NO12G03240, NO12G03240 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G03240
Unique Name	NO12G03240
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	6151
Alignment location	chr12:896673..902823 +

Link to JBrowse

Properties


Property Name	Value
Description	RNA helicase, ATP-dependent, SK12/DOB1 protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:896673..902823 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding
GO:0016787	hydrolase activity
GO:0003723	RNA binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR025696	rRNA_proc-arch_dom
IPR011545	DEAD/DEAH_box_helicase_dom
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd

Vocabulary: **Biological Process**
Term	Definition
GO:0009056	catabolic process
GO:0006139	nucleobase-containing compound metabolic process

Homology

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BLAST of NO12G03240 vs. NCBI_GenBank
Match: EWM25730.1 (superkiller viralicidic activity 2-like 2 [Nannochloropsis gaditana])

HSP 1 Score: 1081.6 bits (2796), Expect = 0.000e+0
Identity = 582/733 (79.40%), Postives = 606/733 (82.67%), Query Frame = 0

Query:   19 PSVHTLPPTHNHTEVSMDDGDLNDLFGAFDGDDVAETVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVISFSALPADYVAHDFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGXXXXXXXXXXXXXXXXXXXGAGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLPGGGG 752
            P++  + P    + +SMD G+LNDLFGAFDG+DVAETV                                                       G SKR R S+G      KG +PTITQHQEIITPDGRRVISFSALPADY   +F PPA+PAK YAF LDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGG GLYLVVDEKSRFRE+NFQKAMAVLQ EG        XXXXXXXXXXX  GQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALKM KLDFNEEGEKELVEQVF NAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMM+SKMEPD+CK +LYGEPDKLYSSYHVSYNMLLNMLRVQG NPEFLVRSSFHQYQQE+AAPALEKEA  +E  AR V IEGG EGEA  AEY+A  +Q E IKKEMRKYTQDP++VLSFLKKGRL  V EE  EG R    +WGWGAVVGYK VD  K ++    GGG
Sbjct:   55 PAMPIIQPHGAISSLSMDGGELNDLFGAFDGEDVAETVAPIAAPGLTPAKADAKRKGLTNGVKAAGGEMEDNNGDVEEELG-----------AGPSKRSRNSEGT--ALDKGQEPTITQHQEIITPDGRRVISFSALPADYTPSEFTPPARPAKEYAFALDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGEGLYLVVDEKSRFREDNFQKAMAVLQGEG-------GXXXXXXXXXXXXKGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMSKLDFNEEGEKELVEQVFTNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMDSKMEPDVCKAILYGEPDKLYSSYHVSYNMLLNMLRVQGVNPEFLVRSSFHQYQQEAAAPALEKEAESIEAVARGVKIEGGTEGEAAAAEYYACRSQWEEIKKEMRKYTQDPEIVLSFLKKGRLAYVVEETPEGKR----DWGWGAVVGYKVVDGGKVKSKTQEGGG 763

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BLAST of NO12G03240 vs. NCBI_GenBank
Match: CBJ32567.1 (Superkiller viralicidic activity 2-like 2 (ATP-dependent helicase SKIV2L2) conserved hypothetical pr [Ectocarpus siliculosus])

HSP 1 Score: 783.1 bits (2021), Expect = 7.800e-223
Identity = 408/657 (62.10%), Postives = 489/657 (74.43%), Query Frame = 0

Query:  110 KEGRSKRPRKSDGNDPGPSKGVQPTIT----QHQEIITPDGRRVISFSALPADYVAH-DFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGXXXXXXXXXXXXXXXXXXXGAGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVK--------EEGKEGGRE-----------GAKEWGWGAVVGYKAVDVSKA 743
            ++  ++  R    +DP  S  V+ ++     +    +  DG  V S+S  PAD+     + P  +PAK Y F LDPFQ+ AI +IE+ ESVLV+AHTSAGKTV AEYAIA  L+ KQRVIYTSPIKALSNQK+RD+ EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSE+MREVAWVIYDEIHYMRDK+RGVVWEESIILLPHKVRFVFLSATIPNS+EF GWIA  HHQPCHVVYTDYRPVPL+HYIFP GG GL+LVVD K RFRE NFQKAMA LQA                       G+ S+L KIVRL+M+RS DP I+FSF+K+ECE  AL+M KLDFN++ EK LVEQVF NA++SL++ED+ LPQV ++LPLLKRGVGIHHGGLLPILKE+IEILFQEGLIK LFATETFSIG+NMPA+TVVFT   KFDG+DFRW+T GEYIQMSGRAGRRGKDDRGIVI M++ KM+P + K MLYGE D L SSYH+SYNMLLNMLRV+ A+P+FLV+SSF+Q+QQE++APALE+EA++L+  + +  +  G   E   +EYF    QLE  + E+ +  Q P+  L +++ GRLV ++        ++ K  GRE              +WGWGA V       SKA
Sbjct:   40 RQALAQEERAKRDSDPAASAVVEGSVALKEGEESSTVREDGTLVKSYSVYPADWKPDTTYRPAPKPAKEYPFTLDPFQKQAIEYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMRDKNRGVVWEESIILLPHKVRFVFLSATIPNSKEFCGWIAKTHHQPCHVVYTDYRPVPLEHYIFPFGGEGLHLVVDNKGRFRENNFQKAMAKLQATPEEQAVAEGKKTFGAKKQAKKQGEGSDLYKIVRLVMDRSLDPAIVFSFAKKECEGNALQMSKLDFNDDSEKLLVEQVFGNAMESLADEDRQLPQVEAILPLLKRGVGIHHGGLLPILKEVIEILFQEGLIKILFATETFSIGLNMPARTVVFTNTRKFDGQDFRWITSGEYIQMSGRAGRRGKDDRGIVIQMLDEKMDPQVAKGMLYGEADALNSSYHISYNMLLNMLRVEDADPDFLVKSSFNQFQQEASAPALEEEASDLD--SEKKVLAAGLNDEERTSEYFLVRQQLERTRAEVCRVIQRPENCLPYIQAGRLVRMRGWPARHGDQDKKPDGREANGHQAELSFDNQPDWGWGATVDLNKKASSKA 694

