NO13G00380, NO13G00380 (gene) Nannochloropsis oceanica

Overview
NameNO13G00380
Unique NameNO13G00380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3074
Alignment locationchr13:124094..127167 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:124094..127167 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036278Sialidase_sf
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO13G00380 vs. NCBI_GenBank
Match: EWM26413.1 (hypothetical protein Naga_101468g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 325.5 bits (833), Expect = 3.900e-85
Identity = 165/305 (54.10%), Postives = 211/305 (69.18%), Query Frame = 0
Query:    1 MYLPLVLPLLVVLGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARPFRMLSPAQIIQNPDGTTAIYWTDFDFKKS--SKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGECDLIVEPDFNAYKVVLAGTRA 304
            M +  V   LVVLG A+APTA+AQECP L +  KA+P  KRG+LAG+  A++TV +RSKE   D+NFK+ LP GLS+V+  +RP   + P ++++NPDG+TA++W  FDF K+  +KRVF+A    D CAPE L VT LAYLVNATDL+ YCA PL  P VL VRY   KKV+        TCAPTPAP+VNPA PF +FG+GQRCL+A +LAPFD R   L ++  G +   +I  +HR L    I  P++CF YCS+NG E  PFFFNWNT T+QCFCCG  C LIV+P F+AY+V +  T A
Sbjct:   36 MRVLFVSACLVVLGIAYAPTAVAQECPTLTLTGKARPGFKRGVLAGKGHARVTVTLRSKEVVDDLNFKLLLPTGLSLVRTSSRPKARIHP-EVVENPDGSTAVFWLGFDFAKAKGNKRVFKAKAKVDACAPETLTVTGLAYLVNATDLTTYCATPLASPAVLNVRYSKAKKVA--------TCAPTPAPTVNPAQPFVLFGDGQRCLEASRLAPFDDR--RLLSSSNGREYAHSIHREHRHLQ--SIATPSDCFTYCSLNGGESVPFFFNWNTVTSQCFCCGNVCTLIVDPAFSAYEVTMDATSA 327          
BLAST of NO13G00380 vs. NCBI_GenBank
Match: EWM25605.1 (hypothetical protein Naga_100543g1 [Nannochloropsis gaditana])

HSP 1 Score: 280.0 bits (715), Expect = 1.900e-71
Identity = 146/307 (47.56%), Postives = 201/307 (65.47%), Query Frame = 0
Query:    1 MYLPLVLPLLVVLGGAWAPTA-IAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARPFRMLSPAQIIQNPDGTTAIYWTDFDFKKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKK--VSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGECDLIVEPDFNAYKVVLAGTRA 304
            M + + L  L++ G  WA T+ +AQ C  LI+  K  P+ KR ILAG+ +AKI +K+RSK+  +D+N K+ LPAGLS VK  A P R  SP  I+ N DGTTAIYWT F+   + K +F+  V  ++CA E L V  LAY++NATD +  C+  L +P+ LR+RYP ++K  + +      +TCAPTPAP+ NP+ PF  FG GQRCL+A +LAPF DRRL    +  +  +     D  HR L  V I  P +C+ YCS+NG E +PFFFNWNTAT QCFCCGG+C LI++P+F+ ++V++  T A
Sbjct:    1 MRVTVALASLILFGAGWALTSVVAQGCSGLILTGKIHPSSKRQILAGQGQAKIAIKVRSKQTVEDLNVKVALPAGLS-VKRTASPRRAGSPV-IVSNIDGTTAIYWTKFNL--THKHLFRVKVGVENCASEALAVRVLAYVLNATDSATECSQSLANPLNLRIRYPASQKYGLGKKKQKMPMTCAPTPAPTTNPSAPFVPFGVGQRCLEASRLAPFEDRRLKGQEDTIKISEDSKVDDKIHRPLGLVAIQTPFDCYTYCSLNGGESAPFFFNWNTATTQCFCCGGQCTLILDPEFDTFQVLIPATAA 303          
BLAST of NO13G00380 vs. NCBI_GenBank
Match: EWM20109.1 (hypothetical protein Naga_101756g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 270.8 bits (691), Expect = 1.100e-68
