NO13G01450, NO13G01450 (gene) Nannochloropsis oceanica

Overview
NameNO13G01450
Unique NameNO13G01450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1627
Alignment locationchr13:433608..435234 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:433608..435234 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO13G01450 vs. NCBI_GenBank
Match: ORX95083.1 (hypothetical protein K493DRAFT_315178 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 144.4 bits (363), Expect = 8.600e-31
Identity = 97/340 (28.53%), Postives = 154/340 (45.29%), Query Frame = 0
Query:  131 TPTPVCDTTTTPSSPKKVSWLSALFGDSGSSQPKVHRPFGVHEKAHLKLATRKKDKVMQ-----TNPGARVEPEFLPEIESHRLVEEALDVIKKYGISHVSEEQRIEMAHQLKHFPLPKADLKELVNMQRVTGRFEDA---AQTLAPWGYGDDFNIEQVPPALRSM-LERIQASPHFCLGKPRDITLNHRENYFYRLDPHIDPVDDGGNVFILGLLSGTVLTLSPTSRTMHPDQHKAMDPRRVAEVSWLPGKDIDVDLPARTLLHLSGDARYSWCHGIRLGVTHPQIEDYYLGAELPEEARVLGGEQKGEVPLWDWWGNMKNLRRRGPERLSIIFAFSDP 462
            T  P+    T P  P+ VS                HRPF   + + ++     +    Q      NPG R++     E E   L+ E   + K++G S + +  +      + +    K   +++VN  RVTGR E         APWGYGD F+  Q+P  L+++  E+I  +P   LG  RDITL++R   F++LDP +DP DDG N+ I+  LS +V+T  P + T         +P+ +   SW   +D+DV +   ++   +  ARY W H IR GV  P+  D +                       DW+G++  L +RG E+ ++  A+  P
Sbjct:   26 TQKPLSAIKTQPIGPRAVS----------------HRPFNATDASLIRRVANTRSAKGQPISTAENPGIRIQRNMYTEKEGIELIREFRGLFKRFGFSTLPQAIQKGTKVFVLNEKGEKETSRDIVNSYRVTGRPEQVDGKHMPTAPWGYGDTFDQNQLPSWLKALATEKIPNTPGLALGALRDITLDYRTGAFFQLDPQVDPKDDGPNIAIVNFLSDSVVTFIPPNST----TKWRTNPQEIVSRSWTE-EDLDVLVRVGSMCLFNDKARYEWAHAIRTGVYLPKPHDMFC----------------------DWFGDVSYLNKRGNEKYTLTLAYGTP 322          
BLAST of NO13G01450 vs. NCBI_GenBank
Match: PNW82794.1 (hypothetical protein CHLRE_06g294500v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 142.9 bits (359), Expect = 2.500e-30
Identity = 79/184 (42.93%), Postives = 106/184 (57.61%), Query Frame = 0
Query:  251 VNMQRVTGRFEDAAQTLAPWGYGDDFNIEQVPPALRSMLERIQASPHFCLGKPRDITLNHRENYFYRLDPHIDPVDDGGNVFILGLLSGTVLTLSPTS--------RTMHPDQHKAMDPRRVAEVSWLPGKDIDVDLPARTLLHLSGDARYSWCHGIRLGVTHPQIEDYYLGAELPEEARVLGG 427
            VNM RVTGR E AAQ   PWGYGDD +   +P ++++  +R++A P   LG+ RD+T+N+R + F RLDPH+DP  DG NVF+L + + +VLTLSP            +  D+ + +  R     SW    DIDV +P    LH+SGDAR+ W HG RLGV           A + EEA  L G
Sbjct:   10 VNMLRVTGRPEHAAQR-RPWGYGDDLDEAALPTSIKAAADRLRALPGLRLGRLRDVTINYRHSGFLRLDPHLDPEGDGENVFVLSVDAPSVLTLSPVRWYRLTRLLGWLGADEREQVQ-RESERDSW-TRHDIDVLVPPGAALHISGDARWKWMHGTRLGVAPAGASGGEARARVSEEANRLAG 190          
BLAST of NO13G01450 vs. NCBI_GenBank
Match: XP_014149702.1 (hypothetical protein SARC_11680 [Sphaeroforma arctica JP610] >KNC75800.1 hypothetical protein SARC_11680 [Sphaeroforma arctica JP610])