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BLAST of NO12G03240 vs. NCBI_GenBank
Match: OQS00492.1 (DEAD/DEAH box RNA helicase [Thraustotheca clavata])

HSP 1 Score: 778.5 bits (2009), Expect = 1.900e-221
Identity = 399/633 (63.03%), Postives = 476/633 (75.20%), Query Frame = 0

Query:  118 RKSDGNDPGPS---------KGVQPTITQHQEIIT-PDGRRVISFSALPADYVAHDFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGXXXXXXXXXXXXXXXXXXXGAGQQSELG----KIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKA 737
            RK D   PGP+         + V PT +      T    + +ISFSALP DYVA +      PAK+Y F LDPFQQ A+ +IEKGESVLV+AHTSAGKT  AEYAIA SL+ KQRVIYTSPIKALSNQKYRD+ +EFGDVGLMTGDITINP+ATCLIMTTEILRSMLYRGSE+MREVAWVIYDEIHYMRDK+RGVVWEESIILLPHKVRFVFLSATIPNS+EFA WI  IHHQPCHVVYTDYRP PLQHY+FP+GG GL+LVVDEK +FRE+NFQKAMA L A                      A  + ++G    +IV+L+MER YDPVIIFSFSKRECEAYAL + KLDFN + EK +V+QVF NAIDSLS++DK+LPQV ++LPLLKRG+GIHHGGLLPILKE+IEI+F EGL+KCLFATETFS+G+NMPAKTVVFT C K+DG DFRW+T GEYIQMSGRAGRR KD RGIVI M++ KMEP + K +LYG+ D L+SS+H+ YNMLLN+LRV+ ANPE++++ SFHQ+Q E AAP  E+    ++E    + I      EAEVAEY+  +  L  +  +MR     P  V+ FL  GRLV V  +      +  K+W +G +V +++
Sbjct:   39 RKPD-ETPGPAAKRIQVQVVQNVDPTFSNEVHCATGTQKKNLISFSALPPDYVAPELPADFVPAKSYPFTLDPFQQQAVDYIEKGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEQEFGDVGLMTGDITINPTATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFASWICHIHHQPCHVVYTDYRPTPLQHYVFPAGGDGLHLVVDEKGKFREDNFQKAMATLSAS---TDTDANELANNKKGGKKSANPKKKIGSDVFRIVKLVMERQYDPVIIFSFSKRECEAYALLLSKLDFNTDEEKTMVDQVFKNAIDSLSDDDKSLPQVDAILPLLKRGIGIHHGGLLPILKEVIEIMFGEGLLKCLFATETFSMGLNMPAKTVVFTNCRKYDGNDFRWITSGEYIQMSGRAGRRSKDARGIVIQMLSDKMEPQVAKGILYGQADPLFSSFHLGYNMLLNLLRVEDANPEYMIKQSFHQFQNEQAAPGHEEALQRVKEEKDAIVI----ANEAEVAEYYYLSKSLTKLSDDMRAIRNQPKFVVPFLNAGRLVKVYSD------DADKKWDYGVIVNFES 657

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BLAST of NO12G03240 vs. NCBI_GenBank
Match: OQR87372.1 (DEAD/DEAH box RNA helicase [Achlya hypogyna])

HSP 1 Score: 770.8 bits (1989), Expect = 4.000e-219
Identity = 393/628 (62.58%), Postives = 470/628 (74.84%), Query Frame = 0

Query:  118 RKSDGNDPGPSKGVQPTITQHQEIITPD---------GRRVISFSALPADYVAHDFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGXXXXXXXXXXXXXXXXXXXGAGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKA 737
            RK++   P P+K +Q  + Q+ +    D          + +ISFSALP DY A        PAK+Y F LDPFQQAA+ +IEKGESVLV+AHTSAGKT  AEYAIA SL+ KQRVIYTSPIKALSNQKYRD+ +EFGDVGLMTGDITINP+ATCLIMTTEILRSMLYRGSE+MREVAWVIYDEIHYMRDK+RGVVWEESIILLPHKVRFVFLSATIPNS+EFA WI  IHHQPCHVVYTDYRP PLQHY+FP+GG GL+LVVDEK +FRE+NFQKAMA L A                          S++ +IV+L+MER YDPVIIFSFSKRECEAYAL + KLDF  + EK +++QVF NAIDSLS++DK+LPQV ++LPLL+RG+GIHHGGLLPILKE+IEI+F EGL+KCLFATETFS+G+NMPAKTVVFT C K+DG DFRW+T GEYIQMSGRAGRR KD RGIVI M++ KMEP + K +LYG+ D L+SS+H+ YNMLLN+LRV+ ANPE++++ SFHQ+Q E AAP LE   A + E    + I      E EVAEY+  +  L     ++R    +P  V+ FL  GRLV V   G          W +G +V +++
Sbjct:   38 RKTEEAAP-PAKRIQVQVVQNVDPAVKDEVHCATGTQKKNLISFSALPPDYEAPTLPEGFVPAKSYPFTLDPFQQAAVDYIEKGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEQEFGDVGLMTGDITINPTATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFASWICHIHHQPCHVVYTDYRPTPLQHYVFPAGGDGLHLVVDEKGKFREDNFQKAMATLSASTEPDETSAKTKGGKKGGANPKKKVGSDVFRIVKLVMERQYDPVIIFSFSKRECEAYALLLSKLDFTSDEEKNMIDQVFKNAIDSLSDDDKSLPQVDAILPLLRRGIGIHHGGLLPILKEVIEIMFGEGLLKCLFATETFSMGLNMPAKTVVFTNCRKYDGNDFRWITSGEYIQMSGRAGRRSKDARGIVIQMLSDKMEPQVAKGILYGQADPLFSSFHLGYNMLLNLLRVEDANPEYMIKQSFHQFQNEQAAPGLEDALARVLEEKAAIEI----PNEPEVAEYYYLSKSLAKYADDLRALRNEPKHVVPFLNAGRLVKVYSAG--------TPWDYGVIVNFES 652

