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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr12 | genome | chr12:948655..951332 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO12G03470 vs. NCBI_GenBank
Match: EWM25702.1 (hypothetical protein Naga_100222g9 [Nannochloropsis gaditana]) HSP 1 Score: 81.6 bits (200), Expect = 1.100e-11 Identity = 72/242 (29.75%), Postives = 95/242 (39.26%), Query Frame = 0
Query: 1 MASNSNCPYTAAAAP-PTPSINDED-------IVPLKTLSRGVVQAYRGVVERVLPAFAALLQLDHSDGLSEAETEASTQRLKLLWLNSMKKRFGVDLGTMVMSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRAIKASQLSRTFRWTSPPRPAGSSRRERIRQRHD----VEGKEEGEEGDGRGVRLGRPRSYMAPP 231
MA N A+P +P I+ D I K LSRGV+ AYR VVE+VLP FA LQLD S GLS + E Q+LK LWL +MK++ GVDLG + MS+A + +K +Q SRTFRW SPPR + + +R + G+ + G GRP ++M PP
Sbjct: 1 MAFNGVLEEVGTASPLVSPGISGGDMDEESGLIARPKRLSRGVILAYRSVVEQVLPTFAVALQLDKSTGLSSGDAEHGAQKLKDLWLKAMKEKLGVDLGVLSMSEA--------------------TLPLNEEEGQGGAREDVNLPRDGRVLDADREKEGDDEEEKAEIMGEEERRVEGLKVAQASRTFRWLSPPRRPFRAPNDGLRGNSGEGVRLPGRIRQADRQGGPSPWGRPLNFMPPP 222
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03470 ID=NO12G03470|Name=NO12G03470|organism=Nannochloropsis oceanica|type=gene|length=2678bp
AACAGGAGGATCAGCAAGACGACGAAAAAGACGACGATACCAACAATCTG
GACGTGCCCGAAGTAGCCTTCTCCCGCTGATGGTCGTGCTTTCGTCACCC
CACCATCATACAGTCCCGCCATACTGCACGGCTCCTTTGTTCCTCGCTAG
CTAAGCCCCAAGCACGCCATGGCAAGCAACAGCAACTGCCCCTACACCGC
AGCGGCAGCGCCACCAACCCCTTCCATCAATGATGAAGATATTGTCCCGC
TTAAAACTCTGTCTCGCGGTGTTGTTCAAGCCTACCGAGGGGTGGTGGAA
CGCGTTTTGCCTGCCTTTGCTGCCTTGCTGCAACTCGACCATTCGGATGG
ATTATCGGAGGCAGAAACAGAAGCATCGACACAGAGACTCAAGTTGTTGT
GGTTAAACTCGATGAAGAAAAGATTTGGTGTGGACCTGGGGACGATGGTC
ATGTCGGATGCCCCGCCGCCAGCGGAGCAAAGAACGAGGAAAGGGAGGAA
GAAAGGGAGGAGGAAGAAAGGAGGAAAACGAGAAGCAGAAGGAGGATCAG
GAAGAGATAGTGAAGAAGAGAGTAGAAACAATAATAGTGGTGGCAGCAGC
GACGGCAGCAGTAGCAGCGACAGTGGTAGTTCCCTGGAAGAGGAGGGGGA
GGAGAAACAGGAGGAAAGACGGATTCGAGCCATCAAAGCATCGCAGCTTT
CTAGAACCTTTCGGTGGACCAGCCCGCCAAGACCCGCGGGGTCTTCTAGA
CGGGAGAGGATAAGACAAAGACATGATGTGGAGGGGAAGGAGGAGGGGGA
GGAAGGAGATGGAAGAGGGGTGAGGCTGGGCCGTCCTAGAAGCTACATGG
CGCCACCGGGTTTGGGGGCAATAGCTACAGCACGCTCTGCTGCCGCTGCT
GCCACTGCTGCACCCTCTCCCTTACCTTTGTCGGTTCACAAGGGGGAGGG
AGAGAAGGAAGGAGGGCGAGAAGATCGTGCGGGCCAACGGGCCAGGAGAT
GGAGGCAAAAGCAGCACAAGGCAGGGAGCCAGAAGCCGTCCCAGACAATC
ACGAACACAGACACAATACCTCCTGCCACCGACGGGGAACCCTACCTTCC
CCTTGGCAATCCTGCTAGGCAGCAGCAGCAGCAGCAGCGACGACGGCGGA
TCCCATCTCCAGGCGTGATCGGGACAACCTCCCTCCTCGTCCCCAACTCC
CAAACGTCGCCAATGGAATTATCTTCCTCATCCTCTCCTGTCGAAGGTCA
