NO12G02660, NO12G02660 (gene) Nannochloropsis oceanica

Overview
NameNO12G02660
Unique NameNO12G02660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1188
Alignment locationchr12:747682..748869 -

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Properties
Property NameValue
DescriptionGuanine nucleotide-binding protein subunit beta
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:747682..748869 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
BLAST of NO12G02660 vs. NCBI_GenBank
Match: EWM25771.1 (guanine nucleotide-binding protein subunit beta [Nannochloropsis gaditana])

HSP 1 Score: 416.0 bits (1068), Expect = 1.300e-112
Identity = 218/395 (55.19%), Postives = 262/395 (66.33%), Query Frame = 0
Query:    5 KPSPEPRILRGHEASVQAVSFL----GSSGSSNDGEPPLLVTGDADGHVKLWDLGACRPRISWMPQQYSAPSLCMAPPTLSSMKGVLSLHALEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSVGGNVSATASATPQQHHQQRLLLAPTAESEQFQLWDMRDGTRPAHTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPPTIPPP 396
            KP PEP ILRGHEA VQA++FL    G++      +  LL +GDADGHVKLWD+GACRP +SW+P + +A  +  A P+ ++MKGVLSLHA  QGR LLTQ+RGGT+SLWD+G+ GG P+ +RSWATGSFHFCKVSVG        A P Q     LLLAPT ESEQFQLWDMR+G+RP  +F P  P+NRGL                                V+EDGSL GWDLR   T+                AAFSVKL +KETP+ LD+ PS  RGILGAAG +LV F L+LA H C   + ++LKHPGVG V +R DE L+A GGWDHRVRIFRWQDGAPLAVLRGH  +VN+L FS  + TLVS GKDAR+A WE ++PP +PPP
Sbjct:    8 KPPPEPFILRGHEAGVQALAFLCENHGTTSERGSDDFSLLASGDADGHVKLWDMGACRPCMSWIPAR-AAAQVTSASPSPATMKGVLSLHAFNQGRSLLTQVRGGTVSLWDLGKCGGTPQSLRSWATGSFHFCKVSVG----EVGGADPTQ-----LLLAPTVESEQFQLWDMREGSRPVISFTPPGPQNRGL------CMCLKLLLSGTRGAEDSNAGVGHALAVFEDGSLHGWDLRMLATN----DRDSFKYGTGDVAAFSVKLAQKETPLCLDVAPSRRRGILGAAGADLVTFALDLALHHCQVKQCIALKHPGVGDVKIREDEGLWAVGGWDHRVRIFRWQDGAPLAVLRGHGATVNALTFSPGLKTLVSGGKDARIALWENVFPP-LPPP 381          
BLAST of NO12G02660 vs. NCBI_GenBank
Match: XP_020244973.1 (protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X1 [Asparagus officinalis] >ONK57830.1 uncharacterized protein A4U43_C09F4610 [Asparagus officinalis])

HSP 1 Score: 158.7 bits (400), Expect = 3.800e-35
Identity = 118/424 (27.83%), Postives = 182/424 (42.92%), Query Frame = 0
Query:    1 MPKPKPSPEP-RILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVKLWDLGACRPRISWMPQQYSAPSLCMAPPTLSSMKGVLSLHALEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSV----------------------------GGNVSATASATPQQHHQQRLLLAPTAESEQFQLWDMRDGTRPA---HTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPPTI 393
            M   +P P+P  +LRGH ASV    F  S         PLL TG ADG +++WD             Q+   S   A    S +  V +  ++  G ++++Q R GT  LW++ E G   +P+ ++ T ++HFCK+S+                             GN S T       + +Q +++    +S Q ++WD+    +          S  + RG+                                 YEDGS+  WD+R+                       S      E  +++ I    + GI GAA  +LV+F L      CT  K ++L+ PG+ +  VR+D K+ AT GWDHRVRI+ ++ G  LAVL+ HS S N+++F+ D   + S  +D +VA WE LYPP I
Sbjct:    1 MSAKRPPPDPIAVLRGHRASVMDACFHSSR--------PLLFTGAADGELRVWD-----------TVQHRTLSSTWAHGGASGVYSVATNSSI--GDRVVSQGRDGTCKLWEVEESGLSRKPLLAFRTSAYHFCKLSLVKNPTVEVEKPEKDIDSEERGTLVSDGGSGNTSTTPIGGTFTNARQNIMVLAGEDSSQVEVWDLSVAKKLVCFPQCNVGSSAKQRGMCMAVQAFLPSESQGFLNILTG------------YEDGSMLWWDIRK------------------TEVPVSSVNYHSEAVLSISIDGQCSGGISGAADNKLVMFTLNHQTGSCTIKKEITLERPGIASTSVRADNKIAATAGWDHRVRIYNYRKGNALAVLKYHSASCNAVSFTPDCKLMASCSEDTKVALWE-LYPPRI 372          
BLAST of NO12G02660 vs. NCBI_GenBank
Match: OMO87475.1 (hypothetical protein CCACVL1_09016 [Corchorus capsularis])

