NO12G03570, NO12G03570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03570 vs. NCBI_GenBank
Match: EWM25686.1 (Putative small multi-drug export [Nannochloropsis gaditana]) HSP 1 Score: 312.4 bits (799), Expect = 1.800e-81 Identity = 155/197 (78.68%), Postives = 176/197 (89.34%), Query Frame = 0 Query: 145 TSIPQALAAAVEKGEHLHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNVPWLMEKVTPVLEKKLKDMTGARMNWQALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGLWGAVAVGGGLLVSLVVQQLSKRGKDQK 342 TS+P+ALAAAVE GEHLHLGQR+A + +TGWP+WV LM ISALPVVELRGGVPVGLWMGIP AQTF LAC+GN +PVP IL++L+N PWLMEKVTPVLEKKLKD TGA+MNWQALA+FVGVPLPGTGAWTGAAIAALFKLSYAES G+VVGI+SAAAIMTALV AG+WGA+AVGGGLL+S QQL +R K++K Sbjct: 136 TSVPRALAAAVEHGEHLHLGQRVAKTIGTRTGWPNWVTLMAISALPVVELRGGVPVGLWMGIPAAQTFLLACLGNLIPVPLILLVLRNTPWLMEKVTPVLEKKLKDTTGAKMNWQALAIFVGVPLPGTGAWTGAAIAALFKLSYAESFLGIVVGILSAAAIMTALVKAGMWGAIAVGGGLLISFAAQQLGER-KEKK 331
BLAST of NO12G03570 vs. NCBI_GenBank
Match: CBN77178.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 145.2 bits (365), Expect = 3.700e-31 Identity = 84/188 (44.68%), Postives = 117/188 (62.23%), Query Frame = 0 Query: 149 QALAAAVEKGEHLHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNVPWLMEKVTPVLEKKLKDMTG---ARMNWQALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGLWGAVAVGGGLLVSLVVQQL 334 +A+ A E HLH+GQ++A R + G PDW LM ISA+PVVELRGGVPVG+WMG+P A+ F L GN +P+P IL+ L++ ++ + PVL++ + G + AL +FVG+PLPGTGAWTGA A L + + +++ + VG+VSA IM+ L LAG GA+ L V V L Sbjct: 139 KAIVAGSEDEAHLHVGQKVAKFFR-RGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRS-SFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTNIL 324
BLAST of NO12G03570 vs. NCBI_GenBank
Match: OLP83814.1 (hypothetical protein AK812_SmicGene35375 [Symbiodinium microadriaticum]) HSP 1 Score: 139.8 bits (351), Expect = 1.600e-29 Identity = 86/189 (45.50%), Postives = 117/189 (61.90%), Query Frame = 0 Query: 150 ALAAAVEKGEHLHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNVPWLMEKVTPVLEKKLK--DMTGARMNWQALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGLWGAVAVGGGLLVSLVVQQLSKR 337 A AAAV HLG RLA ++ PDW ILM+ISALP+VELRGGVPVGLWMG+ Q L +GN +P+P IL L+ + + + ++P+L++ + + GA W +A FVGVPLPGTGAWTGA +A L + E++ V+ G+V AA IM +L LAG +G V +V+L + L R Sbjct: 123 AKAAAV--AARPHLGIRLATKMKTCFSIPDWAILMMISALPLVELRGGVPVGLWMGLAVPQVMLLCILGNMIPIPLILAALR-IEQMKQLLSPLLKRAAQKTEPIGAHDRWVGVAAFVGVPLPGTGAWTGAMVAYLLGMDLWEAITSVLAGVVVAACIMASLTLAGWYGCAFVVMLGIVALASRWLQMR 308
BLAST of NO12G03570 vs. NCBI_GenBank