Identity = 150/306 (49.02%), Postives = 195/306 (63.73%), Query Frame = 0
Query:    1 MYLPLVLPLLVVLGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARPF--RMLSPAQIIQNPDGTTAIYWTDFDFKKS--SKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 302
            M L L    L +LG A   TA AQ+CP +++  K +PN KRG+LAG+ KA ITV++R+K+   D+ FKM+LP+GLSV++  ARP   R+ SP +I+QN DG+TAI+W   DF KS   KRVF+A V+ D+CAPEML +T LAYL NAT  + +C  PL  P VLRVRY  +K        RSVTCAPTPAP+VNP  PF +FGEGQR  Q G LAPF  R  ++H         S     +RQL    I     C++YCS+N N  SPFFFNWN  T++CFCC   C   I +P ++ Y+V++  T
Sbjct:    1 MRLSLSSLYLSLLGLALILTATAQQCPTVLLSGKTRPNSKRGVLAGKGKATITVRLRTKDPVDDLAFKMDLPSGLSVLRTVARPASKRIASP-EIVQNLDGSTAIFWLGMDFTKSKGGKRVFRAKVVVDECAPEMLVITGLAYLANAT--ATFCETPLASPEVLRVRYGKSK--------RSVTCAPTPAPTVNPTQPFVLFGEGQRFSQGGVLAPFSERRLSMHPGP------SKTHVANRQLQ--AIGTTEACYEYCSLNANVSSPFFFNWNRVTSECFCCLSTCTPFIFDPAYDVYEVIIPAT 287          
BLAST of NO13G00380 vs. NCBI_GenBank
Match: EWM20143.1 (hypothetical protein Naga_101529g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 270.4 bits (690), Expect = 1.500e-68
Identity = 149/300 (49.67%), Postives = 186/300 (62.00%), Query Frame = 0
Query:    1 MYLPLVLPLLVVLGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARPFRMLSPA-QIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFD-RRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYK 296
            M +  +   L +L     P   AQECP +++ AK +P+ KRG+LAGR KA ITVK+RSK++  D+ FK+ LP GLSV++   RP    S A QI+QN DG T IYW   DF   K  KRVF+A V  + CAPE L VT LAY  NAT  S +C  PL +P +L VRY   KK        S TCAPTPAP+VNP  PF +FGEGQR  Q G LAPF+ RRLS   ++DE   +  T    +RQLPPV I  P +CF+YCS+N N  SPF F+WN    QCFCC   C  LI +PD++ Y+
Sbjct:    1 MRVSSIASCLALLLVTLVPPVAAQECPTILLAAKTRPDSKRGVLAGRSKATITVKLRSKDSVDDLAFKLALPTGLSVIRTATRPASKRSVAPQIVQNADGMTNIYWLGVDFTRPKGGKRVFRAKVAVEKCAPETLVVTGLAYFANAT--STFCETPLTNPEILHVRYGKFKK--------SATCAPTPAPTVNPTQPFVLFGEGQRFSQGGVLAPFNTRRLSMHSDSDEVRDASQTRRAVNRQLPPV-IATPEDCFEYCSLNANVSSPFLFSWNRVATQCFCCLSVCTPLIFDPDYDVYE 289          
BLAST of NO13G00380 vs. NCBI_GenBank
Match: EWM23483.1 (putative lipase, partial [Nannochloropsis gaditana])

HSP 1 Score: 263.8 bits (673), Expect = 1.400e-66
Identity = 142/300 (47.33%), Postives = 188/300 (62.67%), Query Frame = 0
Query:    9 LLVVLGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDFKKS--SKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADE--GLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 302
            L+ +LG       ++QECPRL + AK +PN KRGILAG+ +AKITV ++SK+   ++ F++ LP GLSV +   RP  +  +P QI+++ DGTTAIYW    F KS   KR F+  V AD+CAP+ L V A AYLVNATD S  C  PL  P +++VRY          L  + TCAPTPAP++NP  PF + GEGQR  Q G+LAPF DRRLSA   + +  G+ S      +H Q     I+ P  C++YCS+N  E  PF F+WNT T+QCFCC G C  L+ +PDFN Y+ +L  T
