NO12G03930, NO12G03930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03930 vs. NCBI_GenBank
Match: XP_005854806.1 (CCR4-NOT transcription complex subunit 7/8 [Nannochloropsis gaditana CCMP526] >EKU21555.1 CCR4-NOT transcription complex subunit 7/8 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 559.7 bits (1441), Expect = 9.100e-156 Identity = 262/296 (88.51%), Postives = 281/296 (94.93%), Query Frame = 0 Query: 125 EGGEIPGIGPTRHIYTSPDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNKMQATNRQQQG 421 E GEIPG+GPTRHIYT DGKRMEIREVW+ENLD EM A+REVVE+YPYVAMDTEFPGVVARPVGDV+A+DYQYKTLKCNVDLLKIIQLGLSFAD++GNSPP+CPTWQ NF+FSL+DD+YAEDSIELLKQSGIDFSKHE HGIDV RFGELLMTSGLVLMD+VRWISFHSGYDFGYLLKVLTC+ALP+DENGFFDLLRTYFPCFYDIKYLMTAC GLHGGLQ+IAEELSVAR+GPMHQAGSDSLLTAQTFFRLC VSF+GL NLSDEKFKGELFGLGHNHTVYR+KMQ TNR G Sbjct: 164 EKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHG 459
BLAST of NO12G03930 vs. NCBI_GenBank
Match: EWM25650.1 (ccr4-associated factor [Nannochloropsis gaditana]) HSP 1 Score: 559.7 bits (1441), Expect = 9.100e-156 Identity = 262/296 (88.51%), Postives = 281/296 (94.93%), Query Frame = 0 Query: 125 EGGEIPGIGPTRHIYTSPDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNKMQATNRQQQG 421 E GEIPG+GPTRHIYT DGKRMEIREVW+ENLD EM A+REVVE+YPYVAMDTEFPGVVARPVGDV+A+DYQYKTLKCNVDLLKIIQLGLSFAD++GNSPP+CPTWQ NF+FSL+DD+YAEDSIELLKQSGIDFSKHE HGIDV RFGELLMTSGLVLMD+VRWISFHSGYDFGYLLKVLTC+ALP+DENGFFDLLRTYFPCFYDIKYLMTAC GLHGGLQ+IAEELSVAR+GPMHQAGSDSLLTAQTFFRLC VSF+GL NLSDEKFKGELFGLGHNHTVYR+KMQ TNR G Sbjct: 11 EKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHG 306
BLAST of NO12G03930 vs. NCBI_GenBank
Match: CEG62914.1 (Putative CCR4-NOT transcription complex subunit 7 [Rhizopus microsporus]) HSP 1 Score: 371.7 bits (953), Expect = 3.500e-99 Identity = 177/272 (65.07%), Postives = 215/272 (79.04%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL-----GHNHTVYRNKMQAT 415 I+EVW ENL+ EM +R++VE YPY+AMDTEFPGVVARP+G T++DY Y+TL+CNVDLLKIIQLG++FAD GN P + TWQ NFKFSL DDMYA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLK+LTCS +PADE+ FFDLLRTYFPC YDIKYLM +C L GGLQ IA++L VARIGP HQAGSDSLLT TFF++ + F + D+K+ G L+GL N+T+ ++ AT Sbjct: 9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGSFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQHGNLPGNVCTWQFNFKFSLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKILTCSVMPADESEFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DKIDDQKYLGYLYGLKCSPTNSNNTIMKSLTTAT 278
BLAST of NO12G03930 vs. NCBI_GenBank
Match: OBZ89232.1 (CCR4-NOT transcription complex subunit 7 [Choanephora cucurbitarum]) HSP 1 Score: 371.7 bits (953), Expect = 3.500e-99 Identity = 177/270 (65.56%), Postives = 213/270 (78.89%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL----GHNHTVYRNKMQA 414 I+EVW ENL+ EM +R++VE YPY+AMDTEFPGVVARP+G T++DY Y+TL+CNVDLLKIIQLG++FAD GN P + TWQ NFKF+L DDMYA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLKVLTCS +PADE FF+LLRTYFPC YDIKYLM +C L GGLQ IA++L VARIGP HQAGSDSLLT TFF++ + F + D+K+ G L+GL H HT + +QA Sbjct: 9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGTFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQYGNLPGNICTWQFNFKFNLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSLMPADETEFFELLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DRIDDQKYLGYLYGLKCSPQHTHTTHHQALQA 276