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BLAST of NO12G03240 vs. NCBI_GenBank
Match: OWZ16135.1 (DEAD/DEAH box RNA helicase [Phytophthora megakarya])

HSP 1 Score: 770.4 bits (1988), Expect = 5.200e-219
Identity = 401/645 (62.17%), Postives = 477/645 (73.95%), Query Frame = 0

Query:  111 EGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVISFSALPADYVAHDFMPPA--QPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAE-GXXXXXXXXXXXXXXXXXXXGAGQQSELG----KIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAK-EWGWGAVVGYKAVDVSKARAGLP 748
            EG+       DG+D   + GV  T TQ         + +ISFS  P DY A      A   PAKTY F LDPFQQ A+ +IE GESVLV+AHTSAGKT  AEYAIA SL+ KQRVIYTSPIKALSNQKYRD+ EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSE+MREVAWVIYDEIHYMRDK+RGVVWEESIILLPHKVRFVFLSATIPNS+EFAGWI  IHHQPCHVVYTDYRP PLQHYIFP+GG GL+LVVDEK +FRE+NFQKA+A L A                       +  + ++G    +IV+LIMER YDPVIIFSFSKRECEAYAL M KLDFN E EK+ V+Q+F NA+DSLS++D+ LPQV S+LPLL+RG+GIHHGGLLPILKE+IEILF EGL+KCLFATETFS+G+NMPAKTVVFT C K+DGKDFRW+T GEYIQMSGRAGRR  D RGIVI M++ +MEP + K +LYG+ D L+S++H+ YNMLLN++RV+ A+PE++++ SFHQ+Q E AAPALE+     +E   ++ I    + E EVA+Y+  +  L  +K E       PD V+ FL  GRL  VK    E   +  K +W WG +V +   + S + +  P
Sbjct:   66 EGKRIDATPVDGSDKHSASGVVSTGTQQ--------KNLISFSVYPEDYEAQPTAGAAAKNPAKTYPFTLDPFQQQAVDYIEAGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFAGWICHIHHQPCHVVYTDYRPTPLQHYIFPAGGNGLHLVVDEKGKFREDNFQKAIATLSASVDDAAAELASYGSNTKRRKAQKSNPKKKVGTDVFRIVKLIMERQYDPVIIFSFSKRECEAYALLMSKLDFNTEEEKQSVDQLFKNAMDSLSDDDRALPQVDSILPLLRRGIGIHHGGLLPILKEVIEILFGEGLLKCLFATETFSMGLNMPAKTVVFTNCRKYDGKDFRWITAGEYIQMSGRAGRRSLDARGIVIQMLSEQMEPQVAKGILYGQADPLFSTFHLGYNMLLNLMRVEDADPEYMIKQSFHQFQNEQAAPALEEALERAKEEKDQIVI----KNEEEVAQYYYLSRSLVRLKGEFLAIRNKPDYVVRFLNGGRL--VKLYSSENDDDTVKPKWDWGVIVNFSTKNTSDSTSATP 696

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BLAST of NO12G03240 vs. NCBI_GenBank
Match: XP_009536796.1 (hypothetical protein PHYSODRAFT_528925 [Phytophthora sojae] >EGZ07230.1 hypothetical protein PHYSODRAFT_528925 [Phytophthora sojae])

HSP 1 Score: 769.6 bits (1986), Expect = 8.900e-219
Identity = 403/647 (62.29%), Postives = 479/647 (74.03%), Query Frame = 0

Query:  111 EGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVISFSALPADYVAHDFMPPA-----QPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAE-GXXXXXXXXXXXXXXXXXXXGAGQQSELG----KIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLP 748
            EG+       DG+D G S GV  T TQ         + +ISFS  P DY   +  P A      PAKTY F LDPFQQ A+ +IE GESVLV+AHTSAGKT  AEYAIA SL+ KQRVIYTSPIKALSNQKYRD+ EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDK+RGVVWEESIILLPHKVRFVFLSATIPNS+EFAGWI  IHHQPCHVVYTDYRP PLQHYIFP+GG GL+LVVDEK +FRE+NFQKA+A L A                       +  + ++G    +IV+LIMER YDPVIIFSFSKRECE+YAL M KLDFN E EK+ V+Q+F NA+DSLS++D+ LPQV S+LPLL+RG+GIHHGGLLPILKE+IEILF EGL+KCLFATETFS+G+NMPAKTVVFT C K+DGKDFRW+T GEYIQMSGRAGRR  D RGIVI M++ +MEP + K +LYG+ D L+S++H+ YNMLLN++RV+ A+PE++++ SFHQ+Q E AAPALE+     +E   ++ I    + E EVA+Y+  +  L  +K+E       PD V+ FL  GRLV +     + G    K W WG VV +   + S + +  P
Sbjct:   74 EGKRIDATPVDGSDKG-SGGVVSTGTQQ--------KNLISFSVYPPDY---EMTPTAGAAAENPAKTYPFTLDPFQQQAVDYIEAGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFAGWICHIHHQPCHVVYTDYRPTPLQHYIFPAGGNGLHLVVDEKGKFREDNFQKAIATLSASVDDAAAELASYGSNTKRRKAQKSNPKKKVGTDVFRIVKLIMERQYDPVIIFSFSKRECESYALLMSKLDFNTEEEKQSVDQLFKNAMDSLSDDDRALPQVDSILPLLRRGIGIHHGGLLPILKEVIEILFGEGLLKCLFATETFSMGLNMPAKTVVFTNCRKYDGKDFRWITAGEYIQMSGRAGRRSLDARGIVIQMLSEQMEPQVAKGILYGQADPLFSTFHLGYNMLLNLMRVEDADPEYMIKQSFHQFQNEQAAPALEEALERAKEEKDQIVI----KNEEEVAQYYYLSRSLVRLKEEFLAIRNKPDYVVRFLNGGRLVKLYCPDSDDGTTKPK-WDWGVVVNFTTKNASDSTSATP 703

