Naga_100037g12, gene4871 (gene) Nannochloropsis gaditana

Overview
NameNaga_100037g12
Unique Namegene4871
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:1038474..1040832 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100037g12
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:1038474..1040832 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009987cellular process
GO:0006629lipid metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03960NO12G03960Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5045rna5045-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5045rna5045Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5045

>rna5045-protein ID=rna5045-protein|Name=rna5045|organism=Nannochloropsis gaditana|type=polypeptide|length=405bp
MSSLKSSVQDAHCTVNRHKLRPSEEMLARVCVLVATFFVMFSSSALAFVA
PAVRMTARSAGALRMMAADAGEKANVAIVTGASRGIGKACALELAQHGVK
VVVNYASSADSALAVVEEIKALGSEAVAIKADMSKPEEVEALFKETAAAF
KDPVNILVNNAGITKDGLVMTMKPEAWQAVIDINLSGVFYASKAAASVML
RARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTV
NAVCPGFIESDMTEKLDLDGIKKAIPLGRLGRASEVAGMVRFLAVDPAAA
YITGHSFDVDGGIAIGFGVDDSVITVKREYCCLQCMCDMCLACVGESGDA
EVYSPQKSLKTSELQSIETAMIVGLQSVAKTGSYTSIQRRDAIVNSVMCA
VIKLC
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Synonyms
Publications