HSP 1 Score: 109.0 bits (271), Expect = 4.000e-20
Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = 0
Query:  256 VTGRFEDAAQTLAPWGYGDDFNIEQVPPALRSMLERIQASPHFCLGKPRDITLNHRENYFYRLDPHIDPVDDGGNVFILGLLSGTVLTLSPTSRTMHPDQH 357
            +TGR  +      PWGYGDDF+  +VP  LR++ +RI  S HF +G PRDIT+N+R++  ++LDPH DP  DGGN+FI+  LS  VLTL+P     HP  H
Sbjct:    1 MTGR-PEGTNVACPWGYGDDFDTFKVPTPLRTIQDRIMKSEHFHVGAPRDITVNYRQHSLFKLDPHYDPRTDGGNIFIINFLSYVVLTLTPE----HPVNH 96          
BLAST of NO13G01450 vs. NCBI_GenBank
Match: PNH11031.1 (hypothetical protein TSOC_002187, partial [Tetrabaena socialis])

HSP 1 Score: 106.7 bits (265), Expect = 2.000e-19
Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = 0
Query:  236 QLKHFPLPKADLKELVNMQRVTGRFEDAAQTLAPWGYGDDFNIEQVPPALRSMLERIQASPHFCLGKPRDITLNHRENYFYRLDPHIDPVDDGGNVFILGLLSGTVLTLSP 347
            Q+ + P P       VNM RVTGR E   QT  PWGYGD  +   +PPA+R+   RI++ P   LG+ RD+T+N+R + F RLDPH+DP  DG NVF+L + +  VLTLSP
Sbjct:    2 QMSYLPRPPP-----VNMLRVTGRPEHQQQT-RPWGYGDTMDEAALPPAIRAAACRIRSLPGLRLGRLRDVTINYRHSSFLRLDPHVDPAADGENVFVLSVDAPAVLTLSP 106          
BLAST of NO13G01450 vs. NCBI_GenBank
Match: XP_001701589.1 (predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 104.8 bits (260), Expect = 7.500e-19
Identity = 59/145 (40.69%), Postives = 80/145 (55.17%), Query Frame = 0
Query:  290 ERIQASPHFCLGKPRDITLNHRENYFYRLDPHIDPVDDGGNVFILGLLSGTVLTLSPTS--------RTMHPDQHKAMDPRRVAEVSWLPGKDIDVDLPARTLLHLSGDARYSWCHGIRLGVTHPQIEDYYLGAELPEEARVLGG 427
            +R++A P   LG+ RD+T+N+R + F RLDPH+DP  DG NVF+L + + +VLTLSP            +  D+ + +  R     SW    DIDV +P    LH+SGDAR+ W HG RLGV           A + EEA  L G
Sbjct:   17 DRLRALPGLRLGRLRDVTINYRHSGFLRLDPHLDPEGDGENVFVLSVDAPSVLTLSPVRWYRLTRLLGWLGADEREQVQ-RESERDSW-TRHDIDVLVPPGAALHISGDARWKWMHGTRLGVAPAGASGGEARARVSEEANRLAG 159          
BLAST of NO13G01450 vs. NCBI_GenBank
Match: ETO19194.1 (hypothetical protein RFI_18037 [Reticulomyxa filosa])

HSP 1 Score: 103.2 bits (256), Expect = 2.200e-18
Identity = 75/274 (27.37%), Postives = 128/274 (46.72%), Query Frame = 0
Query:  166 HRPFGVHEKAHLKLATRKKDKVMQTNPGARVEPEFLPEIESHRLVEEALDVIKKYGISHVSEEQRIEMAHQLKHFPLPKADLKELVNMQRVTGR-------------------------------FEDAAQTLAPWGYGDDFNIEQVPPALRSMLERIQASPHFCLGKPRDITLNHRENYFYRLDPHIDPVDDGGNVFILGLLSGTVLTLSPTSRTMHPDQHKAMDPRRVAEVSWLPGKDIDVDLPAR--TLLHLSGDARYSWCHGIRLGVTHP 407
            HRP    +  ++K   + +  ++  NPG R+E  FL   E  +L  +A  ++ +YG S +    +     QL  +   +  LK  VN  + +GR                               +E      APWG G+  N+ Q+P + ++++ +I++   + LG  RD+T++ R++ ++RL PH  P++DG N+F+L L S  VLTL P+ +    D+H+  +   + + S     D D+D+  R   LL LS  AR      +R GV  P
Sbjct:   68 HRPVSPVDNYYIK-NMKGQSPLLGENPGIRIEENFLSPNEQKQLRLDAHVLLNQYGYSSIPFYMKDTFLKQLGMYQ-SRPTLK--VNAFKCSGRPPADELQESNWTPAIQQAKKEHDAHEKPQYAYESNPPVAAPWGCGNGLNVRQLPSSFQTLISKIKSQSTYSLGAVRDVTIDFRDHKYFRLFPHKYPMEDGSNLFMLTLDSDVVLTLLPSEK----DRHRRTE---IFDQSLYSFTDADIDVLHRKGDLLCLSDKARLHMELAVRQGVEEP 330          
BLAST of NO13G01450 vs. NCBI_GenBank
Match: CCM19128.1 (hypothetical protein, conserved [Leishmania guyanensis])

