NO13G00520, NO13G00520 (gene) Nannochloropsis oceanica

Overview
NameNO13G00520
Unique NameNO13G00520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3936
Alignment locationchr13:179131..183066 -

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquitin carboxyl-terminal hydrolase 31
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:179131..183066 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0008270zinc ion binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR028889USP_dom
IPR001394Peptidase_C19_UCH
IPR001607Znf_UBP
Homology
BLAST of NO13G00520 vs. NCBI_GenBank
Match: EWM21721.1 (ubiquitin carboxyl-terminal hydrolase 22 [Nannochloropsis gaditana])

HSP 1 Score: 227.3 bits (578), Expect = 2.400e-55
Identity = 136/271 (50.18%), Postives = 161/271 (59.41%), Query Frame = 0
Query:  162 DRSLADAILKEKEDILICLQCGHKGCRQRSHIDGHFVSSNHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDLLRNVWAQARQDAITRDCSSKIGYRSRSRSSRNSSNSGSLLSLPPALRPSLFTWSHLSQPTTLSHAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCSKHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRN----------DHGXXXXXXXXXXXXXXXXXXXPCLACELQELFLLV 423
            + S+ D ++KE+ED+L CLQCG++ CR+  HI+ HF+ +NHFLGV    PG  +G G G GG IFC  CGD VYDVEFDL+R +WAQAR                       SS+S SLL  PP+LRPSLFTW  L+QP+ + HA  GLRGF NLGSTCFM+CILQALLHNPVL+ FFLRR HSL +C K Q +  A  A +V     TG G  GGQ    G RN          D G                   PCLACELQELFLLV
Sbjct:   36 ESSVVDWVMKEREDMLYCLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEG-GDG-GGGIFCFLCGDNVYDVEFDLIRLLWAQAR-----------------------SSDSRSLLRRPPSLRPSLFTWPLLAQPSLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPKAQGSRKA--ATLVWEGDTTGGGKEGGQ---VGARNLKEPCAVHWPDRG-ERSNGERPGPTSSSFVTAPCLACELQELFLLV 275          
BLAST of NO13G00520 vs. NCBI_GenBank
Match: EWM22884.1 (ubiquitin carboxyl-terminal hydrolase 31 [Nannochloropsis gaditana])

HSP 1 Score: 217.2 bits (552), Expect = 2.500e-52
Identity = 120/239 (50.21%), Postives = 135/239 (56.49%), Query Frame = 0
Query:  869 DDLTLSHCLETYTSLETLSCPYRCGSCGGSSPSCSKQLTLHRLPNVLVLHLKRFDASSARKIEKFVGFPLKGLDMAPYVYEWRNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEIPYDLFAVCEHLGTSLQQGHYKAYVQEGAVEGKGXXXXXXWTPAWYVCNDTWVLPVSEEEVLRAQGYVLFYVRRGWSP 1108
            D+LTLSHCL+ YTS ETLSCPY+C SCG +S SCSKQLTLHRLPNV + H+KRFDA SARKIEKFV +P KGL+MAPY++ W NA                                                                           EI YDLFAV EH+G SLQQGHYKA+VQEG      XXXXXX  PAW VCNDTWV  VS E+VL AQ Y+LFY+RRGWSP
Sbjct:  192 DELTLSHCLDAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNA--------------------EMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQGHYKAFVQEGTXXXXXXXXXXXXXPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIRRGWSP 410          
BLAST of NO13G00520 vs. NCBI_GenBank
Match: CBJ28839.1 (Ubiquitin carboxyl-terminal hydrolase, putative [Ectocarpus siliculosus])

HSP 1 Score: 107.1 bits (266), Expect = 3.600e-19
Identity = 114/400 (28.50%), Postives = 149/400 (37.25%), Query Frame = 0