Match: OEU17081.1 (ferredoxin NADP reductase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 137.5 bits (345), Expect = 7.700e-29 Identity = 82/186 (44.09%), Postives = 111/186 (59.68%), Query Frame = 0 Query: 150 ALAAAVEKGEHLHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNVPWLMEKVTPVLEKKLKDMTG-----ARMNWQALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGLWGAVAVGGGLLVSLVV 331 A A VE EHLH GQ++AN + G P W +L ISA+PVVELRG +PVG+WMG+P Q +GN +P+ +L LLKN P L + ++P+L + K G W +LA FVG+PLPGTGAWTGA + L + +L + G+VSA IMTAL LAG GG + +S+++ Sbjct: 120 AKKAVVETVEHLHTGQKIANFF-MSFGLPKWAVLATISAMPVVELRGAIPVGVWMGLPIQQVLLTCVIGNMIPIVPLLFLLKN-PSLKKLMSPILNRAEKKAAGLGVGSLEKQWVSLAAFVGIPLPGTGAWTGAMGSFLLGMPTLFALSSIFAGVVSAGLIMTALTLAG-----RTGGLIAISVLI 298
BLAST of NO12G03570 vs. NCBI_GenBank
Match: GAX17478.1 (ferredoxin--NADP+ reductase [Fistulifera solaris]) HSP 1 Score: 134.4 bits (337), Expect = 6.600e-28 Identity = 82/182 (45.05%), Postives = 115/182 (63.19%), Query Frame = 0 Query: 161 LHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNVPWLMEKVTPVL---EKKLKDM--TGARMNWQALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGLWGAVAVGGGLLVSLVVQQLSKRG 338 LHLGQ++AN R G PD +L +ISALP+VELRG +PVG+WMG+P ++ + +GN +P+ +L+LL+N L + P+L EKK K++ + W +LA FVG+PLPGTGAWTGA A L + A + + G+VSA IMTA+ LAG G +A LL+ + +LSK G Sbjct: 117 LHLGQKIANYFRT-FGIPDLGVLTIISALPIVELRGAIPVGIWMGLPISKVLPVCILGNMIPILPLLLLLRN-KTLKNAMNPILTQAEKKTKELGIGSVQKQWASLATFVGIPLPGTGAWTGAMGAFLLGMPLAVAFTSIFAGVVSAGVIMTAITLAGKAGGIAALAALLLYAGI-ELSKGG 295
BLAST of NO12G03570 vs. NCBI_GenBank
Match: GAX13963.1 (ferredoxin--NADP+ reductase [Fistulifera solaris]) HSP 1 Score: 134.4 bits (337), Expect = 6.600e-28 Identity = 82/182 (45.05%), Postives = 115/182 (63.19%), Query Frame = 0 Query: 161 LHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNVPWLMEKVTPVL---EKKLKDM--TGARMNWQALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGLWGAVAVGGGLLVSLVVQQLSKRG 338 LHLGQ++AN R G PD +L +ISALP+VELRG +PVG+WMG+P ++ + +GN +P+ +L+LL+N L + P+L EKK K++ + W +LA FVG+PLPGTGAWTGA A L + A + + G+VSA IMTA+ LAG G +A LL+ + +LSK G Sbjct: 117 LHLGQKIANYFRT-FGIPDLGVLTIISALPIVELRGAIPVGIWMGLPISKVLPVCILGNMIPILPLLLLLRN-KTLKNAMNPILTQAEKKTKELGIGSVQKQWASLATFVGIPLPGTGAWTGAMGAFLLGMPLAVAFTSIFAGVVSAGVIMTAITLAGKAGGIAALAALLLYAGI-ELSKGG 295
BLAST of NO12G03570 vs. NCBI_GenBank
Match: XP_005535525.1 (similar to small multidrug export protein qacE [Cyanidioschyzon merolae strain 10D] >BAM79239.1 similar to small multidrug export protein qacE [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 130.6 bits (327), Expect = 9.500e-27 Identity = 79/187 (42.25%), Postives = 109/187 (58.29%), Query Frame = 0 Query: 144 TTSIPQALAAAVEKGEH-LHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNVPWLMEKVTPVLEKKLKDMTG----ARMNWQALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGLWGAVAVGGGLL 326 T +P A +H HLG R+A +R +T PDW LM++SALPVVELRGGVPVGLW+G+ PA+TF +GN +P+PF++ L++ + P+L+ + + ALA+FVGVPLPGTGAW+GA A L ++ +L + G+ A IM ALVL G G + V LL Sbjct: 58 TVRVPVATVGVGSVEQHQKHLGHRIAFWLRRETRLPDWATLMLVSALPVVELRGGVPVGLWLGLSPAETFLFCVIGNMLPIPFLVFGLRH-ERMRRLARPLLDSVARRLPSHANTPSSQALALALFVGVPLPGTGAWSGAIAAFLLQMDIWLALVSIAAGVAIAGCIMIALVLMGRIGGLIVAFALL 243
BLAST of NO12G03570 vs. NCBI_GenBank