HSP 1 Score: 156.0 bits (393), Expect = 2.400e-34
Identity = 123/425 (28.94%), Postives = 185/425 (43.53%), Query Frame = 0
Query:    5 KPSPEP-RILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVKLWDLGACRPRIS-WMPQQYSAPSLCMAPPTLSSMKGVLSLHALEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSVGGNVSATASATPQQHH---------------------QQRLLLAPTAE----------------SEQFQLWDMRDGTRPAHTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPP 391
            +P P+P  +LRGH ASV    F  S+        PLL TG +DG +++WD    R   S W+   +SA    +A    SS+ G           ++++Q R GT+  WD+ E G    P+ +  T ++HFCK+S+   V    S   + +H                     Q ++  + T E                S +  +WD+  G R A       P++  +                                 YEDGS+  WD+R   T  T                 SVK    E  ++L I  S N GI GAA  +++L++L+     C   K +SL+ PG+ +  +R D K+ AT GWDHRVRI+ ++ G PLA+L+ H  + NS++FS+D   + S  +D  VA WE LYPP
Sbjct:    7 RPPPDPVAVLRGHRASVTGACFHPST--------PLLFTGSSDGELRIWDTIQHRTVSSAWV---HSAAHGIIA-VAFSSLLGT---------NKVISQGRDGTVKCWDIEEGGLSREPLLTIRTNAYHFCKLSL---VKKPISNVQKAYHEVQGKETVGIESSNDIRGKTAQDQVEDSNTVEETCDGGLNYVAMAGEQSSEVDIWDLNTGERSARL-----PQDNFVGSSSFSTKQRGMCMSVQSFLQPGSQGFLNVLAGYEDGSILWWDIRNPGTPVT-----------------SVKF-HSEPVLSLCIDGSCNGGISGAADDKIILYNLDHPMGSCVVKKEISLERPGISSTSIRPDCKIAATAGWDHRVRIYNYRKGNPLAILKYHHATCNSVSFSTDCKLMASASEDTTVALWE-LYPP 383          
BLAST of NO12G02660 vs. NCBI_GenBank
Match: OMO75319.1 (hypothetical protein COLO4_26188 [Corchorus olitorius])