Query:  170 LKEKEDILICLQCGHKGCRQ--RSHIDGHFVSSNHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDL----------LRNVWAQARQDAITRDCSSKIGYRSRSRSSRNSSNSG----SLLSLPPALRPSLFTWSHLSQPTTLSHAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCSKHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRNDHGXXXXXXXXXXXXXXXXXXXPCLACELQELFLLVFSREPTMPTPVLLCRPLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFIHDTYNKSLTAAVANATAVANTPPCEPIVPHRLMQAMWSLASVEHLAGYEQQDAHEFLIALLDALHTDL 554
            L E +D+L CL+CG+  C    R H+  H ++            G+C    + E  EIFC+ C D+VYDVEFD           L   W                               G       S PP           L  P        G+RG +NLG+TCFM+ +LQA+LH  V+Q FF  + H    C K +  TT   + +++               G G+ +   XXXXXXXXX           C+ACEL  LF                                                                  HD ++    AA    T        EP VPHRL++A+WS +  E LAGYEQQDAHEFLIA+LD+LH  L
Sbjct:   21 LHEPDDVLTCLECGYTACGSPPRRHMLRHCLTQPG--------DGHCFAASR-ERAEIFCARCCDYVYDVEFDTAVSRVDDSFGLHTEWDNGGXXXXXXXXXXXXXXXXXXXXXXXXXGDGFYRVERASPPPV----------LLSPARSRLVAAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFSEKGHEPSRCEKLRKETTKLRSQILQYDSNASF----DNHPGAGRGSXXXXXXXXXXXXKMTIAKKIGEYCIACELARLF------------------------------------------------------------------HDMFSTEAAAATLGDT--------EPYVPHRLLEAVWSAS--EFLAGYEQQDAHEFLIAVLDSLHGHL 321          

HSP 2 Score: 76.3 bits (186), Expect = 6.900e-10
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0
Query:  872 TLSHCLETYTSLETLSCPYRCGSCGGSSPSCSKQLTLHRLPNVLVLHLKRFDASSARKIEKFVGFPLKGLDMAPYVYEW 951
            +++ C   + + E+L+    C SC  +S   +KQ++   LP VLVLHLKRFDA + RKI+ FV FP +GLDM  Y+  W
Sbjct:  906 SITDCFARFAARESLTVRMACDSCSAASVCKTKQMSFCSLPRVLVLHLKRFDAMADRKIDDFVSFPARGLDMGKYLTGW 984          
BLAST of NO13G00520 vs. NCBI_GenBank
Match: XP_004338330.1 (ubiquitin carboxylterminal hydrolase 22, putative [Acanthamoeba castellanii str. Neff] >ELR16317.1 ubiquitin carboxylterminal hydrolase 22, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 103.2 bits (256), Expect = 5.300e-18
Identity = 110/467 (23.55%), Postives = 153/467 (32.76%), Query Frame = 0
Query:  179 CLQCGHKGCRQRSHIDGHFVSSNHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDLLRNVWAQARQDAITRDCSSKIGYRSRSRSSRN--SSNSGSLLSLPPALRPSLFTWSHLSQPTTLSHAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCSKHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRNDHGXXXXXXXXXXXXXXXXXXXPCLACELQELFLLVFSREPTMPTPVLLCRPLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFIHDTYNKSLTAAVANATAVANTPPCEPIVPHRLMQAMWSLASVEHLAGYEQQDAHEFLIALLDALHTDLALXXXXXXXXXXXRSSSPTKPNPVGTFLSPSTVPALGDRKEGGREGEIEPSKVIHNAFRGTLRSDVVCSECQAVSTVFEPFLDLSLPLKK 644
            CL C   GC    H+  H    NH L V                G+++C  C D+VYD +F+L       A++ +       K+   S  +   N  + ++  +  L           S+ S+  T+   + GLRG YN+G+TCFMNCILQ+LLHNP+L+++FL   H+   CS                                  R+D                      CLACEL  LF  V+S                                                                     T A              P  P+  + +MW  A  ++LAGY+QQDAHEFLI+ L+ LH                                          K  G         ++H  F G LRSD+ C  C   ST  +PF D+SL L K
