NO13G00800, NO13G00800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00800 vs. NCBI_GenBank
Match: XP_005853828.1 (large subunit ribosomal protein L26e [Nannochloropsis gaditana CCMP526] >EKU22531.1 large subunit ribosomal protein L26e [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 360.1 bits (923), Expect = 5.100e-96 Identity = 189/215 (87.91%), Postives = 201/215 (93.49%), Query Frame = 0 Query: 24 IGRRSLLFVAAAALCAGLCAAFVPGAPLPSSAISVTSTIRRETIVMGNHRSSQAARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRAELAARKNSLKIAEPGQDPAWTEYQTTLTSILDGSA 239 +GRRSL+ V AA+CAGLC AFVP APLPS A S +ST RR+TIVMGNHRSSQAARRRTSFLKHVKAPLH RRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREK+G KEAGKTSTTIPVPIRASSV+ITKLYLD SREAILKR+A GRAELAARKN++++AEPGQDPAW EYQTTLTSILDGSA Sbjct: 1 MGRRSLVLVTVAAICAGLCTAFVPSAPLPSCA-SGSSTSRRQTIVMGNHRSSQAARRRTSFLKHVKAPLHKRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKAGGKEAGKTSTTIPVPIRASSVRITKLYLDKSREAILKRRAEGRAELAARKNNIQLAEPGQDPAWAEYQTTLTSILDGSA 214
BLAST of NO13G00800 vs. NCBI_GenBank
Match: EWM21749.1 (60s ribosomal protein l26 [Nannochloropsis gaditana]) HSP 1 Score: 360.1 bits (923), Expect = 5.100e-96 Identity = 189/215 (87.91%), Postives = 201/215 (93.49%), Query Frame = 0 Query: 24 IGRRSLLFVAAAALCAGLCAAFVPGAPLPSSAISVTSTIRRETIVMGNHRSSQAARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRAELAARKNSLKIAEPGQDPAWTEYQTTLTSILDGSA 239 +GRRSL+ V AA+CAGLC AFVP APLPS A S +ST RR+TIVMGNHRSSQAARRRTSFLKHVKAPLH RRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREK+G KEAGKTSTTIPVPIRASSV+ITKLYLD SREAILKR+A GRAELAARKN++++AEPGQDPAW EYQTTLTSILDGSA Sbjct: 45 MGRRSLVLVTVAAICAGLCTAFVPSAPLPSCA-SGSSTSRRQTIVMGNHRSSQAARRRTSFLKHVKAPLHKRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKAGGKEAGKTSTTIPVPIRASSVRITKLYLDKSREAILKRRAEGRAELAARKNNIQLAEPGQDPAWAEYQTTLTSILDGSA 258
BLAST of NO13G00800 vs. NCBI_GenBank
Match: XP_008030388.1 (hypothetical protein SETTUDRAFT_97180 [Setosphaeria turcica Et28A] >EOA82059.1 hypothetical protein SETTUDRAFT_97180 [Setosphaeria turcica Et28A]) HSP 1 Score: 116.3 bits (290), Expect = 1.300e-22 Identity = 70/132 (53.03%), Postives = 86/132 (65.15%), Query Frame = 0 Query: 73 RSSQAARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRAE 205 +S A+ RR S H AP RR IMS+PLSKELR +H GVRSIP+R DE+ V G ++ + GKV V R KY IHV GI REKS + ++P+PI AS V ITKL LD RE+IL+RK+AGR E Sbjct: 5 QSMVASSRRKSRKAHFSAPSSVRRVIMSAPLSKELREKH-GVRSIPIRKDDEITVVRGSNKGREGKVSSVYRLKYCIHVNGIVREKSNGQ-------SVPIPIAASKVVITKLKLDKDRESILERKSAGREE 128
BLAST of NO13G00800 vs. NCBI_GenBank
