NO13G01190, NO13G01190 (gene) Nannochloropsis oceanica

Overview
NameNO13G01190
Unique NameNO13G01190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length636
Alignment locationchr13:364392..365027 +

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Properties
Property NameValue
DescriptionChaperone protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:364392..365027 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013126Hsp_70_fam
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
BLAST of NO13G01190 vs. NCBI_GenBank
Match: EWM21791.1 (chaperone protein [Nannochloropsis gaditana])

HSP 1 Score: 310.5 bits (794), Expect = 4.100e-81
Identity = 166/213 (77.93%), Postives = 186/213 (87.32%), Query Frame = 0
Query:    1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGGQLIGSMEEGGKGIVREVMMR--ELAEMDGEEMVSDKKKLAELMRERALKGRQVSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARGLMDFQARGGQKGPRSQKQKKGF 212
            ME LC DLYDRLL+PMRQAALMAGATL GEVAPDALGGQL+ ++ +GG+    EV+MR  ELA  D E M S+K+KLA LMRERA+ GR+VSKARS Y+KNLNAVRKRNPGLKIREFPQGR I+EVVMVGGATRMPSI+RLV AVTG  PR TV+PDEAVALGAGIHAGVLDG IEDMDM+TPMQAAIARGL+D++AR GQ GPRSQKQ+KGF
Sbjct:  780 MEKLCGDLYDRLLEPMRQAALMAGATLGGEVAPDALGGQLVDALGDGGEKAAMEVLMRDQELAAADAEGMESEKEKLAALMRERAMTGRKVSKARSMYSKNLNAVRKRNPGLKIREFPQGRSIQEVVMVGGATRMPSIRRLVAAVTGITPRTTVDPDEAVALGAGIHAGVLDGIIEDMDMLTPMQAAIARGLLDYEARAGQAGPRSQKQRKGF 992          
BLAST of NO13G01190 vs. NCBI_GenBank
Match: XP_005830505.1 (hsp70, chloroplastic [Guillardia theta CCMP2712] >EKX43525.1 hsp70, chloroplastic [Guillardia theta CCMP2712])

HSP 1 Score: 105.1 bits (261), Expect = 2.600e-19
Identity = 64/189 (33.86%), Postives = 106/189 (56.08%), Query Frame = 0
Query:    1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGGQLIGSMEEGGKGIVREVMMRELAEMDGEEMVSDKKKLAELMRERALKGRQVSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARG 190
            +E +C  L+DRL  P+RQ ALM+G  L GE+                     ++V     A++  + +  D K L    +++  + R+              V+KR  G+++R+FP GR + EV++VGG T+MPS+  L+  +TG   + T++PDEAV+LGA I AG++DG I+  ++++P+QAA+ RG
Sbjct:  362 IESMCKPLFDRLAVPVRQVALMSGIELQGELM--------------DWNNAAKDVTETVTAQVGSDPL--DYKAL----KKQQSQDRKNXXXXXXXXXXXQKVQKRVGGIRLRKFPAGRRLSEVILVGGGTKMPSVTNLIRTMTGLTAKKTIDPDEAVSLGAAIQAGMMDGLIQGFEVLSPLQAALLRG 530          
BLAST of NO13G01190 vs. NCBI_GenBank
Match: CBJ33647.1 (Heat shock protein 70 [Ectocarpus siliculosus])

HSP 1 Score: 87.8 bits (216), Expect = 4.400e-14
Identity = 65/189 (34.39%), Postives = 97/189 (51.32%), Query Frame = 0
Query:    1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGGQLIGSMEEGGKGIVREVMMRELAEMDGEEMVSDKKKLAELMRERALKGRQVSKARSNYNKNLNAVRKRNPGLKIREFPQ-GRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIAR 189
            ME L ++   R++ PMR+ A+MA  +L     P   G  +   +E+  +  +RE +     E    +  S +K   E                                 K+R FPQ GR++++VV+VGGATRMP +QRLV  +TG KP+ TV+PD AVALGA   AG+L+G +E  ++MT  QA++ R
Sbjct:  529 MESLIMEPLKRVMAPMREVAIMADISL-----PADTGAFMDYDLEDSRE--LREGVSSGGGEAAERQGGSLRKLRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRRFPQGGRMVDKVVLVGGATRMPCVQRLVGGITGVKPKRTVDPDRAVALGAAAFAGILEGEVEGQEVMTSWQASVYR 710          
BLAST of NO13G01190 vs. NCBI_GenBank
Match: GAX22013.1 (hypothetical protein FisN_6Hh260 [Fistulifera solaris])

