NO12G03960, NO12G03960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03960 vs. NCBI_GenBank
Match: EWM25630.1 (3-oxoacyl-(acyl-carrier-protein) reductase [Nannochloropsis gaditana]) HSP 1 Score: 458.4 bits (1178), Expect = 1.700e-125 Identity = 253/291 (86.94%), Postives = 265/291 (91.07%), Query Frame = 0 Query: 1 MLAR--ALALTTLVMLSSSSLAFVPPAFRATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIG 290 MLAR L T VM SSS+LAFV PA R TARS+G EK +VAIVTG SRGIGKACALELA++GVKVVVNYASSA+SALAVVEEIKALGSEAVAIKADMSKP EV+ALFKETAAAFKDPV+ILVNNAGITKDGLV+TMKPE WQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLG++SEVAGMVRFLA+DPAA YITGHSFDVDGGIAIG Sbjct: 26 MLARVCVLVATFFVMFSSSALAFVAPAVRMTARSAGXXXXXXXXXXEKANVAIVTGASRGIGKACALELAQHGVKVVVNYASSADSALAVVEEIKALGSEAVAIKADMSKPEEVEALFKETAAAFKDPVNILVNNAGITKDGLVMTMKPEAWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGRASEVAGMVRFLAVDPAAAYITGHSFDVDGGIAIG 316
BLAST of NO12G03960 vs. NCBI_GenBank
Match: GAX29363.1 (3-oxoacyl-[acyl-carrier protein] reductase [Fistulifera solaris]) HSP 1 Score: 305.1 bits (780), Expect = 2.400e-79 Identity = 176/294 (59.86%), Postives = 213/294 (72.45%), Query Frame = 0 Query: 2 LARALALTTLVMLSSSSLAFVPPAFRATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYAS--SAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291 L +L L L +S+ + P + ARSS + M+A E V +VTG SRG+G++ AL+L +G KVVVNY S S ESA VE+IKA G +A+A+KAD SK ++D +FK AF V +L+NNAGIT+D LV+ MKPE WQAVID NLSGVFY ++A + + R GRIINM+SVVGQIGNPGQANYAAAKGGVL +TKANAKEFAARGVTVNA+CPGFIESDMT L L+ + K IPL RLGK EVAGM RFLA+DPAA YITGH+F+VDGGIAIG+ Sbjct: 5 LLSSLFLLALPWTTSAFHSAFVPRRTSIARSSSTLSMVA----ENAKVIVVTGSSRGLGRSIALDLGSHGQKVVVNYVSDGSKESAEKTVEDIKAAGGDAIAVKADTSKIEDIDNMFKAAVDAF-GTVDVLINNAGITRDTLVMRMKPEQWQAVIDTNLSGVFYCTQAFFKLAAKKRTGRIINMSSVVGQIGNPGQANYAAAKGGVLAMTKANAKEFAARGVTVNAICPGFIESDMTSVLSEEYLEEVSKGIPLKRLGKPEEVAGMTRFLALDPAADYITGHTFNVDGGIAIGA 293
BLAST of NO12G03960 vs. NCBI_GenBank
Match: GAX26357.1 (3-oxoacyl-[acyl-carrier protein] reductase [Fistulifera solaris]) HSP 1 Score: 303.5 bits (776), Expect = 7.000e-79 Identity = 175/294 (59.52%), Postives = 213/294 (72.45%), Query Frame = 0 Query: 2 LARALALTTLVMLSSSSLAFVPPAFRATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYAS--SAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291 L +L L L +S+ + P + A+SS + M+A E V +VTG SRG+G++ AL+L +G KVVVNY S S ESA VE+IKA G +A+A+KAD SK ++D +FK AF V +L+NNAGIT+D LV+ MKPE