Sbjct:   96 CLHCVFVGCADGGHLAAHLAEHNHTLAVDV------------SHGQLYCGACKDYVYDRDFEL-----QAAKEQSTFSAVKQKLAEPSVKQVKYNVWAPSTDDINQL-----------SNNSKRCTVPSNLLGLRGLYNMGNTCFMNCILQSLLHNPLLRNYFLSDLHNRSGCS--------------------------------ANRDD---------------------ICLACELDYLFAEVYSG--------------------------------------------------------------------TGA--------------PYAPYHFLYSMWRHA--DNLAGYDQQDAHEFLISTLNGLH------------------------------------------KHSGGSTAASCRCIVHQIFSGRLRSDLTCLRCGYTSTAIDPFFDISLDLPK 355          
BLAST of NO13G00520 vs. NCBI_GenBank
Match: XP_022315213.1 (ubiquitin carboxyl-terminal hydrolase 22-like [Crassostrea virginica])

HSP 1 Score: 103.2 bits (256), Expect = 5.300e-18
Identity = 114/468 (24.36%), Postives = 150/468 (32.05%), Query Frame = 0
Query:  179 CLQCGHKGCRQRSHIDGHFVSSNHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDLLRNVWAQARQDAITRDCSSKIGYRSRSRSSRNSSNSGSLLSLPPALRPSLFTWSHLSQPTTLSHAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCSKHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRNDHGXXXXXXXXXXXXXXXXXXXPCLACELQELFLLVFSREPTMPTPVLLCRPLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFIHDTYNKSLTAAVANATAVANTPPCEPIVPHRLMQAMWSLASVEHLAGYEQQDAHEFLIALLDALHTDLALXXXXXXXXXXXRSSSPTKPNPVGTFLSPSTVPALGDRKEGGREGEIEPSK-----VIHNAFRGTLRSDVVCSECQAVSTVFEPFLDLSLPL 642
            CL C + GC    HI  H  S NH L                  G IFC  CGD+VYD E + +    AQ + +   +    K               S + +S  P          +  +    + +  GLRG  NLG+TCFMNCI+Q+L+H PVL+ FFL          KH    T+                       E Q+                        CL CE+  LF   +S   T                                                                                  P +P+RL+  +W+  +  HLAGYEQQDAHEFLIA LD LH                +  S  K   +  F +             GR G    +      +I   F G L+SDV C EC  VST  +P  D+SL L
Sbjct:   59 CLHCVYFGCYTTKHIHEHAFSKNHNLAADMTY------------GTIFCFECGDYVYDKELESI----AQIQNEKAAKSLGLK---------------SYNFISWEPTEVEVEILRQNPKRRKVENKSTIGLRGLINLGNTCFMNCIVQSLIHTPVLRDFFL--------ADKHNCQMTSV----------------------EAQQ------------------------CLVCEMARLFQEFYSGNRT----------------------------------------------------------------------------------PHIPYRLLHLVWT--NARHLAGYEQQDAHEFLIAALDVLH-------------RHCKGYSDNKCLSINKFFT-------------GRNGMTSGNPHHCNCIIDQIFTGGLQSDVTCQECNNVSTTIDPIWDISLDL 331          
BLAST of NO13G00520 vs. NCBI_GenBank
Match: XP_011436620.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 isoform X1 [Crassostrea gigas] >EKC20928.1 Ubiquitin carboxyl-terminal hydrolase 22 [Crassostrea gigas])

HSP 1 Score: 102.1 bits (253), Expect = 1.200e-17
Identity = 113/468 (24.15%), Postives = 151/468 (32.26%), Query Frame = 0
Query:  179 CLQCGHKGCRQRSHIDGHFVSSNHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDLLRNVWAQARQDAITRDCSSKIGYRSRSRSSRNSSNSGSLLSLPPALRPSLFTWSHLSQPTTLSHAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCSKHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRNDHGXXXXXXXXXXXXXXXXXXXPCLACELQELFLLVFSREPTMPTPVLLCRPLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFIHDTYNKSLTAAVANATAVANTPPCEPIVPHRLMQAMWSLASVEHLAGYEQQDAHEFLIALLDALHTDLALXXXXXXXXXXXRSSSPTKPNPVGTFLSPSTVPALGDRKEGGREGEIEPSK-----VIHNAFRGTLRSDVVCSECQAVSTVFEPFLDLSLPL 642
