJ29104.1 (iron-sulfur assembly protein [Ectocarpus siliculosus]) HSP 1 Score: 158.3 bits (399), Expect = 2.500e-35 Identity = 70/117 (59.83%), Postives = 94/117 (80.34%), Query Frame = 0 Query: 82 EVAERVITVSDSALEHLKDLRTKQGVD-HLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 EV E+++ + A++HL++LR QG + ++LRMGVRSGGCSG+SY++D++KKE++TE+D +E YD F CV+DPKS+LYL+GL LDF D LIGGGF F NPNA+ SCGCG SFGV Sbjct: 61 EVMEKIVNIRPKAMDHLQELRRSQGTEGDIFLRMGVRSGGCSGLSYIMDLVKKEEITEDDMVEEYD--GFKCVIDPKSVLYLYGLELDFSDALIGGGFQFQNPNAESSCGCGKSFGV 175
BLAST of NO13G01490 vs. NCBI_GenBank
Match: OEU15275.1 (hypothetical protein FRACYDRAFT_218226 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 146.0 bits (367), Expect = 1.300e-31 Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 0 Query: 85 ERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 + VI + A++ L++LR KQ D L LRMGVR+GGCSG+SY++D ++DV E+D I+ Y CVVD KS+LYL+GL LDF ++LIGGGF F NPNA++SCGCGSSFGV Sbjct: 39 DAVINIKPKAMKRLRELREKQKTDSLVLRMGVRNGGCSGLSYIMDFATEDDVQEDDAIDEYPGEKLKCVVDAKSMLYLYGLELDFSEELIGGGFKFFNPNAEDSCGCGSSFGV 151
BLAST of NO13G01490 vs. NCBI_GenBank
Match: XP_005775416.1 (iron-sulfur cluster assembly accessory protein, HesB/YadR/YfhF [Emiliania huxleyi CCMP1516] >EOD22987.1 iron-sulfur cluster assembly accessory protein, HesB/YadR/YfhF [Emiliania huxleyi CCMP1516]) HSP 1 Score: 139.8 bits (351), Expect = 9.000e-30 Identity = 75/184 (40.76%), Postives = 113/184 (61.41%), Query Frame = 0 Query: 14 KAMLMLLLGVLATTQAFLIPSAPFTLSSSTLAPLSSAAAHKVAKAIATPRTQRGKLFADVAEKNEGTVEVAERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 + +L++L L ++L P P L+ + LA +SS A A + +G + +I+ S+ AL +++LR K G + LRMGVR+GGCSGMSYV+D M++ ++ E+D Y++ CV+DPKSL++L+GL+LD+ D+LIGGGF+F NPNA+E+CGCG SFGV Sbjct: 2 RLILLVLFASLRAASSYLAP-PPAALTRTRLAVVSSGGAETALPVRARALLCARPTLLRACPRLDGGA-AQDSIISFSERALTQIQELREKSGKERACLRMGVRAGGCSGMSYVMDFMEEGEIDEKDTTIDYEQGTIRCVIDPKSLMFLYGLQLDYSDELIGGGFSFANPNAEETCGCGKSFGV 183
BLAST of NO13G01490 vs. NCBI_GenBank
Match: EJK48037.1 (hypothetical protein THAOC_33202 [Thalassiosira oceanica]) HSP 1 Score: 139.4 bits (350), Expect = 1.200e-29 Identity = 63/115 (54.78%), Postives = 84/115 (73.04%), Query Frame = 0 Query: 85 ERVITVSDSALEHLKDLRTKQG--VDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 + +I + + A++ L +L+ KQ L LRMGVR+GGCSG+SYV+D +E++ +ED ++ Y + CVVD KSLLYL+GL LD+ D LIGGGF F NPNA+ESCGCGSSFGV Sbjct: 67 DAIIMIKEKAMDRLVELKQKQADPSSPLILRMGVRNGGCSGLSYVMDFSTEEEIQDEDEVDDYSQEGIKCVVDAKSLLYLYGLELDYSDDLIGGGFKFFNPNAEESCGCGSSFGV 181
BLAST of NO13G01490 vs. NCBI_GenBank