HSP 1 Score: 85.5 bits (210), Expect = 2.200e-13
Identity = 70/216 (32.41%), Postives = 108/216 (50.00%), Query Frame = 0
Query:    1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGGQLIGSMEEGGKGIVREVMMRELA--------EMDGEEMVSDKKKLAELMRERALKGRQVSKA------------RSNYNKNLNAVRKRNPGL-----KIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDM-DMMTPMQAAIARGL 191
            +E LC +    LL+P+R+ A++AGA L G+  P A+  +    MEE      + +  R++         E + E+   +  +L   +++  +K  +                   Y +    ++     +     K+R+   GR I  VV+VGG TRMP+I RL+ A+TG  P+ TVNPDEAVALG     GVLDG IE M  ++ PMQAAI + +
Sbjct:  389 LEKLCDNELQALLRPIREVAIVAGALLPGDANPTAV--EAARDMEE------QYIESRDMEFADFYPDNEQEDEQPAEENAELLLAIQDMDMKAAKXXXXXXXXXXXXXXXDERKYREEKKKIQTSTAAMDMDRVKVRDGISGRPISRVVLVGGTTRMPAIGRLIAALTGVVPQRTVNPDEAVALGCAAKVGVLDG-IEGMGTVLNPMQAAILKAV 595          
BLAST of NO13G01190 vs. NCBI_GenBank
Match: GAX09369.1 (hypothetical protein FisN_6Lh260 [Fistulifera solaris])

HSP 1 Score: 82.0 bits (201), Expect = 2.400e-12
Identity = 69/218 (31.65%), Postives = 102/218 (46.79%), Query Frame = 0
Query:    1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGG------QLIGSMEEGGKGIVREV-------------MMRELAEMD---GEEMVSDKKKLAELMRERALKGRQVSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARGLMDFQAR 197
            +E LC +    LL+P+R+ A++AGA L G+  P A+        Q I S +       ++V             ++  + +MD    +                     +  K   N N  ++  R     +K+R+   GR I  VV+VGG TRMP+I RL+  +TG  P+ TVNPDEAVALG     GVLDG  E   ++ PMQAAI + +   Q +
Sbjct:  389 LEKLCDNELQALLRPIREVAIVAGALLPGDANPTAVEAARDMEEQYIESRDMEFADFYQDVEXXXXXXXXXXXELLLAIQDMDMKAAKXXXXXXXXXXXXXXXXXXXXXEEKKKIQNSNTGMDMDR-----VKVRDGISGRPISRVVLVGGTTRMPAIGRLIATLTGVVPQRTVNPDEAVALGCAAKVGVLDGIEEMGTVLNPMQAAILKAVARQQGK 601          
BLAST of NO13G01190 vs. NCBI_GenBank
Match: XP_003081378.2 (Heat shock protein 70 family [Ostreococcus tauri] >CEF99195.1 Heat shock protein 70 family [Ostreococcus tauri])

HSP 1 Score: 80.5 bits (197), Expect = 7.000e-12
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 0
Query:   59 ELAEMDGEEMVSDKKKLAELMRERALKGRQ-VSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVT-VNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARGLM 192
            E+   DG ++V  +  L +L+ +   + R+ V+ A  +   +L A+ +            GR  +++++VGGATR P ++R V    GR+P V+ VNPDEAVALGA IHAG L+GTIE++  +  MQA++ R LM
Sbjct:  328 EVPMPDGGKVVMTRNLLEKLVIDVLRRMREPVAAAADSAGVDLEAIMENAKKKDGASRAAGRPFDQILLVGGATRSPFVRRFVANTLGREPNVSLVNPDEAVALGAAIHAGSLEGTIENVQTLNSMQASLMRALM 462          
BLAST of NO13G01190 vs. NCBI_GenBank
Match: OUS48763.1 (Hsp70 protein-domain-containing protein [Ostreococcus tauri])

HSP 1 Score: 80.5 bits (197), Expect = 7.000e-12
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 0
Query:   59 ELAEMDGEEMVSDKKKLAELMRERALKGRQ-VSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVT-VNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARGLM 192
            E+   DG ++V  +  L +L+ +   + R+ V+ A  +   +L A+ +            GR  +++++VGGATR P ++R V    GR+P V+ VNPDEAVALGA IHAG L+GTIE++  +  MQA++ R LM
Sbjct: 1919 EVPMPDGGKVVMTRNLLEKLVIDVLRRMREPVAAAADSAGVDLEAIMENAKKKDGASRAAGRPFDQILLVGGATRSPFVRRFVANTLGREPNVSLVNPDEAVALGAAIHAGSLEGTIENVQTLNSMQASLMRALM 2053          
BLAST of NO13G01190 vs. NCBI_GenBank
Match: XP_008792217.1 (PREDICTED: LOW QUALITY PROTEIN: stromal 70 kDa heat shock-related protein, chloroplastic-like [Phoenix dactylifera])

HSP 1 Score: 80.1 bits (196), Expect = 9.100e-12
Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 0
Query:  121 IEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMM--TPMQAAI 187
            I+EV++VGG+TRMP++Q LV+ +TG++P VTVNPDE VALGA + AGVL G + D+ ++  TP+   +
Sbjct:  397 IDEVILVGGSTRMPAVQELVKKITGKEPNVTVNPDEVVALGAAVQAGVLSGDVSDIVLLDVTPLSLGL 464          
BLAST of NO13G01190 vs. NCBI_GenBank
Match: PJE76549.1 (molecular chaperone DnaK [Candidatus Uhrbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_48_16])