HSP 1 Score: 155.6 bits (392), Expect = 3.200e-34
Identity = 122/428 (28.50%), Postives = 186/428 (43.46%), Query Frame = 0
Query:    5 KPSPEP-RILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVKLWDLGACRPRISWMPQQYSAPSLCMAPPTLSSMKGVLSL--HALEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVS---------------------VG-GNVSATASATPQQHHQ-----QRLLLAPTA------------ESEQFQLWDMRDGTRPAHTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPP 391
            +P P+P  +LRGH ASV    F  S+        PLL TG +DG +++WD            Q  +  S  +     S+  G++++   +L    + ++Q R GT+  WD+ E G    P+ +  T ++HFCK+S                     VG  N + T   T Q   +     +  LL  T             +S + ++WD+  G R A       P++  +                                 YEDGS+  WD+R      T                 SVK    E  ++L I  S N GI GAA  +++L++L+     C   K +SL+ PG+ +  +R D K+ AT GWDHRVRI+ ++ G PLA+L+ H  + NS++FS+D   + S  +DA VA WE LYPP
Sbjct:    7 RPPPDPVAVLRGHRASVTDACFHPST--------PLLFTGSSDGELRIWD----------TIQHRTVSSAWLFSLVHSAAHGIIAVACSSLLGTNKFISQGRDGTVKCWDIEEGGLSREPLLTIRTNAYHFCKLSLVKKPISNVQKANHEVQGKETVGIKNSNDTRGKTAQNQVEDSNTVEGGLLEETCDGGLNYVAMAGEQSSEVEIWDLNTGERSARL-----PQDNFVGSSSFSTKQRGMCMAVQSFLQPGSQGFLNVLAGYEDGSILWWDIRNPGIPVT-----------------SVKF-HSEPVLSLCIDGSCNGGISGAADDKIILYNLDHPMGSCVVKKEISLERPGISSTSIRPDCKIAATAGWDHRVRIYNYRKGNPLAILKYHHATCNSVSFSTDCKLMASASEDATVALWE-LYPP 392          
BLAST of NO12G02660 vs. NCBI_GenBank
Match: PAN26003.1 (hypothetical protein PAHAL_H01304 [Panicum hallii])

HSP 1 Score: 154.8 bits (390), Expect = 5.400e-34
Identity = 120/428 (28.04%), Postives = 177/428 (41.36%), Query Frame = 0
Query:    2 PKPKPSPEP-RILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVKLWDLGACRPRISWMPQQYSAPSLCMAPPTLSSMKGVLSLHA-LEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSVGGNVSATASAT-------------------------------PQQHHQ------QRLLLAPTAESEQFQLWDMRDGTRPAHTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPP 391
            P+ +P P+P  +LRGH A+V    F  S         PLL +G ADG ++ WD  + R   S      +A              GV S+ A    G ++++Q R GT   W + E G   RP+ +  T ++HFCK+S+  + S T S                                 PQ+H +      Q ++     ES Q +LWD+    +       S P++                                    YEDGS   WD+R+                       SVK    E+ +++ I  S N GI G A  ++V+F L+  +   T  K + L+ PG+    +R D K+ AT GWDHR+R++ +  G  LAVL+ HS+S N++ FSSD   + S   D  VA WE LYPP
Sbjct:    7 PRRRPPPDPAAVLRGHRAAVNDACFHPSL--------PLLFSGAADGELRAWDTASHRTASSVWAHGGTA--------------GVYSVAAGAGLGNKIISQGRDGTCKCWVIEEAGLSRRPILTVKTSTYHFCKMSLVKSPSFTHSVRSGSSCETSDAEPPREATEENTESHVVNPTEGPQEHGEGITSTGQNMMAIAGQESSQVELWDITSARK-----IISLPQSSSANTKDHPTKQKGLCMAVQAFIPYESAGYVNILSSYEDGSTLWWDVRK-----------------PGLPISSVKY-HSESALSIAIDASCNGGISGGADDKVVIFTLDHPKGAFTLRKEIELERPGIAGTTIRPDNKIAATAGWDHRIRVYNYNKGNALAVLKYHSDSCNAVTFSSDCKLMASCSTDTTVALWE-LYPP 388          
BLAST of NO12G02660 vs. NCBI_GenBank
Match: XP_017608722.1 (PREDICTED: protein DECREASED SIZE EXCLUSION LIMIT 1 [Gossypium arboreum] >KHG08828.1 Guanine nucleotide-binding protein subunit beta-like protein 1 [Gossypium arboreum])