HSP 1 Score: 77.8 bits (190), Expect = 9.900e-11
Identity = 50/163 (30.67%), Postives = 82/163 (50.31%), Query Frame = 0
Query:  246 DLKELVNMQRVTGRFEDAAQTLAPWGYGDDFNIEQVPPALRSMLERIQASPHFCLGKPRDITLNHR-ENYFYRLDPHIDPVDDGGNVFILGLL---SGTVLTLSPTSRTMHPDQHKAMDPRRVAEVSWLPGKDIDVDLPARTLLHLSGDARYSWCHGIRLGVT 405
            D   L + + +    ED     APWG GD   + ++P +LR ++ER++ +    +G+ R + + +     FYR+ P    + DG +  ++ L    S TV+T+SP  R+      +  + R V   SW   +D+D  LP+  +L + G ARY W  GIR G T
Sbjct:  180 DFGFLTHTRIIADHAEDIQLMKAPWGSGDQIRLAEMPASLRYLVERVRQT-FEGIGRLRHVYIEYSPTGQFYRV-PRPPKIYDGHDYVVIPLRRDHSDTVVTMSPVLRS------RVSNVREVVRHSW-TSRDVDALLPSGCMLRVYGTARYDWGWGIRPGPT 333          
BLAST of NO13G01450 vs. NCBI_GenBank
Match: XP_010702711.1 (hypothetical protein LPMP_342850 [Leishmania panamensis] >AIO01911.1 hypothetical protein LPMP_342850 [Leishmania panamensis])

HSP 1 Score: 77.0 bits (188), Expect = 1.700e-10
Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 0
Query:  246 DLKELVNMQRVTGRFEDAAQTLAPWGYGDDFNIEQVPPALRSMLERIQASPHFCLGKPRDITLNHR-ENYFYRLDPHIDPVDDGGNVFILGLL---SGTVLTLSPTSRTMHPDQHKAMDPRRVAEVSWLPGKDIDVDLPARTLLHLSGDARYSWCHGIRLGVT 405
            D   L + + +    ED     APWG GD   + ++P +LR ++ER++ +    +G+ R + + +     FYR  P    + DG +  ++ L    S TV+T+SP  R+      +  + R V   SW   +D+D  LP+  +L + G ARY W  GIR G T
Sbjct:  144 DFGFLTHTRIIADHAEDIQLMKAPWGSGDQIRLAEMPASLRYLVERVRQT-FEGIGRLRHVYIEYSPTGQFYRA-PRPPKIYDGHDYVVIPLQRDHSDTVVTMSPVLRS------RVSNVREVVRHSW-TSRDVDALLPSGCMLRVYGTARYDWGWGIRPGPT 297          
BLAST of NO13G01450 vs. NCBI_GenBank
Match: KPI85460.1 (hypothetical protein ABL78_5481 [Leptomonas seymouri])