BLAST of NO12G03930 vs. NCBI_GenBank
Match: ORE22406.1 (CAF1-domain-containing protein [Rhizopus microsporus]) HSP 1 Score: 371.3 bits (952), Expect = 4.600e-99 Identity = 177/272 (65.07%), Postives = 215/272 (79.04%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL-----GHNHTVYRNKMQAT 415 I+EVW ENL+ EM +R++VE YPY+AMDTEFPGVVARP+G T++DY Y+TL+CNVDLLKIIQLG++FAD GN P + TWQ NFKFSL DDMYA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLK+LTCS +PADE+ FFDLLRTYFPC YDIKYLM +C L GGLQ IA++L VARIGP HQAGSDSLLT TFF++ + F + D+K+ G L+GL +N+T ++ AT Sbjct: 9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGSFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQHGNLPGNVCTWQFNFKFSLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKILTCSVMPADESEFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DKIDDQKYLGYLYGLKCSPTNNNNTTMKSLTTAT 278
BLAST of NO12G03930 vs. NCBI_GenBank
Match: XP_009033148.1 (hypothetical protein AURANDRAFT_52324 [Aureococcus anophagefferens] >EGB12052.1 hypothetical protein AURANDRAFT_52324 [Aureococcus anophagefferens]) HSP 1 Score: 370.2 bits (949), Expect = 1.000e-98 Identity = 173/273 (63.37%), Postives = 214/273 (78.39%), Query Frame = 0 Query: 139 YTSPDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPD-CPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNK 411 + DGK +EI++VW LD EM IRE+VE YPYVAMDTEFPGVVA+P+GD + YQY+TL+CNVDLLKIIQLG+SF D EG +P + C +Q NF+F L +DMYAEDSI+LLK+SGIDF +H GIDV RFGEL+M SGLVL DDV+W+SFHSGYDFGYL+K+LTC LPADE GFF+LL YFP YD+K LMT +GLHGGLQ++AE+L V RIGPMHQAGSDS+LT TFFRL ++F+ + +EK++G ++GLG + YR K Sbjct: 45 FPDKDGKMVEIKDVWASTLDAEMAVIRELVESYPYVAMDTEFPGVVAKPIGDAYSTGYQYQTLQCNVDLLKIIQLGISFCDGEGKTPEEGCYCFQFNFRFDLAEDMYAEDSIQLLKESGIDFHRHATEGIDVARFGELVMMSGLVLCDDVKWVSFHSGYDFGYLIKILTCQTLPADEQGFFELLALYFPTLYDVKLLMTHVDGLHGGLQRVAEDLKVERIGPMHQAGSDSMLTNATFFRLAELAFSSPEKV-EEKYRGAIYGLGEH--AYRGK 314
BLAST of NO12G03930 vs. NCBI_GenBank
Match: KFH71636.1 (hypothetical protein MVEG_01932 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 370.2 bits (949), Expect = 1.000e-98 Identity = 171/258 (66.28%), Postives = 210/258 (81.40%), Query Frame = 0 Query: 145 KRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLG 402 +R IREVW ENLD EM +R++V++YPY+AMDTEFPGVVARP+G+ T+ADY Y+TL+CNVDLLK+IQLG++FAD GN P D TWQ NFKF+L DDMYA+DSI+LL++SGI+F KHE +GIDV FGELL++SG VL+D+V+WISFHSGYDFGYLLK+LTCS LPA+E FFDLLRTYFPC YDIKYLM +C L GGLQ++A +L V RIGP HQAGSDSLLT TFF++ + F + D K+ G L+GLG Sbjct: 6 ERAIIREVWAENLDQEMALLRDLVDQYPYLAMDTEFPGVVARPIGNFRTSADYHYQTLRCNVDLLKMIQLGVTFADENGNVPKDACTWQFNFKFNLADDMYAQDSIDLLQKSGINFQKHEDYGIDVHHFGELLISSGFVLLDEVKWISFHSGYDFGYLLKILTCSPLPAEEGDFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQELANDLQVVRIGPQHQAGSDSLLTCSTFFKMRQIFFE--DKIDDAKYLGYLYGLG 261
BLAST of NO12G03930 vs. NCBI_GenBank
