NO13G01190, NO13G01190 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01190 vs. NCBI_GenBank
Match: EWM21791.1 (chaperone protein [Nannochloropsis gaditana]) HSP 1 Score: 310.5 bits (794), Expect = 4.100e-81 Identity = 166/213 (77.93%), Postives = 186/213 (87.32%), Query Frame = 0
Query: 1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGGQLIGSMEEGGKGIVREVMMR--ELAEMDGEEMVSDKKKLAELMRERALKGRQVSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARGLMDFQARGGQKGPRSQKQKKGF 212
ME LC DLYDRLL+PMRQAALMAGATL GEVAPDALGGQL+ ++ +GG+ EV+MR ELA D E M S+K+KLA LMRERA+ GR+VSKARS Y+KNLNAVRKRNPGLKIREFPQGR I+EVVMVGGATRMPSI+RLV AVTG PR TV+PDEAVALGAGIHAGVLDG IEDMDM+TPMQAAIARGL+D++AR GQ GPRSQKQ+KGF
Sbjct: 780 MEKLCGDLYDRLLEPMRQAALMAGATLGGEVAPDALGGQLVDALGDGGEKAAMEVLMRDQELAAADAEGMESEKEKLAALMRERAMTGRKVSKARSMYSKNLNAVRKRNPGLKIREFPQGRSIQEVVMVGGATRMPSIRRLVAAVTGITPRTTVDPDEAVALGAGIHAGVLDGIIEDMDMLTPMQAAIARGLLDYEARAGQAGPRSQKQRKGF 992
BLAST of NO13G01190 vs. NCBI_GenBank
Match: XP_005830505.1 (hsp70, chloroplastic [Guillardia theta CCMP2712] >EKX43525.1 hsp70, chloroplastic [Guillardia theta CCMP2712]) HSP 1 Score: 105.1 bits (261), Expect = 2.600e-19 Identity = 64/189 (33.86%), Postives = 106/189 (56.08%), Query Frame = 0
Query: 1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGGQLIGSMEEGGKGIVREVMMRELAEMDGEEMVSDKKKLAELMRERALKGRQVSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARG 190
+E +C L+DRL P+RQ ALM+G L GE+ ++V A++ + + D K L +++ + R+ V+KR G+++R+FP GR + EV++VGG T+MPS+ L+ +TG + T++PDEAV+LGA I AG++DG I+ ++++P+QAA+ RG
Sbjct: 362 IESMCKPLFDRLAVPVRQVALMSGIELQGELM--------------DWNNAAKDVTETVTAQVGSDPL--DYKAL----KKQQSQDRKNXXXXXXXXXXXQKVQKRVGGIRLRKFPAGRRLSEVILVGGGTKMPSVTNLIRTMTGLTAKKTIDPDEAVSLGAAIQAGMMDGLIQGFEVLSPLQAALLRG 530
BLAST of NO13G01190 vs. NCBI_GenBank
Match: CBJ33647.1 (Heat shock protein 70 [Ectocarpus siliculosus]) HSP 1 Score: 87.8 bits (216), Expect = 4.400e-14 Identity = 65/189 (34.39%), Postives = 97/189 (51.32%), Query Frame = 0
Query: 1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGGQLIGSMEEGGKGIVREVMMRELAEMDGEEMVSDKKKLAELMRERALKGRQVSKARSNYNKNLNAVRKRNPGLKIREFPQ-GRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIAR 189
ME L ++ R++ PMR+ A+MA +L P G + +E+ + +RE + E + S +K E K+R FPQ GR++++VV+VGGATRMP +QRLV +TG KP+ TV+PD AVALGA AG+L+G +E ++MT QA++ R
Sbjct: 529 MESLIMEPLKRVMAPMREVAIMADISL-----PADTGAFMDYDLEDSRE--LREGVSSGGGEAAERQGGSLRKLRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRRFPQGGRMVDKVVLVGGATRMPCVQRLVGGITGVKPKRTVDPDRAVALGAAAFAGILEGEVEGQEVMTSWQASVYR 710