HSP 1 Score: 77.0 bits (188), Expect = 1.700e-10
Identity = 56/182 (30.77%), Postives = 88/182 (48.35%), Query Frame = 0
Query:  250 LVNMQRVTGRFEDAAQTLAPWGYGDDFNIEQVPPALRSMLERIQASPHFCLGKPRDITLNHR-ENYFYRLDPHIDPVDDGGNVFILGLL---SGTVLTLSPTSRTMHPDQHKAMDPRRVAEVSWLPGKDIDVDLPARTLLHLSGDARYSWCHGIRLGVTHPQIEDYYLGAELPEEARVLGGE 428
            L +++ +    ED     APWG GD   +EQ+P +LR ++ R Q +    +G+ R + + +     FYR+ P      DG +  ++ L      TV+T SP  R+      +  D R VA  SW   +DID  +PA ++L + G ARY W  G+R G         + G+ L   +R L G+
Sbjct:  200 LRSIRVIADHAEDIQPMKAPWGCGDSIRLEQMPASLRFLVHRTQRA-FEGVGRLRHVYIEYSPTGEFYRV-PRPPKAYDGHDYVVIPLRRDGRDTVVTTSPVLRS------RMSDVRDVALSSW-TSRDIDALIPAGSMLRVYGTARYEWGWGVRPG-------PVWFGSRLNTISRPLDGD 365          
BLAST of NO13G01450 vs. NCBI_GenBank
Match: XP_015664746.1 (hypothetical protein ABB37_00526 [Leptomonas pyrrhocoris] >XP_015664747.1 hypothetical protein ABB37_00526 [Leptomonas pyrrhocoris] >KPA86307.1 hypothetical protein ABB37_00526 [Leptomonas pyrrhocoris] >KPA86308.1 hypothetical protein ABB37_00526 [Leptomonas pyrrhocoris])

HSP 1 Score: 75.9 bits (185), Expect = 3.700e-10
Identity = 54/180 (30.00%), Postives = 80/180 (44.44%), Query Frame = 0
Query:  261 EDAAQTLAPWGYGDDFNIEQVPPALRSMLERIQASPHFCLGKPRDITLNHRENYFYRLDPHIDPVDDGGNVFILGLL---SGTVLTLSPTSRTMHPDQHKAMDPRRVAEVSWLPGKDIDVDLPARTLLHLSGDARYSWCHGIRLGVTHPQIEDYYLGAELPEEARVLGGEQKGEVPLWDW 438
            ED     APWG GD   +EQ+P +LR ++   Q +    +G+ R + + +     +   P    + DG +  I+ L      TV+T+SP  R+      +  D R VA  SW   +D+D  +P   +L + G ARY W  G+R G T        + A L   A   G       PLW W
Sbjct:  208 EDIQPMKAPWGCGDHMRLEQMPASLRYLVRHTQQA-FEGMGRLRHVYIEYSPTGQFFRAPRPPKMYDGHDYVIIPLRRDGCDTVVTMSPVLRS------RMSDLREVALNSW-TSRDVDALVPPGCMLRVYGTARYEWGWGVRPGPTWFGSRLNSVAAPLHTSALASGDAAS---PLWSW 376          
The following BLAST results are available for this feature:
BLAST of NO13G01450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ORX95083.18.600e-3128.53hypothetical protein K493DRAFT_315178 [Basidiobolu... [more]
PNW82794.12.500e-3042.93hypothetical protein CHLRE_06g294500v5 [Chlamydomo... [more]
XP_014149702.14.000e-2049.50hypothetical protein SARC_11680 [Sphaeroforma arct... [more]
PNH11031.12.000e-1948.65hypothetical protein TSOC_002187, partial [Tetraba... [more]
XP_001701589.17.500e-1940.69predicted protein, partial [Chlamydomonas reinhard... [more]
ETO19194.12.200e-1827.37hypothetical protein RFI_18037 [Reticulomyxa filos... [more]
CCM19128.19.900e-1130.67hypothetical protein, conserved [Leishmania guyane... [more]
XP_010702711.11.700e-1030.67hypothetical protein LPMP_342850 [Leishmania panam... [more]
KPI85460.11.700e-1030.77hypothetical protein ABL78_5481 [Leptomonas seymou... [more]
