Naga_100399g5, gene8623 (gene) Nannochloropsis gaditana

Overview
NameNaga_100399g5
Unique Namegene8623
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:409828..411638 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100399g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:409828..411638 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006810transport
GO:0008219cell death
GO:0006950response to stress
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01450NO13G01450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8893rna8893-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8893rna8893Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8893

>rna8893-protein ID=rna8893-protein|Name=rna8893|organism=Nannochloropsis gaditana|type=polypeptide|length=386bp
MASKVSLAAAKVASNKAALQRVTSDLIASPIAYFARTSHFDPSARVHAGL
RFQSTYAKASTNLTAPKMTTSWLSALFGGGNSKSKAHRPFGRHEEAHLRL
ATRKTNKILKANPGARVEPKFLSEEDAQMLVEEAMDIINIYGMSHVSEEQ
RDVLANQLKHFPLPKEDLRALVNMQRVTGRFEDEAQKLAPWGYGDDFQVD
QVPPALRKVLESIQDSPHFCVGKPRDITINRREKSFYRLDPHIDPAKDGG
NVFILSLLSGTVMTLTPTSRTMHPDQHKAMDTRKVAEVSWLPGKDIDVDL
PVLSLLHLSGDARYTWCHGIRPGVTQSQISDFNLGGVMSDEMEGVDQEAV
RTLEGLPLWDWWGSMKNLRRRGPERVSIICAFADPE
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Synonyms
Publications