Sbjct:    9 LVALLGFTSILATVSQECPRLFLKAKVRPNAKRGILAGKGQAKITVTLKSKDPVDNLEFQLNLPNGLSVERTAMRPSSKPYAPPQIVEDTDGTTAIYWLGVAFTKSKGGKRRFRVKVKADECAPDTLAVDAFAYLVNATDAS--CITPLASPAIVKVRY--------SKLKNAATCAPTPAPTINPTQPFVLLGEGQRFSQGGRLAPFQDRRLSAHPGSSKHGGIMSFGRAGDRHLQ----SIDTPEACYEYCSLNSGEVVPFLFSWNTVTSQCFCCVGVCTPLVFDPDFNVYEALLPKT 294          
BLAST of NO13G00380 vs. NCBI_GenBank
Match: EWM26026.1 (hypothetical protein Naga_100629g4 [Nannochloropsis gaditana])

HSP 1 Score: 259.6 bits (662), Expect = 2.600e-65
Identity = 141/283 (49.82%), Postives = 178/283 (62.90%), Query Frame = 0
Query:    9 LLVVLGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGECDLIVE 289
            L+ +L  A +PTA++QECPRL + A+ +P  KRGILAG+ K  ITVK+ SK+   DV F++ LP GLSV +   RP  +  +P QI+QNPDGTTAIYW   DF   K  KR F+  V AD+CAPE L + A AYLVNAT   A   +   +  +L VRYP +K         + TCAPTPAPSVNPA PF +F EGQRC +AG+LAPF+ R  +L +   G        G  R L    I++P  C+ YCS+N  E +PFFFNWNTAT+QCFCCG     I E
Sbjct:    9 LVALLAFAGSPTAVSQECPRLNLKAQVRPTAKRGILAGKGKGMITVKLNSKDPVDDVEFQLNLPNGLSVERAVMRPSTKPFTPPQIVQNPDGTTAIYWLGIDFTKPKGGKRRFRVKVKADECAPETLTIDAFAYLVNAT---AASCITSTNSAILSVRYPKHK--------NAATCAPTPAPSVNPAQPFVLFREGQRCSEAGRLAPFEDRRLSLSSGHGGNGPAQRHSGD-RDLQ--SIDSPEACYAYCSLNAGEETPFFFNWNTATSQCFCCGSVSPTIRE 277          
BLAST of NO13G00380 vs. NCBI_GenBank
Match: XP_005852708.1 (hypothetical protein NGA_0705900, partial [Nannochloropsis gaditana CCMP526] >EKU23125.1 hypothetical protein NGA_0705900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 258.8 bits (660), Expect = 4.400e-65
Identity = 138/298 (46.31%), Postives = 187/298 (62.75%), Query Frame = 0
Query:    9 LLVVLGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDFKKS--SKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 302
            L+ +LG     T ++QECPRL + AK +PN KRGILAG+ +AKITV ++SK+   ++ F++ LP GLSV +   RP  +  +P QI+++ DGTT+IYW    F KS   KR ++  + AD+CAPE L V A AYLVNATD S  C  PL  P +++VRY          L  + TCAPTPAP++NP  PF + G+GQR  Q G+LAPF DRRLSA   + +    ++     HR L    I+ P  C++YCS+N  E  PF F+WNT T+QCFCC G C  L+ +PD N Y+ +L  T
Sbjct:  140 LVALLGFTSILTTVSQECPRLFLKAKVRPNAKRGILAGKGQAKITVTLKSKDPVDNLEFQLNLPNGLSVERTAMRPSSKPYTPPQIVEDTDGTTSIYWLGVAFTKSKGGKRRYRVNMKADECAPETLAVDAFAYLVNATDAS--CITPLASPAIVKVRY--------SKLKNAATCAPTPAPTINPTQPFVLLGKGQRFSQGGRLAPFQDRRLSAYPASSKHGSIMALGQAGHRHLQ--SIDTPQACYEYCSLNSGEVVPFLFSWNTVTSQCFCCVGVCTPLVFDPDSNVYEALLPKT 425          
BLAST of NO13G00380 vs. NCBI_GenBank
Match: EWM26431.1 (lipase [Nannochloropsis gaditana])

HSP 1 Score: 258.8 bits (660), Expect = 4.400e-65
Identity = 145/310 (46.77%), Postives = 188/310 (60.65%), Query Frame = 0
Query:    3 LPLVLPLLVV----LGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDFKKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALH---NADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGTRA 304