WQAVID NLSGVFY ++A + + R GRIINM+SVVGQIGNPGQANYAAAKGGVL +TKANAKEFAARGVTVNA+CPGFIESDMT L L+ + K IPL RLGK EVAGM RFLA+DPAA YITGH+F+VDGGIAIG+ Sbjct: 5 LLSSLFLLALPWTTSAFHSAFVPRRTSIAQSSSTLSMVA----ENAKVIVVTGSSRGLGRSIALDLGSHGQKVVVNYVSDGSKESAEKTVEDIKAAGGDAIAVKADTSKIEDIDNMFKAAVDAF-GTVDVLINNAGITRDTLVMRMKPEQWQAVIDTNLSGVFYCTQAFFKLAAKKRTGRIINMSSVVGQIGNPGQANYAAAKGGVLAMTKANAKEFAARGVTVNAICPGFIESDMTSVLSEEYLEEVSKGIPLKRLGKPEEVAGMTRFLALDPAADYITGHTFNVDGGIAIGA 293
BLAST of NO12G03960 vs. NCBI_GenBank
Match: ABF73009.1 (plastid beta-ketoacyl-ACP reductase protein precursor [Karenia brevis]) HSP 1 Score: 302.8 bits (774), Expect = 1.200e-78 Identity = 163/268 (60.82%), Postives = 207/268 (77.24%), Query Frame = 0 Query: 27 RATARSSG-AMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291 RAT+ +G + + + A + V IVTGGSRG+GKA AL+LAK G K++VNYA+SA +A VVEEIK LG + VA++ADMS VD LFK A AF +PV +LVNNAGIT+D L + MKP W VI+ NL+GVF+A++AA+ VML+ R+GRIIN+ASVVG+IGNPGQANYAAAKGGV+ +T + A+EF +RG+TVNAV PGFIESDMT +L +D K IPLGR GK EVAG+V++LA+DP+ALYITGH +VDGGIAIG+ Sbjct: 63 RATSNLNGKRLSLSPSMADAEKPVVIVTGGSRGLGKAIALDLAKEGCKIIVNYAASAAAAEEVVEEIKKLGGDGVAVQADMSTKEGVDGLFKAAAEAFDEPVGVLVNNAGITRDALTMRMKPAQWTDVINTNLNGVFFAAQAASKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMSMAREFGSRGITVNAVAPGFIESDMTAELPQEIVDLQLKNIPLGRFGKPEEVAGLVKYLALDPSALYITGHCLNVDGGIAIGT 330
BLAST of NO12G03960 vs. NCBI_GenBank
Match: OSX79458.1 (hypothetical protein BU14_0076s0014 [Porphyra umbilicalis]) HSP 1 Score: 302.0 bits (772), Expect = 2.000e-78 Identity = 163/249 (65.46%), Postives = 198/249 (79.52%), Query Frame = 0 Query: 42 AAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291 AA VAIVTG SRGIGKA AL LA G KVVVNYA SA++A +VV +I+A G EA+A++ D+S+ A+V ALF +T A V +LVNNAGIT+D L++ MK WQ VID+NL+GVF ++AAA +M++AR GRI+N+ASVVGQIGNPGQ NYAAAKGGVLGLT A AKE A+RGVTVNAV PGFI SDMT +L LD IK IP+GRLG+++EVAGMV FLA DPAA Y+TGH+F+VDGGIAIG+ Sbjct: 108 AADGSPKVAIVTGASRGIGKAIALALAAAGCKVVVNYARSADAAASVVADIEAAGGEALAVRGDVSQAADVAALF-QTVVATYGAVDVLVNNAGITRDTLLMRMKQAQWQEVIDLNLTGVFLCTQAAAKLMIKARAGRIVNIASVVGQIGNPGQVNYAAAKGGVLGLTMATAKEVASRGVTVNAVAPGFIASDMTAELPLDKIKAMIPMGRLGEAAEVAGMVTFLATDPAAAYVTGHTFNVDGGIAIGA 355
BLAST of NO12G03960 vs. NCBI_GenBank