            CL C + GC    HI  H  S NH L                  G IFC  CGD+VYD E + +    AQ + +   +    K               S + ++  P+         +  +    + +  GLRG  NLG+TCFMNCI+Q+L+H PVL+ FFL          KH    T+                       E Q+                        CL CE+  LF   +S   T                                                                                  P +P+RL+  +W+  +  HLAGYEQQDAHEFLIA LD LH                +  S  K   +  F +             GR G    +      +I   F G L+SDV C EC  VST  +P  D+SL L
Sbjct:   59 CLYCVYFGCYTTKHIHEHAFSKNHNLAADMTY------------GTIFCFECGDYVYDKELESI----AQIQNEKAAKSLGLK---------------SYNFIAWEPSEVEVEILRQNPKRRKVENKSTIGLRGLINLGNTCFMNCIVQSLIHTPVLRDFFL--------ADKHNCQMTSV----------------------EAQQ------------------------CLVCEMARLFQEFYSGNRT----------------------------------------------------------------------------------PHIPYRLLHLVWT--NARHLAGYEQQDAHEFLIAALDVLH-------------RHCKGYSDNKCLSINKFFT-------------GRNGMTSGNPHHCNCIIDQIFTGGLQSDVTCQECNNVSTTIDPIWDISLDL 331          
BLAST of NO13G00520 vs. NCBI_GenBank
Match: XP_016609886.1 (hypothetical protein SPPG_03637 [Spizellomyces punctatus DAOM BR117] >KND01847.1 hypothetical protein SPPG_03637 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 100.5 bits (249), Expect = 3.400e-17
Identity = 110/471 (23.35%), Postives = 153/471 (32.48%), Query Frame = 0
Query:  179 CLQCGHKGCRQRSHIDGHFVSSNHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDLLRNVWAQARQDAITRDCSSKIGYRSRSRSSRNSSNSGSLLSLPPALRPSLFTW--SHLSQPTTLS----HAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCSKHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRNDHGXXXXXXXXXXXXXXXXXXXPCLACELQELFLLVFSREPTMPTPVLLCRPLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFIHDTYNKSLTAAVANATAVANTPPCEPIVPHRLMQAMWSLASVEHLAGYEQQDAHEFLIALLDALHTDLALXXXXXXXXXXXRSSSPTKPNPVGTFLSPSTVPALGDRKEGGREGEIEPSKVIHNAFRGTLRSDVVCSECQAVSTVFEPFLDLSLPLKK 644
            CL C + GC +  HI  H   + H L +  L             G I+CS C ++VYD++ + + +   Q R D I                        S +  P A R   F W  S L   T LS        GLRG +NLG+TCFMN ILQA++HNPVL+ +FL   H+   C K                                 R+ H                     C+AC++  +F                                                                  H+ Y+                   +P  P   + AMW   S +H+AGY QQDAHEF I+L + +H + A                                             + E   VIH  F G L+SDV CS C  VST ++P +D+SL +K+
Sbjct:  149 CLGCVYIGCYRGGHIQEHMNQTGHTLAMDWLT------------GNIYCSQCKNYVYDLDLERVLHS-EQERMDRII-----------------------SRIKEPNAKRLRFFDWTPSTLEVQTILSGSKLQRCSGLRGCHNLGNTCFMNAILQAMIHNPVLRCYFLSDRHNRSLCPK---------------------------------RDQH---------------------CMACQMDLVF------------------------------------------------------------------HEFYSGE----------------TKPYGPAAFLNAMW--MSQKHMAGYSQQDAHEFFISLANEIHNNCAAQDME----------------------------------------DQECRCVIHQTFSGLLQSDVTCSACHNVSTAYDPIIDMSLEVKR 405          
BLAST of NO13G00520 vs. NCBI_GenBank
Match: XP_014158850.1 (hypothetical protein, variant [Sphaeroforma arctica JP610] >KNC84947.1 hypothetical protein, variant [Sphaeroforma arctica JP610])