BLAST of NO13G01190 vs. NCBI_GenBank
Match: GAX22013.1 (hypothetical protein FisN_6Hh260 [Fistulifera solaris]) HSP 1 Score: 85.5 bits (210), Expect = 2.200e-13 Identity = 70/216 (32.41%), Postives = 108/216 (50.00%), Query Frame = 0
Query: 1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGGQLIGSMEEGGKGIVREVMMRELA--------EMDGEEMVSDKKKLAELMRERALKGRQVSKA------------RSNYNKNLNAVRKRNPGL-----KIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDM-DMMTPMQAAIARGL 191
+E LC + LL+P+R+ A++AGA L G+ P A+ + MEE + + R++ E + E+ + +L +++ +K + Y + ++ + K+R+ GR I VV+VGG TRMP+I RL+ A+TG P+ TVNPDEAVALG GVLDG IE M ++ PMQAAI + +
Sbjct: 389 LEKLCDNELQALLRPIREVAIVAGALLPGDANPTAV--EAARDMEE------QYIESRDMEFADFYPDNEQEDEQPAEENAELLLAIQDMDMKAAKXXXXXXXXXXXXXXXDERKYREEKKKIQTSTAAMDMDRVKVRDGISGRPISRVVLVGGTTRMPAIGRLIAALTGVVPQRTVNPDEAVALGCAAKVGVLDG-IEGMGTVLNPMQAAILKAV 595
BLAST of NO13G01190 vs. NCBI_GenBank
Match: GAX09369.1 (hypothetical protein FisN_6Lh260 [Fistulifera solaris]) HSP 1 Score: 82.0 bits (201), Expect = 2.400e-12 Identity = 69/218 (31.65%), Postives = 102/218 (46.79%), Query Frame = 0
Query: 1 MEGLCVDLYDRLLQPMRQAALMAGATLAGEVAPDALGG------QLIGSMEEGGKGIVREV-------------MMRELAEMD---GEEMVSDKKKLAELMRERALKGRQVSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARGLMDFQAR 197
+E LC + LL+P+R+ A++AGA L G+ P A+ Q I S + ++V ++ + +MD + + K N N ++ R +K+R+ GR I VV+VGG TRMP+I RL+ +TG P+ TVNPDEAVALG GVLDG E ++ PMQAAI + + Q +
Sbjct: 389 LEKLCDNELQALLRPIREVAIVAGALLPGDANPTAVEAARDMEEQYIESRDMEFADFYQDVEXXXXXXXXXXXELLLAIQDMDMKAAKXXXXXXXXXXXXXXXXXXXXXEEKKKIQNSNTGMDMDR-----VKVRDGISGRPISRVVLVGGTTRMPAIGRLIATLTGVVPQRTVNPDEAVALGCAAKVGVLDGIEEMGTVLNPMQAAILKAVARQQGK 601
BLAST of NO13G01190 vs. NCBI_GenBank
Match: XP_003081378.2 (Heat shock protein 70 family [Ostreococcus tauri] >CEF99195.1 Heat shock protein 70 family [Ostreococcus tauri]) HSP 1 Score: 80.5 bits (197), Expect = 7.000e-12 Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 0
Query: 59 ELAEMDGEEMVSDKKKLAELMRERALKGRQ-VSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVT-VNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARGLM 192
E+ DG ++V + L +L+ + + R+ V+ A + +L A+ + GR +++++VGGATR P ++R V GR+P V+ VNPDEAVALGA IHAG L+GTIE++ + MQA++ R LM
Sbjct: 328 EVPMPDGGKVVMTRNLLEKLVIDVLRRMREPVAAAADSAGVDLEAIMENAKKKDGASRAAGRPFDQILLVGGATRSPFVRRFVANTLGREPNVSLVNPDEAVALGAAIHAGSLEGTIENVQTLNSMQASLMRALM 462
BLAST of NO13G01190 vs. NCBI_GenBank
Match: OUS48763.1 (Hsp70 protein-domain-containing protein [Ostreococcus tauri]) HSP 1 Score: 80.5 bits (197), Expect = 7.000e-12 Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 0