Match: GAQ78820.1 (hypothetical protein KFL_000190380 [Klebsormidium nitens]) HSP 1 Score: 125.9 bits (315), Expect = 2.300e-25 Identity = 77/190 (40.53%), Postives = 113/190 (59.47%), Query Frame = 0 Query: 158 GEHLHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNV-PWLME------KVTPVLEKKLKDMTGARMNWQ--ALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGLWGAVAVGGGLLVSLVVQQLSKRGK 339 G HL LGQR+A A+R G PDWV +++++ALPVVELRG +PVG W+G+ P Q + LA +GN +P+PF++ + V WL++ K L K+ + + ++ L +FV VPLP TGAW+GA A L L + ES+ + G++ A AI+TAL G GA+ G GL + + + R K Sbjct: 77 GGHLSLGQRIAVALR-SLGLPDWVTIILVAALPVVELRGAIPVGYWLGLKPIQVYGLAVLGNMLPIPFVIAYVGKVSDWLVQRSGLAKKFFEWLFKRTRSRADLLVKYRTLGLTLFVAVPLPLTGAWSGAIGAHLLGLPFWESIAANLAGVMIAGAIVTALCELGYAGALIAGAGLFTAAIAAFWTSRRK 265
BLAST of NO12G03570 vs. NCBI_GenBank
Match: GAU46314.1 (hypothetical protein TSUD_243360 [Trifolium subterraneum]) HSP 1 Score: 119.4 bits (298), Expect = 2.200e-23 Identity = 67/171 (39.18%), Postives = 100/171 (58.48%), Query Frame = 0 Query: 153 AAVEKGEHLHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNVPWLMEKVTP-------VLEKKLKDMTG--ARMNWQALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGL 315 AAV+ + G ++AN++R K GWPDWV++ ++ LPV+ELRG +PVG W+ + PA L+ +GN VPVPFI++ LK + +P +L K K+ G W L +FV VP PGTGAWTGA IA++ ++ + ++ G+V A ++ LV GL Sbjct: 5 AAVDSIKASGFGLKIANSLR-KLGWPDWVVVFTLATLPVLELRGAIPVGYWLQLNPATLTVLSILGNMVPVPFIILYLKRFASFLASKSPSASRLLDILFKNAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAIIASILEMPFWAAVSANFFGVVFAGLLVNLLVNLGL 174
BLAST of NO12G03570 vs. NCBI_GenBank
Match: XP_003613520.2 (uncharacterized protein LOC11414720 [Medicago truncatula] >AES96478.2 small multi-drug export protein, putative [Medicago truncatula]) HSP 1 Score: 115.9 bits (289), Expect = 2.400e-22 Identity = 67/177 (37.85%), Postives = 100/177 (56.50%), Query Frame = 0 Query: 154 AVEKGEHLHLGQRLANAVRVKTGWPDWVILMVISALPVVELRGGVPVGLWMGIPPAQTFALACVGNFVPVPFILMLLKNVPWLMEKVTP-------VLEKKLKDMTG--ARMNWQALAVFVGVPLPGTGAWTGAAIAALFKLSYAESLFGVVVGIVSAAAIMTALVLAGLWGAVAVG 322 AV+ + G ++AN++R K GWPDWV++ ++ LPV+ELRG +PVG W+ + PA L+ +GN VPVPFI++ LK + +P +L K K G W L +FV VP PGTGAW+GA IA++ + + ++ G+V A ++ LV GL A+ G Sbjct: 113 AVDSIKASGFGLKIANSLR-KLGWPDWVVVFTLATLPVLELRGAIPVGYWLQLDPASLTVLSILGNMVPVPFIILYLKRFASFLASKSPSASRFLDILFKNAKAKAGPVEEFQWLGLMLFVAVPFPGTGAWSGAIIASILDMPFWPAVSANFFGVVFAGMLVNLLVNLGLKYAIITG 288 The following BLAST results are available for this feature:
BLAST of NO12G03570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03570 ID=NO12G03570|Name=NO12G03570|organism=Nannochloropsis oceanica|type=gene|length=1112bpback to top protein sequence of NO12G03570.1 >NO12G03570.1-protein ID=NO12G03570.1-protein|Name=NO12G03570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bpback to top Synonyms
Publications
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