Match: XP_007687056.1 (hypothetical protein COCMIDRAFT_92753 [Bipolaris oryzae ATCC 44560] >EUC46434.1 hypothetical protein COCMIDRAFT_92753 [Bipolaris oryzae ATCC 44560]) HSP 1 Score: 115.9 bits (289), Expect = 1.700e-22 Identity = 70/132 (53.03%), Postives = 86/132 (65.15%), Query Frame = 0 Query: 73 RSSQAARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRAE 205 +S A+ RR S H AP RR IMS+PLSKELR +H GVRSIP+R DE+ V G ++ + GKV V R KY IHV GI REKS + ++P+PI AS V ITKL LD RE+IL+RK+AGR E Sbjct: 5 QSLVASSRRKSRKAHFSAPSSVRRVIMSAPLSKELREKH-GVRSIPIRKDDEITVVRGSNKGREGKVSSVYRLKYCIHVNGIVREKSNGQ-------SVPIPIAASKVVITKLKLDKDRESILERKSAGREE 128
BLAST of NO13G00800 vs. NCBI_GenBank
Match: XP_003836074.1 (similar to 60S ribosomal protein L26 [Leptosphaeria maculans JN3] >CBX92709.1 similar to 60S ribosomal protein L26 [Leptosphaeria maculans JN3]) HSP 1 Score: 114.4 bits (285), Expect = 4.900e-22 Identity = 70/140 (50.00%), Postives = 88/140 (62.86%), Query Frame = 0 Query: 69 MGNHRSSQAARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRAELAAR 209 M ++ A+ RR S H AP RR IMS+PLSKELR +H GVRSIPVR DE++V G ++ + GK+ V R KY +HV GI REKS + ++P+PI S V ITKL LD RE IL+RK+AGRAE R Sbjct: 1 MAKVQAQLASSRRKSRKAHFSAPSSVRRVIMSAPLSKELREKH-GVRSIPVRKDDEIMVVRGSNKGREGKIQSVYRLKYCLHVAGIVREKSNGQ-------SVPIPIAPSKVVITKLKLDKDREQILERKSAGRAEKKKR 132
BLAST of NO13G00800 vs. NCBI_GenBank
Match: XP_007713820.1 (hypothetical protein COCCADRAFT_100136 [Bipolaris zeicola 26-R-13] >XP_014559411.1 hypothetical protein COCVIDRAFT_35447 [Bipolaris victoriae FI3] >EUC31867.1 hypothetical protein COCCADRAFT_100136 [Bipolaris zeicola 26-R-13] >EUN29823.1 hypothetical protein COCVIDRAFT_35447 [Bipolaris victoriae FI3]) HSP 1 Score: 114.4 bits (285), Expect = 4.900e-22 Identity = 69/132 (52.27%), Postives = 85/132 (64.39%), Query Frame = 0 Query: 73 RSSQAARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRAE 205 +S A+ RR S H AP RR IMS+PLSKELR +H GVRSIP+R DE+ V G ++ + GKV V R KY IHV GI REKS + ++P+PI S V ITKL LD RE+IL+RK+AGR E Sbjct: 5 QSMVASSRRKSRKAHFSAPSSVRRVIMSAPLSKELREKH-GVRSIPIRKDDEITVVRGSNKGREGKVSSVYRLKYCIHVNGIVREKSNGQ-------SVPIPIAPSKVVITKLKLDKDRESILERKSAGREE 128
BLAST of NO13G00800 vs. NCBI_GenBank
Match: XP_014082578.1 (hypothetical protein COCC4DRAFT_30433 [Bipolaris maydis ATCC 48331] >EMD91574.1 hypothetical protein COCHEDRAFT_1021505 [Bipolaris maydis C5] >ENI08669.1 hypothetical protein COCC4DRAFT_30433 [Bipolaris maydis ATCC 48331]) HSP 1 Score: 114.0 bits (284), Expect = 6.400e-22 Identity = 69/132 (52.27%), Postives = 84/132 (63.64%), Query Frame = 0 Query: 73 RSSQAARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRAE 205 +S A+ RR S H AP RR IMS+PLSKELR +H GVRSIP+R DE+ V G ++ + GKV V R KY IHV GI REKS + ++P+PI S V ITKL LD RE IL+RK+AGR E Sbjct: 5 QSMVASSRRKSRKAHFSAPSSVRRVIMSAPLSKELREKH-GVRSIPIRKDDEITVVRGSNKGREGKVSSVYRLKYCIHVNGIVREKSNGQ-------SVPIPIAPSKVVITKLKLDKDRETILERKSAGREE 128