Query: 59 ELAEMDGEEMVSDKKKLAELMRERALKGRQ-VSKARSNYNKNLNAVRKRNPGLKIREFPQGRVIEEVVMVGGATRMPSIQRLVEAVTGRKPRVT-VNPDEAVALGAGIHAGVLDGTIEDMDMMTPMQAAIARGLM 192
E+ DG ++V + L +L+ + + R+ V+ A + +L A+ + GR +++++VGGATR P ++R V GR+P V+ VNPDEAVALGA IHAG L+GTIE++ + MQA++ R LM
Sbjct: 1919 EVPMPDGGKVVMTRNLLEKLVIDVLRRMREPVAAAADSAGVDLEAIMENAKKKDGASRAAGRPFDQILLVGGATRSPFVRRFVANTLGREPNVSLVNPDEAVALGAAIHAGSLEGTIENVQTLNSMQASLMRALM 2053
BLAST of NO13G01190 vs. NCBI_GenBank
Match: XP_008792217.1 (PREDICTED: LOW QUALITY PROTEIN: stromal 70 kDa heat shock-related protein, chloroplastic-like [Phoenix dactylifera]) HSP 1 Score: 80.1 bits (196), Expect = 9.100e-12 Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 0
Query: 121 IEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMM--TPMQAAI 187
I+EV++VGG+TRMP++Q LV+ +TG++P VTVNPDE VALGA + AGVL G + D+ ++ TP+ +
Sbjct: 397 IDEVILVGGSTRMPAVQELVKKITGKEPNVTVNPDEVVALGAAVQAGVLSGDVSDIVLLDVTPLSLGL 464
BLAST of NO13G01190 vs. NCBI_GenBank
Match: PJE76549.1 (molecular chaperone DnaK [Candidatus Uhrbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_48_16]) HSP 1 Score: 79.3 bits (194), Expect = 1.600e-11 Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = 0
Query: 121 IEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMM--TPMQAAI 187
IEE+VMVGG TRMP +Q++VE G+KP VTVNPDE VA+GA + AGVL G ++D+ ++ TP+ I
Sbjct: 328 IEEIVMVGGMTRMPLVQKVVEEFFGKKPNVTVNPDEVVAMGASVQAGVLQGEVKDVLLLDVTPLSVGI 395
BLAST of NO13G01190 vs. NCBI_GenBank
Match: YP_009093097.1 (heat shock protein 70 (chloroplast) [Rhizosolenia imbricata] >AIR75770.1 heat shock protein 70 (chloroplast) [Rhizosolenia imbricata]) HSP 1 Score: 79.0 bits (193), Expect = 2.000e-11 Identity = 37/68 (54.41%), Postives = 53/68 (77.94%), Query Frame = 0
Query: 121 IEEVVMVGGATRMPSIQRLVEAVTGRKPRVTVNPDEAVALGAGIHAGVLDGTIEDMDMM--TPMQAAI 187
I E+V+VGG+TR+P+IQ LVE++TG+KP TVNPDE VA+GA I AG+L G I+D+ ++ TP+ +
Sbjct: 329 INEIVLVGGSTRIPAIQNLVESITGKKPNQTVNPDEVVAIGAAIQAGILAGEIKDILLLDVTPLSLGV 396 The following BLAST results are available for this feature:
BLAST of NO13G01190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01190 ID=NO13G01190|Name=NO13G01190|organism=Nannochloropsis oceanica|type=gene|length=636bpback to top protein sequence of NO13G01190.1 >NO13G01190.1-protein ID=NO13G01190.1-protein|Name=NO13G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=212bpback to top Synonyms
Publications
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