HSP 1 Score: 99.8 bits (247), Expect = 5.800e-17
Identity = 101/464 (21.77%), Postives = 146/464 (31.47%), Query Frame = 0
Query:  179 CLQCGHKGCRQRSHIDGHFVSSNHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDLLRNVWAQARQDAITRDCSSKIGYRSRSRSSRNSSNSGSLLSLPPALRPSLFTWSHLSQPTTLSHAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCSKHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRNDHGXXXXXXXXXXXXXXXXXXXPCLACELQELFLLVFSREPTMPTPVLLCRPLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFIHDTYNKSLTAAVANATAVANTPPCEPIVPHRLMQAMWSLASVEHLAGYEQQDAHEFLIALLDALHTDLALXXXXXXXXXXXRSSSPTKPNPVGTFLSPSTVPALGDRKEGGREGEIEPSK-VIHNAFRGTLRSDVVCSECQAVSTVFEPFLDLSLPL 642
            CL C    CR++ H+  H+  + H L +                  ++C  CG++VYDV+ D  R +  + RQ A++             RS  ++    +     P          H  +P    ++  GLRG  NLG+TCFM+C+LQA +HNP L++FFL  SH    C +  +  +                                                    CL CEL  +F   F  E                                                                                   +P  PH+L+ ++W+ A   HLAGYEQQDAHEF I  L+ LH                                               +G  +  K +IH  F G ++SD+ C  C  VS   EPF D+SL L
Sbjct:   65 CLTCASYHCRRKEHLKQHYKETKHELAIDV------------ANNAVYCLVCGEYVYDVDID--RVIINEQRQAALS----------DLKRSDPSNFRRTAFSEWVPDGTEKAILNQHSKRPRLTEYSSLGLRGLNNLGNTCFMSCVLQAFVHNPPLRNFFLSGSHRKDRCMRRLSGDSKV--------------------------------------------------CLVCELNLIFTQFFKGE----------------------------------------------------------------------------------IKPYSPHQLLHSVWTHA--HHLAGYEQQDAHEFFITFLNGLHLHF--------------------------------------------QGTSKNCKCIIHRIFTGAIQSDLRCLSCGTVSATIEPFWDISLDL 326          
BLAST of NO13G00520 vs. NCBI_GenBank
Match: XP_014158849.1 (hypothetical protein SARC_02839 [Sphaeroforma arctica JP610] >KNC84948.1 hypothetical protein SARC_02839 [Sphaeroforma arctica JP610])

HSP 1 Score: 99.8 bits (247), Expect = 5.800e-17
Identity = 101/464 (21.77%), Postives = 146/464 (31.47%), Query Frame = 0
Query:  179 CLQCGHKGCRQRSHIDGHFVSSNHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDLLRNVWAQARQDAITRDCSSKIGYRSRSRSSRNSSNSGSLLSLPPALRPSLFTWSHLSQPTTLSHAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCSKHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRNDHGXXXXXXXXXXXXXXXXXXXPCLACELQELFLLVFSREPTMPTPVLLCRPLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFIHDTYNKSLTAAVANATAVANTPPCEPIVPHRLMQAMWSLASVEHLAGYEQQDAHEFLIALLDALHTDLALXXXXXXXXXXXRSSSPTKPNPVGTFLSPSTVPALGDRKEGGREGEIEPSK-VIHNAFRGTLRSDVVCSECQAVSTVFEPFLDLSLPL 642
            CL C    CR++ H+  H+  + H L +                  ++C  CG++VYDV+ D  R +  + RQ A++             RS  ++    +     P          H  +P    ++  GLRG  NLG+TCFM+C+LQA +HNP L++FFL  SH    C +  +  +                                                    CL CEL  +F   F  E                                                                                   +P  PH+L+ ++W+ A   HLAGYEQQDAHEF I  L+ LH                                               +G  +  K +IH  F G ++SD+ C  C  VS   EPF D+SL L