HSP 1 Score: 79.3 bits (194), Expect = 1.600e-11
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = 0
Query:  121 IEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMM--TPMQAAI 187
            IEE+VMVGG TRMP +Q++VE   G+KP VTVNPDE VA+GA + AGVL G ++D+ ++  TP+   I
Sbjct:  328 IEEIVMVGGMTRMPLVQKVVEEFFGKKPNVTVNPDEVVAMGASVQAGVLQGEVKDVLLLDVTPLSVGI 395          
BLAST of NO13G01190 vs. NCBI_GenBank
Match: YP_009093097.1 (heat shock protein 70 (chloroplast) [Rhizosolenia imbricata] >AIR75770.1 heat shock protein 70 (chloroplast) [Rhizosolenia imbricata])

HSP 1 Score: 79.0 bits (193), Expect = 2.000e-11
Identity = 37/68 (54.41%), Postives = 53/68 (77.94%), Query Frame = 0
Query:  121 IEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMM--TPMQAAI 187
            I E+V+VGG+TR+P+IQ LVE++TG+KP  TVNPDE VA+GA I AG+L G I+D+ ++  TP+   +
Sbjct:  329 INEIVLVGGSTRIPAIQNLVESITGKKPNQTVNPDEVVAIGAAIQAGILAGEIKDILLLDVTPLSLGV 396          
The following BLAST results are available for this feature:
BLAST of NO13G01190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21791.14.100e-8177.93chaperone protein [Nannochloropsis gaditana][more]
XP_005830505.12.600e-1933.86hsp70, chloroplastic [Guillardia theta CCMP2712] >... [more]
CBJ33647.14.400e-1434.39Heat shock protein 70 [Ectocarpus siliculosus][more]
GAX22013.12.200e-1332.41hypothetical protein FisN_6Hh260 [Fistulifera sola... [more]
GAX09369.12.400e-1231.65hypothetical protein FisN_6Lh260 [Fistulifera sola... [more]
XP_003081378.27.000e-1238.52Heat shock protein 70 family [Ostreococcus tauri] ... [more]
OUS48763.17.000e-1238.52Hsp70 protein-domain-containing protein [Ostreococ... [more]
XP_008792217.19.100e-1252.94PREDICTED: LOW QUALITY PROTEIN: stromal 70 kDa hea... [more]
PJE76549.11.600e-1155.88molecular chaperone DnaK [Candidatus Uhrbacteria b... [more]
YP_009093097.12.000e-1154.41heat shock protein 70 (chloroplast) [Rhizosolenia ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01190.1NO13G01190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01190.1NO13G01190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01190 ID=NO13G01190|Name=NO13G01190|organism=Nannochloropsis oceanica|type=gene|length=636bp
ATGGAGGGGTTGTGTGTAGACTTGTACGACCGGTTATTACAGCCGATGAG
GCAGGCGGCGTTGATGGCGGGAGCAACATTGGCGGGGGAGGTGGCCCCGG
ATGCGCTGGGAGGGCAGTTGATTGGTTCAATGGAGGAGGGGGGGAAGGGT
ATCGTGAGGGAGGTGATGATGAGGGAGCTGGCGGAAATGGATGGGGAGGA
GATGGTGAGTGATAAGAAGAAGCTGGCAGAACTCATGAGGGAGAGAGCAT
TGAAAGGGCGGCAAGTGAGTAAGGCCCGGAGCAATTACAACAAGAATTTG
AATGCGGTAAGGAAAAGAAACCCGGGGTTGAAGATAAGGGAGTTCCCGCA
GGGGAGAGTGATCGAGGAGGTGGTTATGGTGGGAGGGGCGACCAGGATGC
CCTCGATACAGCGCTTGGTTGAAGCAGTCACGGGGCGAAAGCCGCGTGTA
ACGGTTAATCCTGACGAGGCCGTTGCTCTCGGGGCGGGAATTCATGCGGG
GGTGCTGGATGGGACGATTGAGGATATGGATATGATGACTCCGATGCAGG
CTGCAATCGCGAGAGGGTTGATGGACTTCCAGGCACGAGGAGGACAGAAA
GGCCCTCGGTCACAGAAGCAGAAAAAGGGCTTTTAG
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protein sequence of NO13G01190.1

>NO13G01190.1-protein ID=NO13G01190.1-protein|Name=NO13G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=212bp
MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGGQLIGSMEEGGKG
IVREVMMRELAEMDGEEMVSDKKKLAELMRERALKGRQVSKARSNYNKNL
NAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRV
TVNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARGLMDFQARGGQK
GPRSQKQKKGF*
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Synonyms
Publications