XP_015664746.13.700e-1030.00hypothetical protein ABB37_00526 [Leptomonas pyrrh... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001749NSK001749Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01450.1NO13G01450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672307gene_6864Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100399g5gene8623Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01450.1NO13G01450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01450 ID=NO13G01450|Name=NO13G01450|organism=Nannochloropsis oceanica|type=gene|length=1627bp
ATGGCGACACCACTTGTGATGATGGATGCGCTAGAGAAGCGGATATACCC
CGTTATTCGAGAAGCAACAACCAGGGACCACGTGCCTTACAATGCCCTTC
TTGCTCATCACAATGTTCCCAAACACACATTCCACAGCCCCCCACGCCAT
TGCATCTGGTACGAACTCCCCACCACCAGCCACAAGCACGCCACGGTGTT
GAGAGATATCCAAGGGTTTGCCGCAGAGTTCTCGTGCAGCAGCACGTACC
GGACCATGGCCAGATCTCTTATGGTGGCCGTCAAGGCCCTAAATCAGGCG
CAAATTACCCTCAGAACCGTGAGTACTCATGCGGCTTCAGTGTCTACAAA
CACCGTTGCCGGCAAAACCAGAGTACTTAGCAGCACTGCGACCCCCACTC
CTGTTTGCGACACAACTACTACTCCTTCCTCCCCAAAAAAGGTCTCCTGG
CTTAGCGCCCTTTTTGGTGACAGTGGCTCGTCCCAGCCTAAGGTGCATCG
CCCCTTTGGTGTCCACGAAAAGGCACACTTGAAGTTAGCTACGCGCAAAA
AAGACAAAGTCATGCAAACCAACCCCGGAGCACGCGTTGAGCCCGAATTT
CTCCCTGAAATCGAATCACATAGGTTGGTAGAGGAAGCGCTCGACGTAAT
TAAGAAGTATGGGATTTCGCATGTGAGTGAGGAGCAACGGATTGAGATGG
CGCATCAGCTGAAGCATTTTCCTTTGCCGAAGGCTGACTTGAAGGAATTG
GTCAATATGCAGCGTGTCACGGGGgtaagtgctgcatacgaggtggatag
aaagatagaaaacacgaaaaagggagagtgtgtgtggctagaggcgctat
ggataggatagcaacggcttgattcaggactcaacttctcaattttctcc
tcccttccttttcaccctccactttcctccctcccagCGCTTCGAAGACG
CCGCTCAAACCCTGGCTCCTTGGGGGTACGGAGACGACTTCAACATTGAA
CAGGTTCCTCCCGCGCTACGCAGCATGCTTGAGCGCATTCAAGCCTCACC
GCATTTTTGTTTGGGAAAGCCCCGGGATATTACCTTGAACCATCGCGAGA
ATTATTTCTATCGTCTAGACCCTCATATTGACCCTGTCGATGATGGGGGA
AATGTCTTCATCTTGGGGCTGTTGTCAGGGACGGTCTTGACCTTATCGCC
GACCAGTAGAACAATGCACCCGGATCAGCACAAAGCGATGGACCCAAGAA
GAGTGGCTGAAGTGTCGTGGTTACCTGGGAAGGATATTGATGTTGACTTG
CCTGCACGGACCTTGTTGCATTTGAGTGGTGATGCGCGATATAGCTGGTG
TCATGGCATACGTCTAGGGGTGACCCATCCGCAGATTGAGGATTACTATT
TGGGGGCGGAATTACCAGAAGAGGCAAGAGTGCTGGGGGGAGAGCAGAAG
GGAGAAGTCCCTTTGTGGGATTGGTGGGGGAACATGAAGAATTTGAGACG
ACGGGGCCCGGAACGACTGAGCATTATTTTTGCCTTCTCGGATCCGGAAT
AGAATTGAGAGGGCAGCGGACTCGGTGTGTGCACTCGTAAGTGTAGAAAG
AAAGTGAAAAACATTGAGAGTGTTGGT
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protein sequence of NO13G01450.1

>NO13G01450.1-protein ID=NO13G01450.1-protein|Name=NO13G01450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=463bp
MATPLVMMDALEKRIYPVIREATTRDHVPYNALLAHHNVPKHTFHSPPRH
CIWYELPTTSHKHATVLRDIQGFAAEFSCSSTYRTMARSLMVAVKALNQA
QITLRTVSTHAASVSTNTVAGKTRVLSSTATPTPVCDTTTTPSSPKKVSW
LSALFGDSGSSQPKVHRPFGVHEKAHLKLATRKKDKVMQTNPGARVEPEF
LPEIESHRLVEEALDVIKKYGISHVSEEQRIEMAHQLKHFPLPKADLKEL
VNMQRVTGRFEDAAQTLAPWGYGDDFNIEQVPPALRSMLERIQASPHFCL
GKPRDITLNHRENYFYRLDPHIDPVDDGGNVFILGLLSGTVLTLSPTSRT
MHPDQHKAMDPRRVAEVSWLPGKDIDVDLPARTLLHLSGDARYSWCHGIR
LGVTHPQIEDYYLGAELPEEARVLGGEQKGEVPLWDWWGNMKNLRRRGPE
RLSIIFAFSDPE*
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Synonyms
Publications