Sbjct:   65 CLTCASYHCRRKEHLKQHYKETKHELAIDV------------ANNAVYCLVCGEYVYDVDID--RVIINEQRQAALS----------DLKRSDPSNFRRTAFSEWVPDGTEKAILNQHSKRPRLTEYSSLGLRGLNNLGNTCFMSCVLQAFVHNPPLRNFFLSGSHRKDRCMRRLSGDSKV--------------------------------------------------CLVCELNLIFTQFFKGE----------------------------------------------------------------------------------IKPYSPHQLLHSVWTHA--HHLAGYEQQDAHEFFITFLNGLHLHF--------------------------------------------QGTSKNCKCIIHRIFTGAIQSDLRCLSCGTVSATIEPFWDISLDL 326          
BLAST of NO13G00520 vs. NCBI_GenBank
Match: XP_014233607.1 (ubiquitin carboxyl-terminal hydrolase 22 [Trichogramma pretiosum])

HSP 1 Score: 99.8 bits (247), Expect = 5.800e-17
Identity = 107/463 (23.11%), Postives = 144/463 (31.10%), Query Frame = 0
Query:  179 CLQCGHKGCRQRSHIDGHFVSSNHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDLLRNVWAQARQDAITRDCSSKIGYRSRSRSSRNSSNSGSLLSLPPALRPSLFTWSHLSQPTTLSHAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCSKHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRNDHGXXXXXXXXXXXXXXXXXXXPCLACELQELFLLVFSREPTMPTPVLLCRPLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFIHDTYNKSLTAAVANATAVANTPPCEPIVPHRLMQAMWSLASVEHLAGYEQQDAHEFLIALLDALHTDLALXXXXXXXXXXXRSSSPTKPNPVGTFLSPSTVPALGDRKEGGREGEIEPSKVIHNAFRGTLRSDVVCSECQAVSTVFEPFLDLSLPL 642
            CL C   GC    HI  H  + NH L +                G + C  CGD+VYD E   + N     +        +  I +    R    SS+  SLL+             H  +     ++  GLRG  NLGSTCFMNCI+QAL+H P+L+ FFL   H      K                                                          CL CE+  LF   +S + T                                                                                  P++ H+++  +W+ A   HLAGYEQQDAHEF IA LD LH    +                        +   +  P + D+ +           +I   F G L+SDVVC  C  VST  +PF D+SL L
Sbjct:  185 CLHCIFFGCHTNRHIHEHAKTKNHCLSIDLCY------------GNVLCFQCGDYVYDHELLKIANENLSLK--------AKFINFSEFYRPWDASSDEVSLLT------------QHPRRVRIEKNSTIGLRGLINLGSTCFMNCIMQALVHTPLLRDFFLADKHKCPDPKK----------------------------------------------------------CLVCEVASLFQQFYSGQKT----------------------------------------------------------------------------------PLILHKMLHMIWTHA--RHLAGYEQQDAHEFFIATLDVLHRHCEM------------------------YTPKTLAPVIIDQPD-------HCGCIIDQIFTGCLKSDVVCQSCHGVSTTVDPFWDISLDL 442          
The following BLAST results are available for this feature:
BLAST of NO13G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21721.12.400e-5550.18ubiquitin carboxyl-terminal hydrolase 22 [Nannochl... [more]
EWM22884.12.500e-5250.21ubiquitin carboxyl-terminal hydrolase 31 [Nannochl... [more]
CBJ28839.13.600e-1928.50Ubiquitin carboxyl-terminal hydrolase, putative [E... [more]
XP_004338330.15.300e-1823.55ubiquitin carboxylterminal hydrolase 22, putative ... [more]
XP_022315213.15.300e-1824.36ubiquitin carboxyl-terminal hydrolase 22-like [Cra... [more]
XP_011436620.11.200e-1724.15PREDICTED: ubiquitin carboxyl-terminal hydrolase 2... [more]
XP_016609886.13.400e-1723.35hypothetical protein SPPG_03637 [Spizellomyces pun... [more]
XP_014158850.15.800e-1721.77hypothetical protein, variant [Sphaeroforma arctic... [more]