            + LVL +LV+    L  A      +Q+CPRL + AKA PN K G+LAG+ KA+I+V +R+K+   D+NFKM LP+G+SV +   RP  +   P +++ N DGTTA+YW D DF + SKR F+  V  D CAPE L V A AYL NAT  S +C  PL  P +LR RYP  K           TCAPT APSVNP   F +F  GQR  Q GQLAPFD R  +LH   N       LS  D  HRQL P+E  +  +C++YCS+ G + +PFFF+WN AT+QCFCC   C   I +P F+  KV+++ T A
Sbjct:   11 IQLVLGILVLCLSQLSTASIQLTASQQCPRLAIRAKAHPNTKHGVLAGKGKAQISVILRTKDPISDLNFKMTLPSGMSVRRTATRPSIKPHMPPEVVGNIDGTTALYWLDIDFSRRSKRRFRVKVNIDLCAPEHLVVDAFAYLNNAT--STWCVTPLASPALLRARYPKEK---------PATCAPTLAPSVNPTQSFVVFAPGQRFSQGGQLAPFDNRRLSLHPEMNLAINQDVLSFGDTYHRQLQPIETKD--DCYEYCSLVGGKIAPFFFSWNNATSQCFCCATVCTPFIYDPAFDVQKVLVSATSA 307          
BLAST of NO13G00380 vs. NCBI_GenBank
Match: EWM21515.1 (hypothetical protein Naga_100317g3 [Nannochloropsis gaditana])

HSP 1 Score: 255.4 bits (651), Expect = 4.900e-64
Identity = 133/296 (44.93%), Postives = 187/296 (63.18%), Query Frame = 0
Query:    6 VLPLLVVLGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARPFRMLSPAQIIQNPDGTTAIYWTDFDF-KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGECDLIVEPDFNAYKVVLA 300
            ++ L V+LG +  P+  A+EC  + + AK +P  KRGILAG   AK+TV +R+K+A + +N K+ LP+ LSVV+   RP         ++N +  TAIYW+D DF +++ +++F   V ADDCAP+ L++ ALAYL NAT  + +C VPL  P VL +RY  +K        R+ TC PTPAPS+N A PF  FG GQRC +A +LAPF DRRL           +   I  + R L    I+ P +C++YCS+NG  P+PFFFNWNT  ++C CC GEC LI +P F+A+KV++A
Sbjct:    6 IVSLFVLLGLSCIPSLAAEECANIRLTAKVRPTAKRGILAGNGHAKLTVILRNKDAVEGLNIKISLPSSLSVVRTTTRPRTPYVLPYAVENLE-ETAIYWSDIDFARRNRRKLFHVKVQADDCAPKQLEINALAYLANAT--TTHCTVPLSKPEVLNIRYAESK--------RTTTCVPTPAPSINLAEPFVPFGLGQRCAEASRLAPFGDRRLQEHLERGRLQDNTRVISARARHLQ--GIDTPQQCYEYCSLNGGAPAPFFFNWNTVASECLCCAGECTLIRDPAFDAFKVIVA 288          
BLAST of NO13G00380 vs. NCBI_GenBank
Match: EWM20839.1 (secreted protein [Nannochloropsis gaditana])

HSP 1 Score: 252.7 bits (644), Expect = 3.200e-63
Identity = 140/297 (47.14%), Postives = 186/297 (62.63%), Query Frame = 0
Query:    9 LLVVLGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKAKITVKIRSKEAAQDVNFKMELPAGLSVVKLKARPFRMLS-PAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALH--NADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVL 299
            L+V LG A   T ++QECPRL + AKA+PN KRGILAG+ +A+ITV + SK+   ++ F+++LP GLSV +   RP    S P QI+++ DGT+ IYW    F  +K  K  F+  V AD+CAPE L V A AYLVNAT  +A C  PLV+  +++VRY          L ++ TCAPTPAPS+NP  PF +FG GQR  Q G+LAPF +RRLSA    N    L +LS    +H Q     I+ P  C++YCS+N  E +PFFF+WN  T QCFCC   C   + +PD N Y+ +L
Sbjct:   35 LVVFLGLAGVLTTVSQECPRLTLKAKARPNAKRGILAGKGRARITVTLSSKDPVDNLEFQLKLPNGLSVERTTMRPSSKPSVPLQIVEDSDGTSTIYWLGIAFTKRKGGKLRFRVKVKADECAPETLAVDAFAYLVNAT--AASCITPLVNAAIVKVRY--------SKLDKAATCAPTPAPSINPTQPFVLFGAGQRFSQGGRLAPFQNRRLSARSGMNTHGTLAALSQPRDRHLQ----SIDTPEACYEYCSLNAGEETPFFFSWNIVTRQCFCCVAVCTPFVFDPDSNVYEALL 317          
