jgi.p|Nanoce1779_2|117773, gene_6970 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|117773
Unique Namegene_6970
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:564312..568472 -

Link to JBrowse

Properties
Property NameValue
TranscriptId117859
ProteinId117773
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:564312..568472 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G00470NO13G00470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|117773mRNA_6970-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|117773mRNA_6970Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|117773

>mRNA_6970-protein ID=mRNA_6970-protein|Name=jgi.p|Nanoce1779_2|117773|organism=Nannochloropsis oceanica|type=polypeptide|length=1176bp
MEALEESLGGELTVERVRCEMKGLSESIQAKQTEIQLIVGSRYHELIESA
DAVLGMYKSCKHLQRTLTTEVPPALSNLLQEKRPDLHLRPWQEAAAAAVI
AQEAQHQQIGAFPLTKEDVHFMLQAPTRLWEAMDAGQYLTAATLWVDAKG
IADKTDTQASPAATAAAAAAATGHAADNSANSAPLQHSEWTSTQRQVQLV
VEQQWACLRDLKESITAGAHALLRDQDVENTQQHASALVALSRLVPSVST
GGNTLLNLFLERRDQWLEGLLKEEVATRQVEVKLNRAVQALRRTVLDTNL
IFVGDGDGEREGEKENGGALVDLRLERPVVAETVTAWMGRWMVQIHAQAR
RWLKMLKSSTELTSVRQALWRETHLFATPASWSDTSATIEGEEKEEGGGH
VQHQPHRQLHQHQLQRGFYPPTMQAWRKVCHTVLFLDKLRYALVRAGLSL
TFLPCPPAGESGGKGAAQQQQQQQQQQQQQQRFTAIEMAWAADHLCTFLL
QQLRQAQGHAQELIQQGDLTAASALGASLQAQALRLMAHLSSFLRTWVQD
YEESISSSTSDKEKAAASSFLASLSSPKIDALLIIARFTSLVLAKAPSTI
LRLASSPSSSSSSAAATTAEEAAAQVNSLSSSTSSSKQGRKAGGGATAVK
TIDNIQLESAFTIADARGQGELTPAELQECLDTLGLTQELSSPPPSSSSL
SSSPSSMSLSATFAEVALLCNAELEDDAHPHPAAFYLERAYRDIFTLALA
VWARRVVAPLEKGLKEEGVRGLWLVGGKERGKDKWRAHRPGWEEKVSVQE
DESGRTFEDRMWVPTTVSPHVSVFLFSLAAELRRVTQSSDGLRGWLGVEG
GEEGEEGGGVGSGRRRGQSQCQEMQAGAQKGSKAALPSSSSSFLGTSSTT
LLESFRLALVREARRSVEAAYALSSSSSSSSSSTKQTERRGHLEVEKMGE
DAVLQAVLDLHFLRLWLGHESGVAPSSVSSYSSSSSSSTEEGAGWLGGSL
QALVATVDPINYEAVEPFVREAVQVYSQGCALIISHLCCPQGVSSNSGWK
GRGSISLSVSRKTLSGGEQRDDGGSGSEYSARALPLLPPVPRFTLLPVVV
EASTPTSARLSPPRAGKEGGGMSSFLFSDIMDVGGVGGTSGGGRVRVSAG
ASAAASVVGSAASNVLSSLFGGGRQ*
back to top
Synonyms
Publications