XP_014158849.15.800e-1721.77hypothetical protein SARC_02839 [Sphaeroforma arct... [more]
XP_014233607.15.800e-1723.11ubiquitin carboxyl-terminal hydrolase 22 [Trichogr... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR057ngnoR057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001853NSK001853Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00520.1NO13G00520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672373gene_6964Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_102638g1gene8706Nannochloropsis gaditana (N. gaditana B-31)gene
Naga_100160g1gene7560Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00520.1NO13G00520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00520 ID=NO13G00520|Name=NO13G00520|organism=Nannochloropsis oceanica|type=gene|length=3936bp
GCTCCTCCAAGTTGCCTCCACACCCACCACGCAACAAGTCGATCCTTTCC
CTCCTTTATGCCTGCGCAAGGGCTCGGTCAGACACCACCGTGATCACGCG
CATATACATCATAACACAGAGACGATGTCGGGCACAGCCATTTCGTGCAC
ATGTCCGCACTTGGCGGCGGGCAAGTCTACCCACAAACTTCCAGCAGCCT
CCCCACTCGCCCTTGCTGTTGCTGCTGTTACGACCCCTGCGTCCGCGTCC
TCGTACGACACCACGCCTTCCTTCCTAGTGGAATCCCGGCCACAAAAACG
TCGGGCAGTGGACAAGATGGTCTCGGTGCGCGCTCAAGCCCTGGCCAATT
ATCGTCGCTTCCTGGAGGAGGAAGACAAGAGGGAGCAGGCGGCGGCTGCG
GGGTTGGGCGGCAGCAACGGCGGTGGAAGTTTACGTGGAGCCACGCCTGC
AACGGTGCGTTTCACGCGgtaagttaacgtgggagatgggattgccaacg
acttgctttttcgcgtgttggaggtggcgaatcaaaagctcatgacaatt
ttgtggcgtgtccgtccccttcatctcgtccttttctccccccccaaatg
ggtaatcgagcgacccgacttttcactcctttcatttttgagtttatgct
tgtctatgagtggatgcataagtggtagaatgaatggcctggattatgta
aatggggtaggttccttgtttacacaggcagatgggctgccaaggaaact
cacccattgcaaacgtgacgtgtcaaagccttataagagaatttcaagac
ccaacaggctaaataatgccacccccttcctccccatttttctatgcctc
tgaatggtaggccaaattttgcaaaaggtcctctttttaagaaggtatac
tgacttggcatctcttccacccaccatctaaaccacacagATCCGCCCTC
AGCACTGTGGCCGAAACGACGTTCGAATGCCCCAGCTGTCAAAACGAGCC
CTACCTCCCTCCCTCTCCGACCACTACCAACAGTAGCAGTAGCAGTAGCA
GCAGTAGCAGCAGTAGTAGCAGTAATTATGACAGATCCTTGGCTGACGCC
ATCTTAAAGGAGAAAGAGGATATTTTAATCTGCTTGCAGTGCGGACATAA
AGGATGTCGGCAACGGAGCCATATAGACGGGCATTTTGTCAGCAGCAACC
ACTTTTTGGGTGTGGTGGCTCTGGTGCCGGGGAATTGCAAGGGAGAGGGG
AAGGGAGAGGGAGGGGAGATATTTTGCTCATGGTGTGGGGATTTTGTATA
TGACGTGGAGTTCGATCTCTTGCGAAACGTGTGGGCCCAGGCCCGACAGG
ACGCCATCACCCGCGACTGTAGTAGTAAAATTGGCTATCGCAGCAGGAGC
AGGAGCAGTAGAAATAGCAGTAATAGCGGCAGCCTCCTCTCCCTCCCTCC
CGCTCTCCGTCCCTCCCTCTTCACCTGGTCCCACCTTTCCCAACCCACCA
CCCTCTCCCACGCCGTGCGGGGGCTCCGGGGATTCTATAACCTAGGGAGT
ACCTGTTTTATGAACTGCATCCTCCAAGCCCTCCTCCACAACCCCGTGCT
TCAACACTTCTTCCTCCGCCGATCTCACTCCCTCCGTTCCTGTTCAAAGC
ACCAAGCCACCACCACGGCAGCGATTGCCATCATGGTCAAGGGAAGAAAG
GAAACAGGAATGGGAGTGTGGGGCGGACAGCAGCATGGAGAGGGCCAGAG
GAATGATCATGGGAAAGAGGGCACCTCCTCCTCCTCCTCCTCCTCCTTCT
CGCCCTCCTTCGCGACCTCCCCCTGCTTGGCCTGCGAACTGCAAGAACTC
TTCCTCCTGGTCTTCAGCCGGGAGCCCACAATGCCCACGCCCGTCCTCCT
CTGTCGCCCCCTCCCCCTTTCCTCCTCCTCTTCCTCCTCTACAAAAAACA
AAATTTTGTCTACTTCCTCCTCCATCGACCAGTCCCAGCTCTCCGACGAC
CCCCCAAAGCAGCTGGAACAGCGACAACAGCAGCAGCAGCTACAGTTCAT
CCACGACACGTACAACAAATCCCTCACCGCCGCCGTTGCCAATGCCACAG
CTGTCGCCAACACCCCCCCCTGTGAGCCCATAGTGCCCCACCGCTTGATG
CAAGCGATGTGGTCCTTGGCCTCAGTCGAGCATCTGGCGGGCTATGAACA
GCAGGACGCGCACGAATTTCTGATTGCCCTCCTCGATGCCCTCCATACCG