HSP 1 Score: 154.5 bits (389), Expect = 7.100e-34
Identity = 122/431 (28.31%), Postives = 186/431 (43.16%), Query Frame = 0
Query:    5 KPSPEP-RILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVKLWDLGACRP-RISWMPQQYSAPSLCMAPPTLSSMKGVLSL--HALEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSV-----------GGNVSATAS--------------ATPQQHHQQRLLLAPTA------------ESEQFQLWDMRDGTR----PAHTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPP 391
            +P P+P  +LRGH ASV    F  S         P+L TG +DG +++WD    R    SW                 S+  G++++   +L +  ++++Q R GT+  WD+ E G    P  +  T S+HFCK+S+            G +    S              +   + H Q  L+  T+            +S + +LWD+  G R    P   F  S  + RG+                                 YEDGS+  WD+R      T                 SVK    E  ++L I  S N GI GAA  ++VL++L+     C   K +SL+ PG+ +  +R D K+ AT GWDHRVRI+ ++ G PLA+L+ H  + NS+++S++   + S  +D  VA WE LYPP
Sbjct:    7 RPPPDPVAVLRGHRASVTDACFHPSR--------PILFTGSSDGELRIWDTIQHRTVSSSW---------------AHSAAHGIIAVACSSLLETNKIISQGRDGTVKCWDIEEGGLSRTPSLTIRTNSYHFCKLSLVKKPVANTKQGDGTIDIELSNDSRGEIAKNQEEGSNSFEDHLQGGLIEETSVEGLKYVAMAGEQSSEIELWDLNTGERSVRLPQDNFVGS-IKQRGMCMAVKSFLLPGSEGFLNVLAG------------YEDGSILWWDIRYPGVPLT-----------------SVKF-HSEPVLSLCIDGSCNGGISGAADDKIVLYNLDYPTGSCIVKKEISLERPGISSTAIRPDSKITATAGWDHRVRIYNYRKGNPLAILKYHHATCNSVSYSTNCKLMASTSEDTTVALWE-LYPP 382          
BLAST of NO12G02660 vs. NCBI_GenBank
Match: XP_011080264.1 (protein DECREASED SIZE EXCLUSION LIMIT 1 [Sesamum indicum])

HSP 1 Score: 154.5 bits (389), Expect = 7.100e-34
Identity = 115/415 (27.71%), Postives = 182/415 (43.86%), Query Frame = 0
Query:    5 KPSPEP-RILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVKLWDLGACRP-RISWMPQQYSAPSLCMAPPTLSSMKGVLSLHALEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSV-----------------------GGNVSATASATPQQHHQQRLLLAPTAESEQFQLWDMRDGTR----PAHTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPP 391
            +P P+P  +LRGH ASV   SF  +          +L TG  DG +++WD    R    SW+                S+  G++S+ A  + R +++Q R GTI  WD+GE G    P+ +  T S+HFCK+S+                       GGN+S+T   + ++      + A   +    +LWD+  G +    P H+   +  + RG+                                 YEDGS+  WD+R   +  T                  VK    E  ++L        G+ G+A  ++V+F L+ +   C   K + L+ PG+G   +R D K+FAT GWDHRVRI+ ++ G  LA+L+ H  + N+++FS +   + S  +D  VA WE +YPP
Sbjct:    4 RPPPDPVAVLRGHRASVTDASFHPTKN--------ILFTGSTDGELRIWDTVQHRTISSSWVH---------------SAAHGIISVVAGGENR-VISQGRDGTIKYWDIGEAGLSRSPLITIKTNSYHFCKLSLLNNPHAEVEPTEVVKNHQESELSGGNMSSTELESDKKVEGSIYVAAAGEDLSVVELWDVNTGEKLIKLPNHSI--NSTKARGMCMAVKAFLPPESHGYVNVMSG------------YEDGSMVWWDIRNPASPMT-----------------CVKF-HSEPVLSLSFDNLCGGGVSGSADEKIVMFTLDPSTGSCLVKKEIILERPGIGGTSIRPDGKIFATAGWDHRVRIYDYRKGNALAILKYHHATCNAVSFSDNSKLMASSSEDTTVALWE-IYPP 361          
BLAST of NO12G02660 vs. NCBI_GenBank
Match: PUZ62377.1 (hypothetical protein GQ55_4G352400 [Panicum hallii var. hallii] >PUZ62378.1 hypothetical protein GQ55_4G352400 [Panicum hallii var. hallii])