GGGAGGAAAACGCGGAAAAAGGAGTAACACCCTCCTTTGTCCTCCAGTCA
CCAGCGGCAGAAACAGCAGCGATATCAACAGCACGAGCAGGAGTGGAAGC
ACTCCGGCTTTCCCCCACCCTCCTCTTCCTCCTCCTCCAATCTCCCGTCC
TGCTACGAAATCTCTTCGAAGGAAAGCGGGGGAAGTCGGCTACTGCAGCA
GCAGTAGCAGCAGCACCTCGTGGAGGAATGGTGTGACACGCCCCTCTCTT
CCTCCCTTCTTTCCCTCTCCTCTTCTTCCTCCCCTCCCTCATCCTCCTTC
TCTTGAGCAGCAGCAGCAGCAGAAACAGCCACTAGACGTGCAAGCTTTGC
TTCAAGAGGACGAGGACGAGGACGAGGATGAGGAAGCAGCAGGGGCAGCA
CGAGCTGTAGGCGTAGCAGCAGTGGCAGCAGAGATTGATTATTCTGCTTT
ATTGTTGGAGGAGGATGAGAGCGAGGGCGAGGGAGAGGAAGGGAAGGAGG
AAGGGCATGGATGTCATGGAGGGGCGGAGAATCGAGAGAAGCTTGCAATA
GGAGGGAAGGAGGGAGGGAAGGAGGGAGAAAAGGAGGGAGGGTGGAAGGA
GGAGGACGACGATCTTGCCATTCTGATGGCCACTGCCGGAGAGATGGTGG
ATGGGGACAAGGACGAAGAAGAGGAAGAGGAAGAGGATGGCGAGAAAAAG
GAGAGAATGAAAAAGCGGGAAGGAAGAAAGGAGGAGGAGGAGGAGGAGGA
GGAGGCAGAGGATGTGGCAGAAGAGGGAATGGATGACGATTTAGCCTTCC
TCATGGGTTTGGGAGAAATTGGGGATGGTGGAGGGGGAGGAAGGGAAGGA
GGAGAGGAGGGATGGCGTGGGGGGAGAGGGCTTGCATCTCCCTCGCATCG
ATGGCCTCCGGGTGTGGAGAGGGGGGGAGGGGAGGAGGGAGGGAAGGAGG
GAGAGGAGGGTAGGAAGGTACCAGGAATTAGGGGGTTGAAGGTGGATGAT
CTTTCGGAGGTGGCGTTGGAGATGCCGGTGGAAAGGAAGGAGGATGTGAG
GCTGTACGGGATATTGACGAGGCTGGTGAGGAGTGGGAGAGGGGGAAGGG
ACCGAGGGAGGGAGGGAGGGAGGGAGGAGGGATGTTGGGCGGTGCGGTTG
GAAGACTGCTTCTTACTGGCCCCGGGGAGAGAGGTGTTGTTGGAGCGGGT
TGACTTGGTGGTGAAGCATGACTTGGACTAGTGTGGAAGAGAGGGAGGGG
ATGAAGAAAGGAGGGCGTCATCGCGCGATGCTGGGGAGGGAGTGAGGGGA
TAAGGGAGGGAGAAAGCGGTGTACAAAGAAATACAACAAGCAATAAAGGG
AAAGCGGACAAGCGATTGCAATTCGTCAAATAAAGTCATGAAGAAAATCA
CAAAGTAATCAACACTGGATGCACGAGC back to topprotein sequence of NO12G03470.1 >NO12G03470.1-protein ID=NO12G03470.1-protein|Name=NO12G03470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=771bp
MASNSNCPYTAAAAPPTPSINDEDIVPLKTLSRGVVQAYRGVVERVLPAF
AALLQLDHSDGLSEAETEASTQRLKLLWLNSMKKRFGVDLGTMVMSDAPP
PAEQRTRKGRKKGRRKKGGKREAEGGSGRDSEEESRNNNSGGSSDGSSSS
DSGSSLEEEGEEKQEERRIRAIKASQLSRTFRWTSPPRPAGSSRRERIRQ
RHDVEGKEEGEEGDGRGVRLGRPRSYMAPPGLGAIATARSAAAAATAAPS
PLPLSVHKGEGEKEGGREDRAGQRARRWRQKQHKAGSQKPSQTITNTDTI
PPATDGEPYLPLGNPARQQQQQQRRRRIPSPGVIGTTSLLVPNSQTSPME
LSSSSSPVEGQGGKRGKRSNTLLCPPVTSGRNSSDINSTSRSGSTPAFPH
PPLPPPPISRPATKSLRRKAGEVGYCSSSSSSTSWRNGVTRPSLPPFFPS
PLLPPLPHPPSLEQQQQQKQPLDVQALLQEDEDEDEDEEAAGAARAVGVA
AVAAEIDYSALLLEEDESEGEGEEGKEEGHGCHGGAENREKLAIGGKEGG
KEGEKEGGWKEEDDDLAILMATAGEMVDGDKDEEEEEEEDGEKKERMKKR
EGRKEEEEEEEEAEDVAEEGMDDDLAFLMGLGEIGDGGGGGREGGEEGWR
GGRGLASPSHRWPPGVERGGGEEGGKEGEEGRKVPGIRGLKVDDLSEVAL
EMPVERKEDVRLYGILTRLVRSGRGGRDRGREGGREEGCWAVRLEDCFLL
APGREVLLERVDLVVKHDLD* back to top
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