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BLAST of NO12G03240 vs. NCBI_GenBank
Match: GAX97223.1 (Hypothetical protein PINS_005118 [Pythium insidiosum])

HSP 1 Score: 769.6 bits (1986), Expect = 8.900e-219
Identity = 390/608 (64.14%), Postives = 464/608 (76.32%), Query Frame = 0

Query:  147 RRVISFSALPADYVAHDF--MPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGXXXXXXXXXXXXXXXXXXXGAGQQ-----SELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLP 748
            + +ISFS  P DY   +      A PAKTY F LDPFQQ A+ +IE GESVLV+AHTSAGKT  AEYAIA SL+ KQRVIYTSPIKALSNQKYRD+ EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSE+MREVAWVIYDEIHYMRDK+RGVVWEESIILLPHKVRFVFLSATIPNS+EFA WI  IHHQPCHVVYTDYRP PLQHY+FP+GG GL+LVVDEK +FRE+NFQKA+A L +                       G       S++ +IV+LIMER YDPVI+FSFSKRECEAYAL M KLDFN E EK++VEQVF NAIDSLS++DKTLPQV S+LPLL+RG+GIHHGGLLPILKE+IEI+F EGL+KCLFATETFS+G+NMPAKTVVFT   K+DG  FRW+T GEYIQMSGRAGRR  D+RGIVI M++ +MEP + K +LYG+ D L+S++H+ YNMLLN++RV+ A+PE++++ SFHQ+Q E AAPALE +A E     R+  I    + E+EVAEYF  +  L  +K+E       PD  + FL  GRLV +     +G    AK+W WG +V +   + + + +  P
Sbjct:  391 KNLISFSVYPPDYEVQNVEGRSKANPAKTYPFTLDPFQQQAVDYIEAGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFAAWICHIHHQPCHVVYTDYRPTPLQHYVFPAGGNGLHLVVDEKGKFREDNFQKAIATLTSSATNDSEDLASYGSANKKKKAKGGNPKRKVGSDVYRIVKLIMERQYDPVIVFSFSKRECEAYALLMSKLDFNTEEEKQMVEQVFKNAIDSLSDDDKTLPQVDSILPLLRRGIGIHHGGLLPILKEVIEIMFGEGLLKCLFATETFSMGLNMPAKTVVFTNARKYDGNAFRWITSGEYIQMSGRAGRRSVDNRGIVIQMLSEQMEPQVAKGILYGQADPLFSAFHLGYNMLLNLMRVEDADPEYMIKQSFHQFQNEQAAPALE-DALERTRQERDQII---VKNESEVAEYFYLSKSLVNLKEEFLAVRNKPDHAVRFLNAGRLVKLYVRPDDG---NAKKWDWGVIVNFTTKNAADSTSPTP 991

[Close]

BLAST of NO12G03240 vs. NCBI_GenBank
Match: XP_012208984.1 (hypothetical protein SPRG_14450 [Saprolegnia parasitica CBS 223.65] >KDO20315.1 hypothetical protein SPRG_14450 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 767.3 bits (1980), Expect = 4.400e-218
Identity = 385/594 (64.81%), Postives = 457/594 (76.94%), Query Frame = 0

Query:  147 RRVISFSALPADYVAHDFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGXXXXXXXXXXXXXXXXXXXGAGQQSELG----KIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKA 737
            + +ISFSALP DYVA        PAKTY F LDPFQQ ++ +IEKGESVLV+AHTSAGKT  AEYAIA SL+ KQRVIYTSPIKALSNQKYRD+ +EFGDVGLMTGDITINP+ATCLIMTTEILRSMLYRGSE+MREVAWVIYDEIHYMRDK+RGVVWEESIILLPHKVRFVFLSATIPNS+EFA WI  IHHQPCHVVYTDYRP PLQHY+FP+GG GL+LVVDEK +FRE+NFQKAMA L A                     G   + ++G    +IV+L+MER YDPVIIFSFSKRECEAYAL + KLDF  + EK +V+QVF NAIDSLS++DK+LPQV S+LPLL+RG+GIHHGGLLPILKE+IEI+F EGL+KCLFATETFS+G+NMPAKTVVFT C K+DG DFRW+T GEYIQMSGRAGRR KD RGIVI M++ KMEP + K +LYG+ D L+SS+H+ YNMLLN+LRV+ ANPE++++ SFHQ+Q E AAP LE   A + E    + I      E EVAEY+  +  +     ++R    +P  ++ FL  GRLV V           +  W +G +V +++
Sbjct:   67 KNLISFSALPPDYVAPTLPDDFVPAKTYPFTLDPFQQQSVDYIEKGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEQEFGDVGLMTGDITINPTATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFASWICHIHHQPCHVVYTDYRPTPLQHYVFPAGGDGLHLVVDEKGKFREDNFQKAMATLSAS--MEPEPADQSAAKKGAKKTGGNPKKKIGADVFRIVKLVMERQYDPVIIFSFSKRECEAYALLLSKLDFTTDEEKTMVDQVFKNAIDSLSDDDKSLPQVDSILPLLRRGIGIHHGGLLPILKEVIEIMFGEGLLKCLFATETFSMGLNMPAKTVVFTNCRKYDGNDFRWITSGEYIQMSGRAGRRSKDARGIVIQMLSDKMEPQVAKGILYGQADPLFSSFHLGYNMLLNLLRVEDANPEYMIKQSFHQFQNEQAAPGLEDALARVLEEKDAIEI----PNEPEVAEYYYLSKSVAKYADDLRAIRNEPKYIVPFLNAGRLVKV--------HSTSAPWDYGVIVNFES 646