Match: XP_005758549.1 (hypothetical protein EMIHUDRAFT_438770 [Emiliania huxleyi CCMP1516] >EOD06120.1 hypothetical protein EMIHUDRAFT_438770 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 301.6 bits (771), Expect = 2.600e-78 Identity = 172/289 (59.52%), Postives = 212/289 (73.36%), Query Frame = 0 Query: 5 ALALTTLVMLSSSSLAFVPPAFRATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291 +LA+ + L S+S + A R A+ A R A + V IVTGGSRG+G+A AL L K G +VVVNYA+SA +A AVVEEIK LG + VA++ADMS P ++ LFK TA AF DPV +LVNNAGIT+D L+L MK + W+ VI+ NL+GVFYAS+AAA M +AR+GRIIN+ASVVG+IGNPGQANYAAAKGGV+ +T AKE A+RGVT NAV PGFI SDMT+ LD + + K IP GR GK EVAG+V+FLA+DPAA YITGH +VDGGIAIG+ Sbjct: 2 SLAMFMGLTLPSASALALGRAGRFAAQQRFAARGAVQMAADG-PVCIVTGGSRGLGRAIALSLGKEGCRVVVNYAASAAAAEAVVEEIKGLGGDGVAVQADMSSPEGINTLFKATADAFDDPVGVLVNNAGITRDTLILRMKQQQWEDVINTNLNGVFYASQAAAKTMCKARKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMTMAKELASRGVTCNAVAPGFISSDMTDVLDEKIVSEVMKGIPAGRFGKPEEVAGLVKFLALDPAADYITGHCINVDGGIAIGT 289
BLAST of NO12G03960 vs. NCBI_GenBank
Match: CBJ48414.1 (3-ketoacyl-(acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase [Ectocarpus siliculosus]) HSP 1 Score: 300.1 bits (767), Expect = 7.700e-78 Identity = 165/290 (56.90%), Postives = 216/290 (74.48%), Query Frame = 0 Query: 6 LALTTLVMLSSSSLAF-VPPAFRATARSSGAMRMMAAAA---GEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKD-PVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291 LA ++ ++ + AF VPPA R++ A ++ AA ++ +AIVTG SRG+G A A +LA G V+VNYA+S+ +A VV+ I+ G +A A+KAD+SK EV LF + AAAF D + ++VNNAGIT+D L + MKP+ WQ+VID+NLSGVFY S+AA +ML+ R+GRIIN++S+VG IGNPGQANYAAAK GV+G+T + A+EFAARGVTVNAVCPGFIESDMT LD D IKK IPLGRLGK E+AGMV+F+A + +A YITG +F VDGG+AIG+ Sbjct: 3 LATLSIACMAGYARAFVVPPAARSSFAQPAARAGLSTAAVGGSPRMSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKAAAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 292
BLAST of NO12G03960 vs. NCBI_GenBank
Match: XP_002180902.1 (3-oxoacyl-[acyl-carrier protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47554.1 3-oxoacyl-[acyl-carrier protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 299.7 bits (766), Expect = 1.000e-77 Identity = 160/246 (65.04%), Postives = 194/246 (78.86%), Query Frame = 0 Query: 49 VAIVTGGSRGIGKACALELAKYGVKVVVNYAS--SAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIG 290 V +VTG SRG+GKA AL+L K G KV++NY S S E A A VEEIK+LG +A+AI+AD SKP + ++F+E F V +L+NNAGIT+D LV+ MKP+ WQ VIDINLSGVFY S+A V + R GRIIN++SVVGQIGNPGQANYAAAKGGV+G+T +NAKEFAARG+TVNA+CPG+IESDMT LD L+ + + IPL RLGK EVAGM RFLA+DPAA YITGH+F+VDGGIAIG Sbjct: 8 VVLVTGSSRGLGKAIALDLGKAGQKVIINYVSDGSKEGADAAVEEIKSLGGDAIAIQADSSKPDSIKSMFEEAVEKF-GTVDVLINNAGITRDTLVMRMKPQQWQDVIDINLSGVFYCSQAFFKVASKKRTGRIINISSVVGQIGNPGQANYAAAKGGVIGMTYSNAKEFAARGITVNAICPGYIESDMTAVLDEAYLEKVAEIIPLKRLGKPEEVAGMARFLALDPAADYITGHTFNVDGGIAIG 252
