NO13G00470, NO13G00470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00470 vs. NCBI_GenBank
Match: EWM22886.1 (uncharacterized protein Naga_100160g7 [Nannochloropsis gaditana]) HSP 1 Score: 827.8 bits (2137), Expect = 4.600e-236 Identity = 584/1316 (44.38%), Postives = 718/1316 (54.56%), Query Frame = 0 Query: 1 MEALEESLGGELTVERVRCEMKGLSESIQAKQTEIQLIVGSRYHELIESADAVLGMYKSCKHLQRTLTTEVPPALSNLLQEKRPDLHLRPWQEAAAAAVIAQEAQHQQIGAFPLTKEDVHFMLQAPTRLWEAMDAGQYLTAATLWVDAKGIADKTDTQASXXXXXXXXXXXXXXXXXXXXXXAPLQHSEWTSTQRQVQLVVEQQWACLRDLKESITAGAHALLRDQDVENTQQHASALVALSRLVPSVSTGGNT--LLNLFLERRDQWLEGLLKE---------EVATRQVEVKLNRAVQALRRTVLDTNLIFVGDGDGEREGEKENGGALVDLRLERPVVAETVTAWMGRWMVQIHAQARRWLKMLKSSTELTSVRQALWRETHLFATPASWSDTSATIEGEEKEEGGGHVQHQPHRQLHQHQLQRGFYPPTMQAWRKVCHTVLFLDKLRYALVRAGLSLTFLPCP----PAGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLWGVLFSDSFALLVNDLLQQSMGTIYAAFKQKFDTILSVLDRSPDFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAIEMAWAADHLCTFLLQQLRQAQGHAQELIQQGDLTAASALGASLQAQALRLMAHLSSFLRTWVQDY-------------EESISSSTSDKEKAAASSFLASLSSPK-IDALLIIARFTSLVLAKAPSTILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKTIDNIQLESAFTIADARGQGELTPAELQECLDTLGLTQELSSPXXXXXXXXXXXXXXXLSATFAEVALLCNAELEDDAHPHPAAFYLERAYRDIFTLALAVWARRVVAPLEKGLKEEGVRGLWLVGGKERG-------KDKWRAHRPGWEEKVSVQEDESGRTFEDRMWVPTTVSPHVSVFLFSLAAELRRVTQSSDGLRGWLGVEGXXXXXXXXXXXXXXXXXXXQCQ-EMQAGAQKGSKAALPSSSSSFLGTSSTTLLESFRLALVREARRSVEAAXXXXXXXXXXXXXXXXXXRRGHLEVEKMGEDAVLQAVLDLHFLRLWLGHESGVAPSSVSXXXXXXXXXXXXGAGWLGGSLQALVATVDPINYEAVEPFVREAVQVYSQGCALIISHLCCPQGVSSNSGWK-----GRGSISLSVSRKTLSGGEQRDDGGSGSEYSARALPLLPPVPRFTLLPVVVEASTPTSARLSPPRA------GKEGGGMSSFLFSDIMDVGGVG-GTSGGGRVRVSAXXXXXXXXXXXXXXXXXSSLFGGGRQ 1268 MEA+EESLGGELTVERVR EMK LSE IQAKQTEIQLIVGSRYHELIESADAVL M KSC +LQ LT EVPP +++LLQEKR HLRPW+E AAA Q GAFPLT+EDV +ML APTRLWEAMDAG+YL AA+ W AK IADK QA+ + +WT+TQRQVQLV+ QWACL+DLK SI +GAHALL DQ+V + +QH ALV+L+RL ++++G L+ LFLERR QWLE L E E + V KL RAVQAL+RTVLD + +F+ GE G E AL DLR +VAE TAW+G W+V++H+QA R LK LKSS++L VR+ALW+ETH A++ G E G + Q G P ++ WR+ C V+ + LR AL +A L ++ P E LD+W LFS SFA ++ DL Q SM ++Y + KF+ ILSV+ SP S FTAIEMAWAADHL L++ LRQ HA+EL+Q GD AA+ALG+SL AQ L L++ LSSF R+W+Q++ ++SI +SS L S P +DA+LI+ARF +L AP T+L V++ID +QLESAFTIAD+RG+GELTPAEL ECLDTLGL+Q SSP XXXXX SATFAEV LLC A L++D PA YL+ A+ F L L WAR V L + + EG +GL L G + R KD R+ RPGWEE+V VQEDE GR EDR+W+PTT SP +SVF FSLAAEL RV Q DG++G G EG C+ E QA +G A+ S SSS TLLESFR ALV+EARR +E +G LE++ M ED VLQAV D++FLR W HE G + S G WLG +L+ L +DP+N+EA +P V+E V YSQGCALI+SHLC G + GR + SLS+SR++ S E + + + YSA+ LPL+P VPRFTLLPV+VEASTPT+A LSP R GKE SSF FSDIMDVGGVG XXXXXXXXX SSLFGGGR+ Sbjct: 1 