[Close]

BLAST of NO12G03240 vs. NCBI_GenBank
Match: XP_002903063.1 (DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4] >EEY56233.1 DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 766.9 bits (1979), Expect = 5.800e-218
Identity = 398/644 (61.80%), Postives = 472/644 (73.29%), Query Frame = 0

Query:  111 EGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVISFSALPADYVAHDFMPPA--QPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGXXXXXXXXXXXXXXXXXXXGAGQQ-----SELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLP 748
            EG+       +GND   S  V  T TQ         + +ISFS  P DY A      A   PAKTY F LDPFQQ A+ +IE GESVLV+AHTSAGKT  AEYAIA SL+ KQRVIYTSPIKALSNQKYRD+ EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSE+MREVAWVIYDEIHYMRDK+RGVVWEESIILLPHKVRFVFLSATIPNS+EFAGWI  IHHQPCHVVYTDYRP PLQHY+FP+GG GL+LVVDEK +FRE+NFQKA+A L A                               +++ +IV+LIMER YDPVIIFSFSKRECEAYAL M KLDFN E EK+ V+Q+F NA+DSLS++D+ LPQV S+LPLL+RG+GIHHGGLLPILKE+IEILF EGL+KCLFATETFS+G+NMPAKTVVFT C K+DGKDFRW+T GEYIQMSGRAGRR  D RGIVI M++ +MEP + K +LYG+ D L+S++H+ YNMLLN++RV+ A+PE++++ SFHQ+Q E AAPALE+     +E   ++ I    + E EVA+Y+  +  L  +K+E       PD V  FL  GRLV +     + G    K W WG +V +   + S +    P
Sbjct:   69 EGKRIDATPIEGNDK-HSANVVSTGTQQ--------KNLISFSVYPPDYDAQPTAGAAAKNPAKTYPFTLDPFQQQAVDYIESGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFAGWICHIHHQPCHVVYTDYRPTPLQHYLFPAGGSGLHLVVDEKGKFREDNFQKAIATLSASTDDAAAELASYGSNTKRRKAQKSNPKKKVGTDVFRIVKLIMERQYDPVIIFSFSKRECEAYALLMSKLDFNTEEEKQSVDQLFKNAMDSLSDDDRALPQVDSILPLLRRGIGIHHGGLLPILKEVIEILFGEGLLKCLFATETFSMGLNMPAKTVVFTNCRKYDGKDFRWITAGEYIQMSGRAGRRSLDARGIVIQMLSEQMEPQVAKGILYGQADPLFSTFHLGYNMLLNLMRVEDADPEYMIKQSFHQFQNEQAAPALEEALERAKEEKDQIVI----KNEEEVAQYYYLSRSLVRLKEEFLAIRNKPDHVTRFLNGGRLVKLYSPDSDDGTSKPK-WDWGVIVNFTTKNASDSTCATP 698

[Close]

BLAST of NO12G03240 vs. NCBI_GenBank
Match: XP_008898285.1 (hypothetical protein PPTG_06148 [Phytophthora parasitica INRA-310] >ETN15871.1 hypothetical protein PPTG_06148 [Phytophthora parasitica INRA-310])

HSP 1 Score: 766.1 bits (1977), Expect = 9.900e-218
Identity = 398/644 (61.80%), Postives = 472/644 (73.29%), Query Frame = 0

Query:  111 EGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVISFSALPADYVAHDFMPPA--QPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGXXXXXXXXXXXXXXXXXXXGAGQQ-----SELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLP 748
            EG+       D ND   S  V  T TQ         + +ISFS  P DY A      A   PAKTY F LDPFQQ A+ +IE GESVLV+AHTSAGKT  AEYAIA SL+ KQRVIYTSPIKALSNQKYRD+ EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSE+MREVAWVIYDEIHYMRDK+RGVVWEESIILLPHKVRFVFLSATIPNS+EFAGWI  IHHQPCHVVYTDYRP PLQHYIFP+GG GL+LVVDEK +FRE+NFQKA+A L A                               +++ +IV+LIMER YDPVIIFSFSKRECEAYAL M KLDFN E EK+ V+Q+F NA+DSLS++D+ LPQV S+LPLL+RG+GIHHGGLLPILKE+IEILF EGL+KCLFATETFS+G+NMPAKTVVFT C K+DGKDFRW+T GEYIQMSGRAGRR  D RGIVI M++ +MEP + K +LYG+ D L+S++H+ YNMLLN++RV+ A+PE++++ SFHQ+Q E AAP LE+     +E   ++ I    + E EVA+Y+  +  L  +K+E       PD V+ FL  GRLV +     + G    K W WG +V +   + S + +  P
Sbjct:   69 EGKRIDATPVDSNDK-HSANVVSTGTQQ--------KNLISFSVYPPDYEAKSTAGAAAKNPAKTYPFTLDPFQQQAVDYIESGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFAGWICHIHHQPCHVVYTDYRPTPLQHYIFPAGGNGLHLVVDEKGKFREDNFQKAIATLSASADDAAQELASYGSNTKRRKAQKSNPKKKIGTDVFRIVKLIMERQYDPVIIFSFSKRECEAYALLMSKLDFNTEEEKQSVDQLFKNAMDSLSDDDRALPQVDSILPLLRRGIGIHHGGLLPILKEVIEILFGEGLLKCLFATETFSMGLNMPAKTVVFTNCRKYDGKDFRWITAGEYIQMSGRAGRRSLDARGIVIQMLSEQMEPQVAKGILYGQADPLFSTFHLGYNMLLNLMRVEDADPEYMIKQSFHQFQNEQAAPVLEEALERAKEEKDQIVI----KNEEEVAQYYYLSRSLVRLKEEFLAIRNKPDYVVRFLNGGRLVKLYCPDSDDGTTRPK-WDWGVIVNFTTKNASDSTSATP 698