Match: CBN76829.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 369.8 bits (948), Expect = 1.300e-98 Identity = 175/272 (64.34%), Postives = 213/272 (78.31%), Query Frame = 0 Query: 139 YTSPDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPD-CPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNL----SDEKFKGELFGLGHNHT 406 + +PDG+ +EIR VW +NL+ EM IRE+VE YPYVAMDTEFPGVVARPVGD D+QY+TL+CNVD+LK+IQLGLSFA+ +G P D C TWQ NF F+L++DMYA DSI+LLK SGIDF HE GID+ FGELLMTSGLVL+ +V W+SFHSGYDFGYL+K+LTCS LP E+ FFDLL+ YFP YDIKYL+++ +G HGGL K+A++L V RIGPMHQAGSDSLLT Q F ++ V FNG+ NL S KF G+L+G G N T Sbjct: 47 HRAPDGRLVEIRNVWADNLETEMVIIRELVEDYPYVAMDTEFPGVVARPVGDFNQPDFQYQTLRCNVDMLKMIQLGLSFANEKGELPEDGCCTWQFNFAFNLSEDMYAHDSIQLLKNSGIDFQGHERRGIDLQDFGELLMTSGLVLLPNVTWLSFHSGYDFGYLIKLLTCSNLPTQESDFFDLLQLYFPKIYDIKYLVSSQDGFHGGLNKLADDLKVERIGPMHQAGSDSLLTEQVFLKVADVYFNGVANLDQGKSRGKFAGQLYGYGGNQT 318
BLAST of NO12G03930 vs. NCBI_GenBank
Match: SAL99335.1 (hypothetical protein [Absidia glauca]) HSP 1 Score: 368.6 bits (945), Expect = 3.000e-98 Identity = 178/277 (64.26%), Postives = 219/277 (79.06%), Query Frame = 0 Query: 142 PDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL--GHNHTVYRNKMQATN 416 P IREVW ENLD EM +R++VE YPY++MDTEFPGVVARP+G T++DY Y+TL+CNVDLLK+IQLG++FAD GN P + TWQ NFKF+L +DMYA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLKVLTCS++PADE+ FFDLLRTYFPCFYDIKYLM +C L GGLQ IA++L VARIGP HQAGSDSLLT TFF++ + F + ++K+ G ++GL G N +V ++ ATN Sbjct: 2 PTNDSKYIREVWAENLDEEMVYMRDLVEDYPYLSMDTEFPGVVARPIGTFRTSSDYHYQTLRCNVDLLKVIQLGVTFADQYGNLPGNICTWQFNFKFNLEEDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSSMPADESEFFDLLRTYFPCFYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCSTFFKMRQMFFE--DKIDNQKYLGYIYGLRCGPNTSV-QSLTNATN 275
BLAST of NO12G03930 vs. NCBI_GenBank
Match: CEP13830.1 (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 367.9 bits (943), Expect = 5.100e-98 Identity = 172/253 (67.98%), Postives = 207/253 (81.82%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL 401 I+EVW ENL+ EM +R++VE YPY+AMDTEFPGVVARP+G T++DY Y+TL+CNVDLLKIIQLG++FAD GN P + TWQ NFKF+L+DDMYA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLKVLTCS +PADE FF+LLRTYFPC YDIKYLM +C L GGLQ IA++L VARIGP HQAGSDSLLT TFF++ + F + D+K+ G L+GL Sbjct: 9 IKEVWAENLEEEMAYLRDLVEEYPYLAMDTEFPGVVARPIGTFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQYGNLPGNICTWQFNFKFNLSDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSVMPADETEFFELLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DRIDDQKYLGYLYGL 259 The following BLAST results are available for this feature:
BLAST of NO12G03930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03930 ID=NO12G03930|Name=NO12G03930|organism=Nannochloropsis oceanica|type=gene|length=3326bpback to top protein sequence of NO12G03930.4 >NO12G03930.4-protein ID=NO12G03930.4-protein|Name=NO12G03930.4|organism=Nannochloropsis oceanica|type=polypeptide|length=457bpback to top protein sequence of NO12G03930.3 >NO12G03930.3-protein ID=NO12G03930.3-protein|Name=NO12G03930.3|organism=Nannochloropsis oceanica|type=polypeptide|length=444bpback to top protein sequence of NO12G03930.2 >NO12G03930.2-protein ID=NO12G03930.2-protein|Name=NO12G03930.2|organism=Nannochloropsis oceanica|type=polypeptide|length=492bpback to top protein sequence of NO12G03930.1 >NO12G03930.1-protein ID=NO12G03930.1-protein|Name=NO12G03930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bpback to top Synonyms
Publications
|