MEAIEESLGGELTVERVRREMKTLSEGIQAKQTEIQLIVGSRYHELIESADAVLDMCKSCNNLQHILTMEVPPVVADLLQEKRLHSHLRPWREVAAAXXXXXXXXXXQPGAFPLTREDVVYMLHAPTRLWEAMDAGRYLAAASTWTTAKDIADKIAEQAASAASTNTSNPALSSGDDSIRDDEEGRMRKWTATQRQVQLVIGNQWACLKDLKSSIISGAHALLADQNVLDVRQHGLALVSLARLDDAIASGARETGLVTLFLERRGQWLEALSGEGGGVHGEDKETLSGHVLSKLTRAVQALKRTVLDAHTLFI---VGEESGASEEDQALRDLRRAGRIVAEATTAWLGGWLVKVHSQAHRSLKTLKSSSDLARVRKALWQETH------------ASLVGPGLGEDG-------------QREQSGRSPKGVRLWREACRAVIHPESLRQALSKANLPCCWVSTPSLDGATEEKGRSEPGERASSAHAFAHRSRASVLGHVAVVGANDGLDVWASLFSTSFAAMLEDLFQASMTSLYQTWVGKFERILSVVSSSPSSS---------------------SSLGQDRRFTAIEMAWAADHLYCCLVKGLRQIHRHARELVQDGDEAAAAALGSSLHAQTLSLLSRLSSFSRSWLQEWDGRCPLSSPSTLNQQSIHQDALSPASLPSSSSLTPPSCPSDMDAVLILARFAWRLLTTAPRTLL----SPFSPVEPPIPDPLDASEDSVCNSGSRMNVKESRRRGSGTSGKVRSIDMVQLESAFTIADSRGEGELTPAELHECLDTLGLSQASSSP---------PXXXXXXSATFAEVVLLCYAALDEDQPADPATAYLQDAFGRTFDLGLRAWARHTVRSLGERVLGEGGQGLGLEGAERRNGGMESRDKDSVRSRRPGWEERVLVQEDEEGRPLEDRIWIPTTPSPPLSVFCFSLAAELGRVAQGQDGIKGKSG-EG--------ELGGREEDNSEACRLEGQAQHGQGDGASGHSLSSSSFNPFLVTLLESFRRALVQEARRKLEIMYTIAGNAGG----------KGGLEMKNMVEDDVLQAVFDVNFLRYWFEHECGEISAVSSPSSPTFLNVGAEGTNWLGRTLRTLNDAMDPVNFEAFDPLVKEGVLSYSQGCALIMSHLCSRPGAHARRAMDIGSDIGR-TTSLSMSRRS-SIEEMLKNDKNVAGYSAQVLPLVPAVPRFTLLPVMVEASTPTAALLSPARVNGKVEPGKE-NRRSSFTFSDIMDVGGVGVXXXXXXXXXXXXXXXXXXXXXGSAASNVLSSLFGGGRR 1232
BLAST of NO13G00470 vs. NCBI_GenBank
Match: CBJ25581.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 112.8 bits (281), Expect = 7.600e-21 Identity = 264/1239 (21.31%), Postives = 418/1239 (33.74%), Query Frame = 0 Query: 12 LTVERVRCEMKGLSESIQAKQTEIQLIVGSRYHELIESADAVLGMYKSCKHLQRTLTTEVPPALSNLLQEKRPDLHLRPWQEAAAAAVIAQEAQHQQIGAFPLTKEDVHFMLQAPTRLWEAMDAGQYLTAATLWVDAKGIADKTDTQASXXXXXXXXXXXXXXXXXXXXXXAPLQHSEWTSTQRQVQLVVEQQWACL---------RDLKESITAGAHALLRDQDVENTQQHASALVALSRLVPSVSTGG-NTLLNLFLERRDQWLEGLL---KEEVATRQVEVKLNRAVQALRRTVLDTNLIFVGDGDGE---REGEKENGGALVDLRLERPVVAETVTAWMGRWMVQIHAQARRWLKMLKSSTELTSVRQALWRETH---LFATPASWSDTSATIEGEEKEEGGGHVQHQPHRQLHQHQLQRGFYPPTMQAWRKVCHTVLFLDKLRYALVRAGLSLTFLPCPPAGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLWGVLFSDSFALLVNDLLQQSMGTIYAAFKQKFDTILSVLDRSPDFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAIEMAWAADHLCTFLLQQLRQAQGHAQELIQQGDLTAASALGASLQAQALRLMAHLSSFLRTWVQDYEESISSSTSDKEK----AAASSFLASLSSPKIDALLIIARFTSLVLAKAPSTILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKTIDNIQLESAFTIADARGQGELTPAELQECLDTLGLTQELSSPXXXXXXXXXXXXXXXLSATFAEVALLCNAELEDDAHPHPAAFYLERAYRDIFTLALAVWARRVVAPLEKGLKEEGVRGLWLVGGKERGKDKWRAHRPGWEEKVSVQEDESGRTFEDRMWVPTTVSPHVSVFLFSLAAELRRVTQSSD--------GLRGWLGVEGXXXXXXXXXXXXXXXXXXXQCQEMQAGAQKGSKAALPSSSSSFLGTSSTTLLESFRLALVREARRSVEAAXXXXXXXXXXXXXXXXXXRRGHLEVEKMGEDAVLQAVLDLHFLRLWLGHESGVAPSSVSXXXXXXXXXXXXGAGWLGGSLQALVATVDPINYEAVEPFVREAVQVYSQGCALIISHLCCPQGVSSNSGWKGRGSISLSVSRKTLSGGEQRDDGGSGSEYSARALPLLPPVPRFTLLPV---VVEASTPTSARLSPPRAGKEGGGMSS 