The following BLAST results are available for this feature:
BLAST of NO13G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26413.13.900e-8554.10hypothetical protein Naga_101468g1, partial [Nanno... [more]
EWM25605.11.900e-7147.56hypothetical protein Naga_100543g1 [Nannochloropsi... [more]
EWM20109.11.100e-6849.02hypothetical protein Naga_101756g1, partial [Nanno... [more]
EWM20143.11.500e-6849.67hypothetical protein Naga_101529g1, partial [Nanno... [more]
EWM23483.11.400e-6647.33putative lipase, partial [Nannochloropsis gaditana... [more]
EWM26026.12.600e-6549.82hypothetical protein Naga_100629g4 [Nannochloropsi... [more]
XP_005852708.14.400e-6546.31hypothetical protein NGA_0705900, partial [Nannoch... [more]
EWM26431.14.400e-6546.77lipase [Nannochloropsis gaditana][more]
EWM21515.14.900e-6444.93hypothetical protein Naga_100317g3 [Nannochloropsi... [more]
EWM20839.13.200e-6347.14secreted protein [Nannochloropsis gaditana][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR057ngnoR057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00380.1NO13G00380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|117893gene_6977Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101305g2gene8708Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00380.1NO13G00380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00380 ID=NO13G00380|Name=NO13G00380|organism=Nannochloropsis oceanica|type=gene|length=3074bp
AGACACAGACACAAATACGGGCCGTCTGATAAGCTGATCCTCAACCGGAA
GCCATGTACCTGCCCCTCGTCCTTCCTCTGCTCGTCGTCCTGGGAGGTGC
GTGGGCACCTACCGCCATTGCCCAGGAGTGTCCCCGTCTGATTGTGGGCG
CCAAGGCACAACCTAACGGCAAGCGTGGCATCCTGGCAGGCCGACAGAAA
GCCAAGATTACCGTCAAAATACGAAGCAAGGAGGCAGCACAAGACGTCAA
TTTCAAGATGGAGCTGCCCGCTGGTTTGTCCGTGGTCAAGCTGAAGGCCC
GTCCGTTCCGCATGCTCTCCCCGGCGCAGATCATTCAGAACCCAGACGGG
ACAACGGCCATCTACTGGACGGATTTCGATTTCAAAAAGAGCTCGAAGCG
CGTCTTTCAGGCCGTGGTGATGGCCGATGACTGTGCCCCTGAGATGCTTG
ATGTCACAGCCCTGGCATATCTCGTCAACGCCACGGACCTGTCCGCCTAC
TGCGCTGTACCCTTGGTCGATCCTGTGGTCTTGCGTGTGCGATATCCAGG
CAACAAGAAGGTGTCTGAGCACGCCTTATCGAGATCTGTCACGTGCGCGC
CGACCCCGGCCCCGAGCGTCAATCCCGCAATTCCCTTCCAAATTTTTGGT
GAGGGGCAGCGATGCTTGCAAGCAGGACAACTGGCGCCCTTTGATCGCCG
TTTGTCGGCACTACATAATGCAGACGAGGGACTGAAATCGCTCAGCACTA
TTGACGGCCAGCATCGTCAGCTGCCTCCTGTGGAGATTAACAACCCGACG
GAGTGCTTCGACTACTGCTCGATCAATGGCAACGAACCGAGTCCATTTTT
CTTCAACTGGAACACAGCGACCAACCAGTGCTTTTGCTGCGGCGGAGAAT
GCGACTTGATTGTTGAGCCAGACTTCAATGCCTATAAGGTAGTCTTGGCG
GGGACCAGGGCCCCCACTGCGTCTCCTTCCATGAGTCCTACGACAGCACC
GATGCAGAGCCCCTCTGCTTCACCGACGGCCTCGCTCTCTGCTTCACCTA
CAGCCTCCCCCACGGCGTCGCCCACTGCTTCACCCACCGCGTCACCCACG
GCTTCACCCACGGCTATCCCCTCTGCGTCTCCAACACCAGCACCGATAGG
ACCGGGCGTCATCTGGACACAGCAAACAAACAGTACCCAGCAACAGTGGG
AGTCGATCACATCCTCGTCGGATGGCACGgtacgtggttggatccggggc