The following BLAST results are available for this feature:

BLAST of NO12G03240 vs. NCBI_GenBank

BLAST of NO12G03240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM25730.1	0.000e+0	79.40	superkiller viralicidic activity 2-like 2 [Nannoch...	[more]
CBJ32567.1	7.800e-223	62.10	Superkiller viralicidic activity 2-like 2 (ATP-dep...	[more]
OQS00492.1	1.900e-221	63.03	DEAD/DEAH box RNA helicase [Thraustotheca clavata]	[more]
OQR87372.1	4.000e-219	62.58	DEAD/DEAH box RNA helicase [Achlya hypogyna]	[more]
OWZ16135.1	5.200e-219	62.17	DEAD/DEAH box RNA helicase [Phytophthora megakarya...	[more]
XP_009536796.1	8.900e-219	62.29	hypothetical protein PHYSODRAFT_528925 [Phytophtho...	[more]
GAX97223.1	8.900e-219	64.14	Hypothetical protein PINS_005118 [Pythium insidios...	[more]
XP_012208984.1	4.400e-218	64.81	hypothetical protein SPRG_14450 [Saprolegnia paras...	[more]
XP_002903063.1	5.800e-218	61.80	DEAD/DEAH box RNA helicase, putative [Phytophthora...	[more]
XP_008898285.1	9.900e-218	61.80	hypothetical protein PPTG_06148 [Phytophthora para...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL125	nonsL125	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL124	nonsL124	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR015	ncniR015	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR014	ncniR014	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR010	ngnoR010	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR007	ngnoR007	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR006	ngnoR006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK010259	NSK010259	Nannochloropsis salina (N. salina CCMP1776)	gene

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|625728	gene_5501	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO12G03240.1	NO12G03240.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO12G03240.2	NO12G03240.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO12G03240.3	NO12G03240.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO12G03240.1	NO12G03240.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO12G03240.2	NO12G03240.2	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO12G03240.3	NO12G03240.3	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence
protein sequence
protein sequence