BLAST of NO13G00800 vs. NCBI_GenBank
Match: XP_001930861.1 (60S ribosomal protein L26 [Pyrenophora tritici-repentis Pt-1C-BFP] >EDU39966.1 conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] >EFQ88250.1 hypothetical protein PTT_15978 [Pyrenophora teres f. teres 0-1]) HSP 1 Score: 114.0 bits (284), Expect = 6.400e-22 Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 0 Query: 73 RSSQAARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRAE 205 +S A+ RR S H AP RR IMS+PLSKELR +H GVRSIP+R DE+ V G ++ + GKV V R KY IHV GI REKS + ++P+PI S V +TKL LD RE+IL+RK+AGR E Sbjct: 5 QSMVASSRRKSRKAHFSAPSSVRRVIMSAPLSKELREKH-GVRSIPIRKDDEITVVRGSNKGREGKVSSVYRLKYCIHVNGIVREKSNGQ-------SVPIPIAPSKVVVTKLKLDKDRESILERKSAGREE 128
BLAST of NO13G00800 vs. NCBI_GenBank
Match: ORZ41287.1 (translation protein SH3-like domain-containing protein, partial [Catenaria anguillulae PL171]) HSP 1 Score: 113.6 bits (283), Expect = 8.400e-22 Identity = 65/127 (51.18%), Postives = 87/127 (68.50%), Query Frame = 0 Query: 77 AARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRA 204 ++ RR S H AP H RR IMS+PL+KELR +H VRS+P+R DEV+V G+ + + GKV+ V RKKY IH+E ITR+K T++PV I S+V ITKL+LD R+A+L+RKAAG+A Sbjct: 3 SSSRRKSRKAHFTAPSHVRRVIMSAPLAKELREKH-NVRSMPIRKDDEVLVVRGNFKSQTGKVVQVYRKKYVIHIERITRDK-------VNGTSVPVGIHPSNVVITKLHLDKDRKALLERKAAGKA 121
BLAST of NO13G00800 vs. NCBI_GenBank
Match: XP_007702866.1 (hypothetical protein COCSADRAFT_344402 [Bipolaris sorokiniana ND90Pr] >EMD61552.1 hypothetical protein COCSADRAFT_344402 [Bipolaris sorokiniana ND90Pr]) HSP 1 Score: 113.2 bits (282), Expect = 1.100e-21 Identity = 69/132 (52.27%), Postives = 84/132 (63.64%), Query Frame = 0 Query: 73 RSSQAARRRTSFLKHVKAPLHTRRTIMSSPLSKELRAEHGGVRSIPVRTGDEVVVTAGDHRKKVGKVIGVDRKKYYIHVEGITREKSGAKEAGKTSTTIPVPIRASSVKITKLYLDASREAILKRKAAGRAE 205 +S A+ RR S H AP RR IMS+PLSKELR +H GVRSIP+R DE+ V G ++ + GKV V R KY IHV GI REKS + ++P PI S V ITKL LD RE+IL+RK+AGR E Sbjct: 5 QSMVASSRRKSRKAHFSAPSSVRRVIMSAPLSKELREKH-GVRSIPIRKDDEITVVRGSNKGREGKVSSVYRLKYCIHVNGIVREKSNGQ-------SVPTPIAPSKVVITKLKLDKDRESILERKSAGREE 128 The following BLAST results are available for this feature:
BLAST of NO13G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00800 ID=NO13G00800|Name=NO13G00800|organism=Nannochloropsis oceanica|type=gene|length=2989bpback to top protein sequence of NO13G00800.1 >NO13G00800.1-protein ID=NO13G00800.1-protein|Name=NO13G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=239bpback to top Synonyms
Publications
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