HSP 1 Score: 154.1 bits (388), Expect = 9.300e-34
Identity = 120/428 (28.04%), Postives = 178/428 (41.59%), Query Frame = 0
Query:    2 PKPKPSPEP-RILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVKLWDLGACRPRISWMPQQYSAPSLCMAPPTLSSMKGVLSLHA-LEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSV-----------GGNVSATASAT--------------------PQQHHQ------QRLLLAPTAESEQFQLWDMRDGTRPAHTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPP 391
            P+ +P P+P  +LRGH A+V    F  S         PLL +G ADG ++ WD  + R   S      +A              GV S+ A    G ++++Q R GT   W + E G   RP+ +  T ++HFCK+S+            G+   T+ A                     PQ+H +      Q ++     ES Q +LWD+    +       S P++                                    YEDGS   WD+R+                       SVK    E+ +++ I  S N GI G A  ++V+F L+  +   T  K + L+ PG+    +R D K+ AT GWDHR+R++ +  G  LAVL+ HS+S N++ FSSD   + S   D  VA WE LYPP
Sbjct:    7 PRRRPPPDPAAVLRGHRAAVNDACFHPSL--------PLLFSGAADGELRAWDTASHRTASSVWAHGGTA--------------GVYSVAAGAGLGNKIISQGRDGTCKCWVIEEAGLSRRPILTVKTSTYHFCKMSLVKPPSFTHSVRSGSSCETSDAEPPREATEENTESHVVNPTEGPQEHGEGITSTGQNMMAIAGQESSQVELWDITSARK-----IISLPQSSSANTKDHPTKQKGLCMAVQAFIPYESAGYVNILSSYEDGSTLWWDVRK-----------------PGLPISSVKY-HSESALSIAIDGSCNGGISGGADDKVVIFTLDHPKGAFTLRKEIELERPGIAGTTIRPDNKIAATAGWDHRIRVYNYNKGNALAVLKYHSDSCNAVTFSSDCKLMASCSTDTTVALWE-LYPP 388          
BLAST of NO12G02660 vs. NCBI_GenBank
Match: XP_016731378.1 (PREDICTED: protein DECREASED SIZE EXCLUSION LIMIT 1 [Gossypium hirsutum])

HSP 1 Score: 153.3 bits (386), Expect = 1.600e-33
Identity = 122/432 (28.24%), Postives = 186/432 (43.06%), Query Frame = 0
Query:    3 KPKPSPEPRILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVKLWDLGACRP-RISWMPQQYSAPSLCMAPPTLSSMKGVLSL--HALEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSV-----------GGNVSATAS--------------ATPQQHHQQRLLLAPTA------------ESEQFQLWDMRDGTR----PAHTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPP 391
            +P P P   +LRGH ASV    F  S         P+L TG +DG +++WD    R    SW                 S+  G++++   +L +  ++++Q R GT+  WD+ E G    P  +  T S+HFCK+S+            G +    S              +   + H Q  L+  T+            +S + +LWD+  G R    P + F  S  + RG+                                 YEDGS+  WD+R      T                 SVK    E  ++L I  S N GI GAA  ++VL++L+     C   K +SL+ PG+ +  +R D K+ AT GWDHRVRI+ ++ G PLA+L+ H  + NS+++S++   + S  +D  VA WE LYPP
Sbjct:    7 RPPPGP-VAVLRGHRASVADACFHPSR--------PILFTGSSDGELRIWDTIQHRTVSSSW---------------AHSAAHGIIAVACSSLLETNKIISQGRDGTVKCWDIEEGGLSRTPSLTIRTNSYHFCKLSLVKKPVANTKQGDGTIDIELSNDSRGEIAKNQEEGSNSFEDHLQGGLIDETSVEGLKYVAMAGEQSSEIELWDLNTGERSVRLPQYNFVGS-IKQRGMCMAVQSFLLPGTEGFLNVLAG------------YEDGSILWWDIRYPGVPLT-----------------SVKF-HSEPVLSLCIDGSCNGGISGAADDKIVLYNLDYPTGSCVVKKEISLERPGISSTAIRPDSKIAATAGWDHRVRIYNYRKGNPLAILKYHHATCNSVSYSTNCKLMASTSEDTTVALWE-LYPP 382          
BLAST of NO12G02660 vs. NCBI_GenBank
Match: XP_022769120.1 (protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X1 [Durio zibethinus] >XP_022769121.1 protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X1 [Durio zibethinus])