ttcacgcatggcgcacgacaccaccatcctgtatgctggtcgcgtcgtag
taagatgtatcgtcgagagtctatatgtgttgctctatctgacgcgccat
cttcgactacccatccaatcccccttagAAACTTGCCGCCGGGGCGCATG
AAGGCTTCATCTATACATCGACCGACTCGGGCGTCACCTGGACGCAGCAA
ACAAACAGTACCCAGCAACAGTGGGAGTCGATCGCATCCTCGTCGAATGG
CACGgtacgtggttggatccggggcttcacgcatggcgcacgacaccacc
atcctgtatgctggtcgcgtcgtagtaagatgtatcgtcgagagtctata
tgtgttgctctatctgacgcgccatcttcgactacttatcaaatccccct
tagAAACTTGCCGCCGCGGTGTATGAAGGCTTCATCTATACATCCACCGA
CTCGGGCGTCACCTGGACACAGCAAACAAACAGTACCCAGCAACAGTGGG
AGTCGATCGCATCCTCGTCGGATGGCACGgtacgtggttggatccggggc
ttcacgcatggcgcacgacaccaccatcctgtatgctggtcgcgtcatag
taagatatatcgtcgagagtctatatgttgctctatctgacgcgctatct
tcgccatctcatccaatcccccacagAAACTTGCCGCCCTCGTATATGAA
GGCTTCATCTATACATCGACCGACTCGGGCGTCACCTGGACGCAGCAAAC
CAACAGTACTCAACAAATCTGGCAGTCGATCACATCCTCGTCGGATGGCA
CGgtacgtggttggatccggggcttcacgcatggcgcacgacaccaccgt
ccttgaggctggtcgcgtcatagtaagatgtattctcgagagtctctatg
tgttgctctatctgacgcgccatcttcgactactcatccaatcccccaca
gAAACTTGCCGCCCTCGTGTATAACGGCTTCATCTATACATCCACCGACT
CGGGCGTTACCTGGACAAAGCAAACGAACAGTACCCAGCAAAAGTGGTAT
CGGATGGCATCCTCGTCGGATGGCACGgtacgtggttggatccggggctt
tgtccacagtgcacgatggcaatgtccttgaggctggtcgcgtcgtagat
gggtgtattctcgagagtctctatgtgtttctcacagatatctgacgcgc
catcttcgactacccatccactcccccttagAAACTTGCCGCCGGGGTGT
ATAACGGTTTCATCTATACGTCGACCGACTCGGGCGTCACCTGGACGCAG
CAAACAAACAGTACCCAGCAAATCTGGGAGTCGATCGCATCCTCGTCGGA
TGGCACGgtacgtggttggatcccgggcttcacgcatggcgcacgacacc
accatcctgtatgctggtcgcgtcgtagtaagatgtatcgtcgagagtct
ctatgtgttgctctatctgacgcgctatcttcgccatccaatcccccaca
gAAACTTGCCGCCGCGGTAAATGATGGCTTCATCCATACGTCGACCGACT
CGGGCGTCACCTGGACGCCGCAAAGCGACAGTACCCAGCAAAGCTGGTAT
GCGATCGCATCCTCGTCGGATGGCACGgtacgtggttggatccggggctt
cacgcatggcgcacaacaccaccgtccttgaggctggtcgcatcatagta
agatgtattctcgagagtctctatgtgttgctctatctgacgcgccatct
tcgactactcatcgaatcccccacagAAACTTGCCGCCGTAGTGTATGAT
GGCTTCATACACACGTCCCCCTAG
back to top

protein sequence of NO13G00380.1

>NO13G00380.1-protein ID=NO13G00380.1-protein|Name=NO13G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=660bp
MYLPLVLPLLVVLGGAWAPTAIAQECPRLIVGAKAQPNGKRGILAGRQKA
KITVKIRSKEAAQDVNFKMELPAGLSVVKLKARPFRMLSPAQIIQNPDGT
TAIYWTDFDFKKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYC
AVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGE
GQRCLQAGQLAPFDRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTE
CFDYCSINGNEPSPFFFNWNTATNQCFCCGGECDLIVEPDFNAYKVVLAG
TRAPTASPSMSPTTAPMQSPSASPTASLSASPTASPTASPTASPTASPTA
SPTAIPSASPTPAPIGPGVIWTQQTNSTQQQWESITSSSDGTKLAAGAHE
GFIYTSTDSGVTWTQQTNSTQQQWESIASSSNGTKLAAAVYEGFIYTSTD
SGVTWTQQTNSTQQQWESIASSSDGTKLAALVYEGFIYTSTDSGVTWTQQ
TNSTQQIWQSITSSSDGTKLAALVYNGFIYTSTDSGVTWTKQTNSTQQKW
YRMASSSDGTKLAAGVYNGFIYTSTDSGVTWTQQTNSTQQIWESIASSSD
GTKLAAAVNDGFIHTSTDSGVTWTPQSDSTQQSWYAIASSSDGTKLAAVV
YDGFIHTSP*
back to top
Synonyms
Publications