gene sequence

>NO12G03240 ID=NO12G03240|Name=NO12G03240|organism=Nannochloropsis oceanica|type=gene|length=6151bp
GGGCCATCTTCAGACTCATGAGAGCACCGCTTGTGGTGGCTTCTTCGAAC
CCTCACCATATATCCTTTAACAACGCGCATACTGCATAGGCATGCCATCG
ACACAGAACATATCCCAACATGAGGACATGGAGCGTGGGACGGCTCAGGG
CGCAATGTCACAGGCACTCCCACCGTCGCAAGGGCACCTTTTGCCTGTGT
CCTCTCTGCAAGCCTCCATGCCTCCAGGGGAGACTGATGAATGCACGTGG
GCGTGCTTTGTGTAAGTGCTTGCCCCGAGAGGAGAATATTCTACACTCTT
TTTCCGTATGAACTTTTATAGTGTTGTGAGTCTCACTAGCTATGAGGGTT
GCGACGTGGAGGGGGCCACGTTGCGGCACGAAGGGTAGAGCTATTCGAGA
GCGGAGCGAGGGTGATAGGCCGTCAAACATTTTCTCACTGTGTCGTGCAC
GCTTTTTTTGCTCTAGGATCTGTCATATTTTGTATGTAAACCGCCCGTTG
TGTATCCTCCGTCTTTCGCTTCACAATACTTATGAGGCATCGCGGCTTGT
GAGTGTGAAATTATGAAACACCAGAGGTCCCGTGCAGGTGGGTAGACGGA
CCCGTCTCCATGGATAACTATATTTGAGTGATTTGAGATGCCTGTCTTTG
GCCTCGATGCGTGGAGTTTCGATATATTGCTGCTTTCATCGAAATCTACC
TTGTCACTCAAAATGGTGGCATCGACGTTCTCCCCCCTCCCTTCCTTTCC
CCCTCCAAACCCCCTTCAATCACAACTACAGAGAGGAATTCATTTGATAC
GCTCGTAACATTGCTCCGGTCCTGTTGGTCAGTGCCATCCTCATTCTCAT
AATCTATTTTGCAATTGTGCACCCCCGAAAGACATAATCTCCCCCTCTCC
GACCCTCCTTCTCTTCCGCTTGTTTCTCAAAATGACGCCCGCGAGACATT
CCCGGAAAGCCCTCTAAATCTGTGTCCACAGCAGAAGGGACCGGGCCGGA
CTGACAGGCAGCAGCATTGAGGCAGGATGGTGGCGTCGGGCAAAGAACTC
CGAAAGGAGAAACAAGGAGGCATGTACATATGGAAAGGTTGAAAGTATAG
AGAAAAAAAGGATTTATTGGAATCTAGATGAAAATCCTCTAGATCTAAAG
AGAGGAATATAATAACAAGTTCTCGTTCGCTCTTTCACCCACTGATCCTT
TTTCCAGTCTTCTTTCGTTTCTTCCTTCTTTAACGCCTTCAAAAAATGCA
CAAGCAGATCAATCATCTACGGCGATGGTTACGATATCCCTCTCCTCCTT
CTCCTCCTCTTTTCTTGCCCATCGTCCCCTCCTTCGGCCCTACTTCCTCA
CTCCCCTCTCCCGCCCCGACCCCCAATCCAACGCCTTCAGGGCCGCCTTC
AACGGCGCCGGCAACGTCTCGTCCTCCTCCTCTCCCTCCATCCCCTCCTC
CCCCACACCCTTGCCTTGAAACACGTACGCGTATCCATAACTCGCTCCAG
TGGCCACTGCATTGGCCCACCAGATGGTGGGCATGTCCTTCGTTAGGAAA
GGCATCCCCAAGCTCACGATCGGGGTTAGCAAAAACGCCACATCTAAAGC
CTTCTTCTCAGTCTGTCCCGGCTTTCGTGCTCTTAATGACGGAATGGTAA
ACATCCAGAAGCTCCAAAACGCGAACGCTCGGACGGGTAACGGTAAGTGG
TCGAATCCCGGCAGTGCATCATATACTACCACTCCTGACAAGGCGACAGC
TCCCAGGGACTGCCCCAAGAACAGATTTTTCAACCACCCACGCATAACCA
GTCGTTTTTCTGTGGCAAGTTGTGTCTCCTTCTTCTGGATTTGCTTTTCG
AGCGTCGCGAGGGCCTTGTTGTCGTCGGTGGTATCGCGCTCGTTCCGCAA
ATTGATCAAATCAAACTCCAGATTAACGACCTTTGAAGGGTTTAGAAGCT
GGTCGAGCTCCACGCCCGTCTCACGCAAGACCTCGTCGCGGATACGTTGC
ACCATTGGATCATCTTCCGAGATGCCCTTACGCTCTTGTTGTTGTTCCCG
TTCCGTGACAGCTGTACGGGTCGCGACAGGTCTTCTAATGCTACTAGTGA
TGCCGATGGCCTGGCTGGAAGCGGGCGAAGGCAGAAGGAACGCATGTGTG
CTTGCGAGCAACAGGGAAGAGACGAGGATCAGGGCGGCGTTGAGCGCCGC
ATGTCTGGCCGTCATGATAAGATGTAGGGGGCTTGAGGTGGGGCACGCGG
GCTTCGACCTAGCCTGACTAAGCGATGCTGTGTAGGTTGAGGGGAGACAA
GCAGTTAGAAAGGAGACCAGGGCAGGCTTCAGGATTGTTAAACAGGGTTG
TACGCAAGTCATCTTGGTGCCTGTATGAGGGGAATGGGTTCTTACTCCTT
TCCCATTCACAAAGAGTCAGATCACGACCGTGGCGGGACTAGGCGGGACT
AGTATATTCCCCGAGTCCTCATCCATTCGCTGGAGGTGGTCCCTATCCTC
GCATCAGTAGCATCACAAAGAGTAGAAGGGGGTGTGGAAAAAATCGTGCG
TCAATAGCATTAAAGTCGCAGTGACTTAATTCGACTTATTTCTTATTTCT
GTGGAGTGCACCCTCGGGAGGGCTTTTTTGATATGCTGTCCCCTCCCGAC
CTCCCCACCCAAAGACGTTGCCCTGCCCCTTACCATCCGTCTGTCCACAC
CTTACCCCCTACACACAACCACACAGAGGTAAGCATGGATGATGGCGATT
TGAACGACCTGTTTGGGGCTTTTGACGGGGACGACGTGGCTGAGACCGTG
GAACCGATCGCGCCCCCGCCCATCTCTCCTGCTTCTCCCACTGCTACCAA
GCGCAAGTCCATCTCAACAAGTGAAGTTGCGGTGGCCGCCAGAGAAGGAA
ATGGCAACCGCAACAATGATGAAGGCTACAATGAGAACGAGGAGGATGAC
GAGGCAGGCAAGGAGGGACGGAGCAAGCGTCCGCGCAAGTCCGATGGCAA
CGACCCTGGTCCCTCAAAGGGTGTGCAACCCACCATCACCCAACACCAAG
AAATCATCACTCCCGACGGCCGGCGCGTCATTTCCTTCTCGGCCCTCCCC
GCCGATTACGTCGCCCACGATTTTATGCCACCCGCGCAGCCTGCCAAGAC
ATATGCCTTTCCCCTCGACCCATTCCAACAAGCCGCCATTGGCTTCATTG
AAAAGGGCGAGTCCGTCCTCGTTGCTGCACACACTTCCGCAGGCAAGACT
GTCACGGCCGAGTACGCCATTGCCATGAGCCTGCAGAAGAAACAACGGGT
GATTTATACGTCGCCAATCAAGGCGTTATCGAATCAGAAGTACCGAGACA
TGGCCGAGGAGTTTGGGGATGTAGGCTTGATGACGgtacgtgcgtttaag
tgcgagaagccccccttcatctcacactgtgcgtttagggggggtaagat
acatatggttttctatatcggcttatctgcgaagcgtgcttcgtatttta
tacccttaccaccctcttggacgaggagagaaccctgtgctcatgccctc
cctccttcgctccctccctccctcttcgcacagGGCGACATCACCATTAA
CCCTTCCGCGACCTGCCTCATCATGACCACTGAAATTCTCCGCTCGATGC
TTTACCGCGGGAGTGAGATCATGCGAGAGGTGGCTTGGGTGATTTACGAT
GAGATTCACTACATGCGGGACAAGGACCGGGGAGTGGTGTGGGAGgtatg
ttctctctaccctaccgcctcccctcccctccctcccgccgaatgaagac
tgagtccttcccccttccttcctgccctccctccctcccttctccacctc
cagGAAAGCATCATCCTCCTCCCCCACAAGGTACGCTTCGTTTTTCTCTC
GGCCACCATCCCCAACAGCCAAGAATTCGCAGGCTGGATCGCCACCATCC
ACCACCAGCCCTGTCACGTCGTTTACACCGATTACCGGCCCGTGCCCTTG
CAGCATTACATCTTTCCTTCAGGAGGGGTGGGGTTGTACCTGGTCGTGGA
CGAGAAGAGTCGGTTCCGAGAGGAAAATTTCCAAAAGGCCATGGCGGTGT
TGCAGGCAGAGGGAGGGGAGGAAGAAGGGGCAAGCAAGAAAAAGAGTGGG
GGGGGTAGGGAGGGAGGGAAGGGAGCGGGGCAGCAGAGCGAATTGGGGAA
GATCGTGCGATTGATTATGGAGAGGTCTTATGACCCTGTGATTATTTTTT
CCTTCTCTAAGAGGGAGTGTGAGGCGTATGCCCTCAAGATGGGGAAGCTG
GATTTCAACGAGGAGGGGGAGAAAGAGCTCGTGGAGCAGgtagggagcga
gggacggagggagggaaaatgtatgtcacacgggaactttcgagaaacga
ttgtgagatatgcgcgatgaagattgagaaggcacgccgactgtcatgaa
gagagggggaaacgcctgccggggcatttaagagtatcttttacatacct
tctttctctctcatgttaacgtttttcttcctcactgcgaccgtccttcc
cttcctccctccctccctccctccccaagGTGTTTAACAACGCCATCGAC
TCCCTCTCGGAGGAGGACAAGACCCTCCCTCAAGTCGTCTCCCTCCTCCC
CCTCCTCAAGCGTGGCGTCGGCATCCATCACGGTGGCCTCCTTCCCATTC
TTAAGGAAATTATCGAAATCCTCTTCCAGGAAGGATTAATTAAGTGTTTG
TTTGCCACCGAGACCTTCTCCATTGgtacgtatccccccttcttccctcc
ctccctccctcccttcctccctccctccctcccttcctttactcaagcag
ggcgcctgcatagtttctgatgataacatcataacaccctaaagaatcat
aagcgtgaaacccgaaagacctaaaaatacaaaataatgacacaattcaa
taaacagccaataacattaccgaccaatcaatcaacaaacaaaaatgcgc
gaaatatttgaaaaagttgaaaatgaattaattgacacacgattcctttt
ccttctctttctgcagGTATCAACATGCCTGCCAAGACCGTTGTCTTCAC
CCAATGCACCAAATTCGACGGCAAGGACTTCCGGTGGGTCACCCCAGGGG
AATACATCCAGATGAGCGGTCGAGCCGGGCGACGAGGGAAGGACGACAGG
GGGATTGTGATCATGATGATGAACAGCAAGATGGAGCCTGACATCTGTAA
GACCATGCTCTATGGAGgtacgttctagtctacactccctccctattcac
tgtaattatttaaatgtattatttattctatttcttattcatcaaagttc
atcgattagtttcgtttctatggtttttgagtgatgaaacccaatgctgg
caccaatctgagtgcatcgcctcattcggtgcccgattatgaacagctac
tcggctcctaccgcaattgtgagtctctgacaacgaccaacacatctaca
aatattttcaaaacgagtaaatttcttacctttctcaatgctacacagag
tatccacctatgtttttaatcgttcatttatacattcttccacatttttg
tttgaatgcatgtatccatgtatatacatcgattcatatgtacatttatc
tattacgcatcccccaacacagAACCGGACAAGCTCTACTCCTCCTATCA
CGTGTCCTACAACATGCTCCTTAATATGCTCAGGGTTCAAGGCGCCAACC
CCGAGTTCCTCGTCCGTTCGTCTTTTCACCAGTACCAACAGGAGTCTGCA
GCCCCCGCCCTCGAAAAAGAAGCAGCAGAGTTAGAAGAGGCTGCGAGGGA
GGTCACGATCGAGGGAGGGAAGGAGGGCGAGGCGGAAGTCGCTGAATATT
TTGCGTGGAATAATCAGTTGGAGGGAATCAAGAAGGAGATGAGAAAATAC
ACTCAGGATCCCGATGTCGTCTTGTCCTTTTTGAAGAAGGGAAGGTTGGT
CTGTGTGAAGGAGGAGGGGAAGGAAGGAGGGAGGGAGGGAGCGAAGGAGT
GGGGGTGGGGAGCTGTAGTAGGGTATAAGGCCGTAGATGTGAGCAAGGCC
AGGGCGGGCTTGCCGGGGGGGGGGGGGCGGTGGTGGGTGCAGGGAAGGTA
G