1217 ++VE+ + LS + KQTE+QL+VGSRYHELIESAD+++ M ++ + L + P A SN+LQ+ L P + + ++A + + E V ML AP +W A+D+ + L AA L + + S WT V+ A + + ++AG L R NTQ+ A AL A+ +L LL L L + +L +E + +E L+ AV ++RT++D + IF +G + + + LRL + T W+ +I R L+ + L +R +LW+ TH +ATPA+ + +I + ++ + + AW D RA P LDLW +LFS FA L LL+ S+ +I + + D+IL + R+ A ++ AAD + + L ++R G A L ++GD TAA AL S ++ + A L++ LR +Q+ I S+ + + L + S DA L+I R ++ ++ + I+ QLE+AF IAD G G + E E L + + S T E L LE+ P +L + + +LAVW+ + L E + L D WR WE+K + + G ++ + P VSP + ++ +AAEL R+ ++D GW + Q+ Q + +A S+ G + S LA VR + A H + E A LQ +LD FL+ W+ +PS S + L VDPIN + P ++ A C +S L Q + S+S S SVS DG GS S+ +PL P V RF +LP+ VV P + S G + G +S Sbjct: 11 MSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGAEV-LGLLRKFPQACSNVLQQVPSS--LSPGTSDLSGTDVREDAAARHV------MEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCR--------------------------------------SSWTDLSSTFSTGVDSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSC---NTQETAGALTAILQLQALEDANPLRCLLELLLXXXXXXVVAMLTRATKEENSSDIEQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPSCRSQASLRLSAHDAKDMCTTWLSVLTPKIRVFGERLLRATGDTNSLARIRGSLWKVTHGDGAWATPAAGTRAGGSIRAVQ----------------GLMWMEATSFAVDVSAW----------DGGTNGSTRAWGQDVSSP-----------------------------------------QLDLWSLLFSQIFADLAEALLKDSLASIRRDVECRLDSILLAITRN----------ETGQGVQEARSFSGSHRQEQPHALMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAAGLANHLRIALQEIHACIKSAAEQERRCVPYGGRIGDLENAVSSFADAGLLIGRVAWMLNGRSGGPLQYALTPPACFAQRRRG----------------------------------RIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFGASAA---------LAVDPSRYASFTLNEFFLFATRLLEEQ-RPRQ---HLTSCLDTLLSESLAVWSEWALEKSAALLTEGCNAMVILCANPGMTNDLWRQAHGIWEDKTIELDRDDGDGIQETVHFPIMVSPAILCYIEGVAAELSRILSTADLTERAVTESCSGW------------------------KTQDAQPSGDE-ERALGWSAPGKATGQGAARYARS--LAAVRASSDLSHA--------------LVGLCEGAHSAAAQACEAAQLQLLLDALFLQKWVSDSPKSSPSMESV-------------------VTTLCDLVDPINLQIYMPHLQTAASACWAACHTPLS-LIFEQAIPSSS-----APSSASVS----------PDGALGS--SSSFIPLAPKVRRFEILPLSLEVVRLQHPNGSSRSRNSVGIKSGAPAS 997 The following BLAST results are available for this feature:
BLAST of NO13G00470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00470 ID=NO13G00470|Name=NO13G00470|organism=Nannochloropsis oceanica|type=gene|length=3866bpback to top protein sequence of NO13G00470.1 >NO13G00470.1-protein ID=NO13G00470.1-protein|Name=NO13G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1268bpback to top Synonyms
Publications
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