Match: PSC67830.1 (iron-sulfur cluster assembly [Micractinium conductrix] >PSC67855.1 iron-sulfur cluster assembly [Micractinium conductrix] >PSC71899.1 iron-sulfur cluster assembly [Micractinium conductrix]) HSP 1 Score: 139.0 bits (349), Expect = 1.500e-29 Identity = 78/150 (52.00%), Postives = 95/150 (63.33%), Query Frame = 0 Query: 51 AAHKVAKAIATP---RTQRGKLFADVAEKNEGTVEVAERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 AA + A A+ T R R L A EG V+ IT++D ALEHL LR+ G + L LRMGV+SGGCSGMSYV+D +E++ +D + Y E F V DPKSLLYLFG+ LD+ LIGGGF F NPNA +SCGCG SFGV Sbjct: 12 AAQRPATALRTRSAFRPARPLLLKLRAAAVEGAVKPLAPAITLTDRALEHLTKLRSDSGGEKLLLRMGVKSGGCSGMSYVMDFESEENIKPDDAVMEY-EGGFKLVTDPKSLLYLFGMHLDWSPALIGGGFQFQNPNAADSCGCGKSFGV 160
BLAST of NO13G01490 vs. NCBI_GenBank
Match: GAX16544.1 (iron-sulfur cluster assembly protein [Fistulifera solaris]) HSP 1 Score: 136.3 bits (342), Expect = 1.000e-28 Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = 0 Query: 62 PRTQRGKLFADVAEKNEGTVEV---AERVITVSDSALEHLKDLR---TKQGV-DHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 P R L+AD E T++ + V+ + +A++ L++LR K V D L LRMGV+SGGCSGMSYV+D ++ + E+D ++ Y + CVVD KS+LYL+GL LD+ +LIGGGF F NPNA+ESCGCGSSFGV Sbjct: 26 PLPFRTTLYADTTEAPPLTIDYEIPEDAVVMIKPAAMKRLRELRQTELKDPVNDTLILRMGVQSGGCSGMSYVMDFSSEDSIQEDDVVDEYADEKVKCVVDAKSMLYLYGLELDYSTELIGGGFKFFNPNAEESCGCGSSFGV 168
BLAST of NO13G01490 vs. NCBI_GenBank
Match: PRW59324.1 (Iron-sulfur cluster assembly accessory [Chlorella sorokiniana]) HSP 1 Score: 136.0 bits (341), Expect = 1.300e-28 Identity = 65/112 (58.04%), Postives = 86/112 (76.79%), Query Frame = 0 Query: 88 ITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAY--DEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 IT++ +ALEHL+ LR + G D L LRMGV+SGGCSGMSYV+D K+E+V ++D + ++ + +F V DPKSLLYLFG++LD+ L+GGGF F NPNA+ SCGCG SFGV Sbjct: 58 ITLTPAALEHLQKLRRESGGDGLLLRMGVKSGGCSGMSYVMDFEKQENVKKDDLVMSFECEGGEFRLVCDPKSLLYLFGMQLDWSSALVGGGFQFNNPNAESSCGCGKSFGV 169
BLAST of NO13G01490 vs. NCBI_GenBank
Match: XP_005646925.1 (FeS cluster assembly accessory/regulatory protein [Coccomyxa subellipsoidea C-169] >EIE22381.1 FeS cluster assembly accessory/regulatory protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 135.6 bits (340), Expect = 1.700e-28 Identity = 69/118 (58.47%), Postives = 85/118 (72.03%), Query Frame = 0 Query: 80 TVEVAERVITVSDSALEHLKDLRTKQGVDHLYLRMGVRSGGCSGMSYVLDVMKKEDVTEEDHIEAYDEHDFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 198 TV A IT++++AL++LK LR G + + LRMGV+SGGCSGMSY +D K+E+V ED + Y E F V DPKSLLYLFG+RLD+ LIGGGF F NPNA+ SCGCG SFGV Sbjct: 12 TVAPAPPAITLTEAALKNLKRLREDTGDEKVILRMGVKSGGCSGMSYHMDFEKEENVRAEDAVMEY-EDGFKLVCDPKSLLYLFGMRLDYSAALIGGGFQFHNPNAESSCGCGKSFGV 128 The following BLAST results are available for this feature:
BLAST of NO13G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01490 ID=NO13G01490|Name=NO13G01490|organism=Nannochloropsis oceanica|type=gene|length=2914bpback to top protein sequence of NO13G01490.1 >NO13G01490.1-protein ID=NO13G01490.1-protein|Name=NO13G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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