BLAST of NO12G03960 vs. NCBI_GenBank
Match: XP_009035294.1 (hypothetical protein AURANDRAFT_23580 [Aureococcus anophagefferens] >EGB10505.1 hypothetical protein AURANDRAFT_23580 [Aureococcus anophagefferens]) HSP 1 Score: 297.0 bits (759), Expect = 6.500e-77 Identity = 160/243 (65.84%), Postives = 190/243 (78.19%), Query Frame = 0 Query: 51 IVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291 +VTG SRGIG+A AL+L G VVVNYA+S AL VVE IKA G +AVA+KADM+ E+ ALFKETA F +LVNNAGITKDGL + MKP WQAVID+NLSGVFY S+AA + M + R GRIINM+SVVG GNPGQANYAAAKGGV GLT +NAKEFA RGVTVNAVCPGFI ++M +L L+ +K+AIPLGRLG++ EVAG+VR+LA+D +A YITGHS +DGGIAIG+ Sbjct: 9 VVTGASRGIGRAIALDLGAQGCNVVVNYAASEGPALEVVEAIKASGGDAVAVKADMASVDEIKALFKETADHF-GGCDVLVNNAGITKDGLAMRMKPAQWQAVIDVNLSGVFYCSQAAFTQMAKKRAGRIINMSSVVGLFGNPGQANYAAAKGGVCGLTMSNAKEFAGRGVTVNAVCPGFIGTEMANELGEDMLNKVKEAIPLGRLGEADEVAGLVRYLALDKSAAYITGHSMTIDGGIAIGA 250
BLAST of NO12G03960 vs. NCBI_GenBank
Match: KOO24104.1 (hypothetical protein Ctob_001628 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 296.6 bits (758), Expect = 8.500e-77 Identity = 161/267 (60.30%), Postives = 202/267 (75.66%), Query Frame = 0 Query: 27 RATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291 R+ A +S A + A G V IVTGGSRG+G+A AL L K KVVVNYA+SA +A VVEEIKA+G + VA++AD ++ LFK TA + +PV +LVNNAGIT+D LVL MKP WQ VID+NL+GVFYAS+AA +M++AR+GRIIN ASVVG+ GN GQANYAAAKGGV+ +T + A+E +RGVTVNA+ PGFIESDMT +L +DG+ K IPLGR GK EVAG+V++LA+DP+ALYITGH +VDGGIAIG+ Sbjct: 21 RSLAVTSRAATPVMEATG---PVCIVTGGSRGLGRAIALALGKEKCKVVVNYAASAAAAEKVVEEIKAMGGDGVAVQADTGTQEGIEKLFKATAEKWDEPVGVLVNNAGITRDTLVLRMKPSQWQEVIDVNLNGVFYASQAATKIMMKARKGRIINTASVVGRFGNIGQANYAAAKGGVIAMTMSMARELGSRGVTVNAIAPGFIESDMTAELPKEIVDGVMKNIPLGRFGKPDEVAGLVKYLALDPSALYITGHCINVDGGIAIGT 284 The following BLAST results are available for this feature:
BLAST of NO12G03960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03960 ID=NO12G03960|Name=NO12G03960|organism=Nannochloropsis oceanica|type=gene|length=3061bpback to top protein sequence of NO12G03960.1 >NO12G03960.1-protein ID=NO12G03960.1-protein|Name=NO12G03960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top Synonyms
Publications
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