ACCTCGCCCTTCCCCCCGCCCTCCCTCCTTCCATCCCAATCTCCAGGTCA
TCCTCTCCAACCAAACCAAATCCTGTCGGCACCTTCTTATCACCCTCGAC
GGTTCCAGCCCTCGGTGACAGGAAGGAGGGAGGGAGGGAGGGAGAGATTG
AGCCGTCAAAGGTGATCCACAATGCGTTTCGAGGGACTTTGAGGTCTGAC
GTTGTATGTTCGGAATGTCAGGCCGTTTCCACCGTCTTTGAGCCCTTTTT
AGATCTATCCCTCCCCTTGAAAAAAATGGCAGCAACCATACCACCACCAT
CGTCAGAAGCAGCACCACCAGCACAACCAGCAGCAGCACCAGCGGATGGA
GGAGAAGGAGATCAAGGAAAAGGACGAGAAGGAGAGTCGACAGCAGATGC
GGCGGTGATGCCATCCCCCAAGATGCCTTTGGTAAGAAAACCTAGCACGG
AGAGGAATAGGAATGCGGAGGGAGGAGACGGAGAGGGAGGAGGAGGAGGT
GGAGAAGGAGTAGGGGAGGGAGGGAAGCAGGGAGGGGAAGAAGGAAATGT
CACACCATCGCTGCTGGCGACCAAGGGCAAAGAGGACTGCAATCATGATG
ATGATGCCGCCATGGTGGTGGCAAAAGAGGCAGGGAAGGAAAGCAGGCAG
GGGGCACCAACCACAGTCACAATCTCTACCAGCACTGACTCTAGCATCAG
TGGTTCGCCGCCTCTTCCCTCTTCTCTTTCCTCCCCCAGCACTGCTCCTA
TCTCGTGTCCTCCGAAAACAGCAGCGTCCTCCATCTCCTCTCCGCCCCTC
CTCCCCTCCTCCGGCTCCATCAGCACCCTCGACTCTCCCCCTGACGCCCT
ATCAACCTCCCTCCCTTCCAAACCCACCACCTCCACCTCCTCCTCCTCTA
CCTCTAACTCCCGCGTCCGTCGCCAGCCCGATCGCCCTCGTCCCCCTCCT
GACGACCTCACCCTCTCTCATTGTCTTGAGACATACACCTCCCTCGAAAC
GCTCTCTTGTCCCTACCGCTGCGGCTCCTGTGGAGGTTCTTCCCCCTCCT
GCTCAAAGCAGCTCACGTTGCACCGATTGCCGAACGTGCTGGTGCTTCAT
TTAAAGCGATTTGATGCCTCTAGCGCTCGAAAGATCGAGAAATTCGTAGG
CTTCCCCCTCAAAGGCCTGGATATGGCCCCGTATGTCTACGAATGGCGAA
ACGCAGGTGGTGGGGGAGGAGGAGGAGGGGGGAAGGACGAGGGAAAGGAG
GATGGTGGCAAGGTGGAGAAGCCAGCGGGGTCAGAAAGAGAGGCAGCAGC
AGTGGGAGGAGTGGAAGGAGAAGGAGAAGGGGACAAGAAGGCGGCGATAA
TGTCACAAGTCGACACCACTACCAGAAATAGCAGCGGCAGCAACAACAAC
AGCAGCAGCAGCAGCAGCAACAAGAAAGCTGAGATTCCCTACGATCTGTT
TGCAGTCTGTGAGCATTTAGGGACCTCCCTGCAGCAAGGCCACTACAAAG
CTTACGTCCAGGAAGGAGCGGTGGAAGGGAAGGGGGGAGGGAGCGGGGGA
GGGTGGACTCCGGCGTGGTATGTCTGCAATGACACATGGGTGCTGCCAGT
GAGTGAAGAGGAAGTGCTGCGTGCGCAGGGTTACGTCCTCTTTTATGTTC
GAAGAGGGTGGAGTCCTTACATGTGCTAGGGAGGGA
back to top

protein sequence of NO13G00520.1

>NO13G00520.1-protein ID=NO13G00520.1-protein|Name=NO13G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1111bp
MSGTAISCTCPHLAAGKSTHKLPAASPLALAVAAVTTPASASSYDTTPSF
LVESRPQKRRAVDKMVSVRAQALANYRRFLEEEDKREQAAAAGLGGSNGG
GSLRGATPATVRFTRSALSTVAETTFECPSCQNEPYLPPSPTTTNSSSSS
SSSSSSSSSNYDRSLADAILKEKEDILICLQCGHKGCRQRSHIDGHFVSS
NHFLGVVALVPGNCKGEGKGEGGEIFCSWCGDFVYDVEFDLLRNVWAQAR
QDAITRDCSSKIGYRSRSRSSRNSSNSGSLLSLPPALRPSLFTWSHLSQP
TTLSHAVRGLRGFYNLGSTCFMNCILQALLHNPVLQHFFLRRSHSLRSCS
KHQATTTAAIAIMVKGRKETGMGVWGGQQHGEGQRNDHGKEGTSSSSSSS
FSPSFATSPCLACELQELFLLVFSREPTMPTPVLLCRPLPLSSSSSSSTK
NKILSTSSSIDQSQLSDDPPKQLEQRQQQQQLQFIHDTYNKSLTAAVANA
TAVANTPPCEPIVPHRLMQAMWSLASVEHLAGYEQQDAHEFLIALLDALH
TDLALPPALPPSIPISRSSSPTKPNPVGTFLSPSTVPALGDRKEGGREGE
IEPSKVIHNAFRGTLRSDVVCSECQAVSTVFEPFLDLSLPLKKMAATIPP
PSSEAAPPAQPAAAPADGGEGDQGKGREGESTADAAVMPSPKMPLVRKPS
TERNRNAEGGDGEGGGGGGEGVGEGGKQGGEEGNVTPSLLATKGKEDCNH
DDDAAMVVAKEAGKESRQGAPTTVTISTSTDSSISGSPPLPSSLSSPSTA
PISCPPKTAASSISSPPLLPSSGSISTLDSPPDALSTSLPSKPTTSTSSS
STSNSRVRRQPDRPRPPPDDLTLSHCLETYTSLETLSCPYRCGSCGGSSP
SCSKQLTLHRLPNVLVLHLKRFDASSARKIEKFVGFPLKGLDMAPYVYEW
RNAGGGGGGGGGKDEGKEDGGKVEKPAGSEREAAAVGGVEGEGEGDKKAA
IMSQVDTTTRNSSGSNNNSSSSSSNKKAEIPYDLFAVCEHLGTSLQQGHY
KAYVQEGAVEGKGGGSGGGWTPAWYVCNDTWVLPVSEEEVLRAQGYVLFY
VRRGWSPYMC*
back to top
Synonyms
Publications