protein sequence of NO12G03240.1

>NO12G03240.1-protein ID=NO12G03240.1-protein|Name=NO12G03240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=759bp
MLSPPDLPTQRRCPAPYHPSVHTLPPTHNHTEVSMDDGDLNDLFGAFDGD
DVAETVEPIAPPPISPASPTATKRKSISTSEVAVAAREGNGNRNNDEGYN
ENEEDDEAGKEGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVI
SFSALPADYVAHDFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAH
TSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLM
TGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDR
GVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYR
PVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGGEEEGASK
KKSGGGREGGKGAGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALK
MGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIH
HGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFD
GKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGE
PDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEA
AELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVL
SFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLPGGG
GRWWVQGR*

protein sequence of NO12G03240.2

>NO12G03240.2-protein ID=NO12G03240.2-protein|Name=NO12G03240.2|organism=Nannochloropsis oceanica|type=polypeptide|length=759bp
MLSPPDLPTQRRCPAPYHPSVHTLPPTHNHTEVSMDDGDLNDLFGAFDGD
DVAETVEPIAPPPISPASPTATKRKSISTSEVAVAAREGNGNRNNDEGYN
ENEEDDEAGKEGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVI
SFSALPADYVAHDFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAH
TSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLM
TGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDR
GVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYR
PVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGGEEEGASK
KKSGGGREGGKGAGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALK
MGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIH
HGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFD
GKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGE
PDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEA
AELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVL
SFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLPGGG
GRWWVQGR*

protein sequence of NO12G03240.3

>NO12G03240.3-protein ID=NO12G03240.3-protein|Name=NO12G03240.3|organism=Nannochloropsis oceanica|type=polypeptide|length=759bp
MLSPPDLPTQRRCPAPYHPSVHTLPPTHNHTEVSMDDGDLNDLFGAFDGD
DVAETVEPIAPPPISPASPTATKRKSISTSEVAVAAREGNGNRNNDEGYN
ENEEDDEAGKEGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVI
SFSALPADYVAHDFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAH
TSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLM
TGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDR
GVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYR
PVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGGEEEGASK
KKSGGGREGGKGAGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALK
MGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIH
HGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFD
GKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGE
PDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEA
AELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVL
SFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLPGGG
GRWWVQGR*

Synonyms

Publications