NO13G00010, NO13G00010 (gene) Nannochloropsis oceanica

Overview
NameNO13G00010
Unique NameNO13G00010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1634
Alignment locationchr13:292..1925 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:292..1925 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G00010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00010.1NO13G00010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00010.1NO13G00010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00010 ID=NO13G00010|Name=NO13G00010|organism=Nannochloropsis oceanica|type=gene|length=1634bp
AACACATCACACAGCAACCTCCGGCTCCATCATTACCACCGACCATGAAG
CTCACCCTGCGTACACTGGCCTTGGCTGCTGCCTTGTTGCCCTCGGTCCT
GGCCGGACGAGGAATCGACAAAGGGCTTGATATTGCAACCAACAAGAATA
CAACAAGCACCAAGCCAGTCCACGGTGACAAGAGCGGCAAGACGAAAACG
TTAGGCCCCGCCCGTTGgtaagaatcgaaggagtaccgagaaataaagtt
cgatcaacacttctggagaaataaacgacaaacatccaaactacaatcaa
attttaccagGAGCAATGCCAAGAAGGCTAACGCGGGTATCTTTATCGCC
GAAACACTCACTATTTCGGGTGATTCGGATGCTTCGGAAGCgtaagtagg
gatctgtgtttatatataccgataaattttaacaaatcacgaagcatcaa
aaaccgatttaccaatacctacatatgtcataataaatagGCTCGTCTAT
TCAAAGAAGGGGGCGAGTGTTTATGTGCGTTGCACGGGAAAGGATGCACC
AAACGTTGGCGGCGTGGATTGTAACTTTTCTCCCTGTGCACAAATCTATG
TTGAGGTCGATGACCCCGAAAATTGGTTCGGAGgtaagtgagctagggaa
gagaaataattgaagagctgggggaggtaaggcgttgaatagcgcttcta
cggtgggtatttaaatttctcccgtacatggtctaccacgtacacacact
aacatacccacaccacttctctctcacgtatgaacatgcagGTTGCAACA
ACGGTAACAGTCAATCTCCTGATCTGACAGATGTCGATGGCATTTGCTTT
TTCATTGACAGCGACAGCGGTGATGAGGTCTCGGAATGGTACTATGGTGG
CAGCATCATGAACAAGTCGGGCCGTTATATTTATGGCGACGgtaagagca
catggagagggaaatccgctgcttattcatttgtagttgttagtctgacg
cgatcatttacatttacgtaaaaatgtattccgttttatgtcgccacttt
tcttgtctctttttacgttttctcactttatgtcctccacatatcactag
CTTTGAGTATGATGACTGGTCAGCAACCTTTCGGCCAGAACAACACCTGC
TACTTCGGAGGGACCTTCTACGACCTTTTACCTAAGTTTGACTTGGACTC
TGCGAAGTATCAGAAACTTGCGGCCAAGCGCGGCGATTAAGTGGGACCCT
TTGCTTCGGCTTTGAGGACCCTTGGTCTACATGTTTCTTCGTTCACCCTC
TACAGTCCACTCATTCGTGGGGTGTCGTGTAATGTGTATGCATGTATGAG
GGCTCAGGGCCGATGGGGCTCGTACCCGTCCCTTTTGCCTCATCGCATGT
TTGTCTTATGTGTGTATGTGTGTTGAGGATGGGAATGATGGGTGGTGCTG
GTCGCCATCTCGCCATTTCTTTCCCAACTTTGTGTTTTATGTTTGACCAT
TCTGTTGAAACTCTTAGCACTCTGTTAGTGACTTGCCGTGCTTTGTCTCG
GTGGTTGATATTGGGAGTAAGGTTCGCTTGAAAGCAGCCAAAGAAAGAGC
AGAAGAGGTTTATGTTAAAGGGAATGCCTATGGG
back to top

protein sequence of NO13G00010.1

>NO13G00010.1-protein ID=NO13G00010.1-protein|Name=NO13G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=229bp
MKLTLRTLALAAALLPSVLAGRGIDKGLDIATNKNTTSTKPVHGDKSGKT
KTLGPARWSNAKKANAGIFIAETLTISGDSDASEALVYSKKGASVYVRCT
GKDAPNVGGVDCNFSPCAQIYVEVDDPENWFGGCNNGNSQSPDLTDVDGI
CFFIDSDSGDEVSEWYYGGSIMNKSGRYIYGDALSMMTGQQPFGQNNTCY
FGGTFYDLLPKFDLDSAKYQKLAAKRGD*
back to top
Synonyms
Publications