HSP 1 Score: 152.1 bits (383), Expect = 3.500e-33
Identity = 116/427 (27.17%), Postives = 181/427 (42.39%), Query Frame = 0
Query:    5 KPSPEP-RILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVKLWDLGACRP-RISWMPQQYSAPSLCMAPPTLSSMKGVLSL--HALEQGRQLLTQLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSVGGNVSATA--------------------------SATPQQHHQQRLLLAPTAE-----------SEQFQLWDMRDGTRPAHTFAPSEPENRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEDGSLCGWDLRRCCTSFTXXXXXXXXXXXXXXAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLELAQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPLAVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPP 391
            +P P+P  +LRGH ASV    F  S         P+L TG +DG +++WD    R    SW+                S+  G++++   +L    ++++Q R GT+  WD+ E G    P  + ++ ++HFCK+S+     A A                          S T + H Q  L+     E           S + ++WD+  G R         P+   +                                 YEDGS+  WD+R      T                 SVK    E  ++L +  S N GI GAA  ++V+++L+     C   K +SL+ PG+ +  +R D K+ AT GWDHRVRI+ ++ G PLA+L+ H  + NS+++S+D   + S  +D  VA WE LYPP
Sbjct:   15 RPPPDPVAVLRGHRASVTDACFHPSK--------PILFTGSSDGELRIWDTTQHRTVSSSWVH---------------STAHGIIAVACSSLLGTNKVISQGRDGTVKYWDIEEGGLSRTPSLTISSNAYHFCKLSLVKKPIANAKQGKETVDIEISKDSRGKTAENQVEGSNTFEDHFQGGLIEETYVEELKYVAMAGEQSYEVEIWDLNTGERSVRL-----PQESAVGSSSFSTKERGMCMAVQSFLLPGSQGFLNVLAGYEDGSILWWDIRNPGIPIT-----------------SVKF-HSEPVLSLCVDGSCNGGISGAADNKIVIYNLDYPMGSCVVKKEISLERPGISSTSIRPDCKIAATAGWDHRVRIYNYRKGNPLAILKYHHATCNSVSYSNDCKLMASASEDTTVALWE-LYPP 394          
The following BLAST results are available for this feature:
BLAST of NO12G02660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25771.11.300e-11255.19guanine nucleotide-binding protein subunit beta [N... [more]
XP_020244973.13.800e-3527.83protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X... [more]
OMO87475.12.400e-3428.94hypothetical protein CCACVL1_09016 [Corchorus caps... [more]
OMO75319.13.200e-3428.50hypothetical protein COLO4_26188 [Corchorus olitor... [more]
PAN26003.15.400e-3428.04hypothetical protein PAHAL_H01304 [Panicum hallii][more]
XP_017608722.17.100e-3428.31PREDICTED: protein DECREASED SIZE EXCLUSION LIMIT ... [more]
XP_011080264.17.100e-3427.71protein DECREASED SIZE EXCLUSION LIMIT 1 [Sesamum ... [more]
PUZ62377.19.300e-3428.04hypothetical protein GQ55_4G352400 [Panicum hallii... [more]
XP_016731378.11.600e-3328.24PREDICTED: protein DECREASED SIZE EXCLUSION LIMIT ... [more]
XP_022769120.13.500e-3327.17protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010202NSK010202Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02660.1NO12G02660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592506gene_5435Nannochloropsis oceanica (N. oceanica CCMP1779)gene
DSE1gene4746Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02660.1NO12G02660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02660 ID=NO12G02660|Name=NO12G02660|organism=Nannochloropsis oceanica|type=gene|length=1188bp
ATGCCCAAGCCCAAGCCTTCCCCTGAGCCCCGTATCCTTCGGGGCCACGA
GGCAAGCGTGCAAGCAGTCTCCTTCCTGGGCAGCAGCGGTAGCAGCAATG
ATGGGGAGCCTCCCCTCCTCGTGACGGGCGATGCCGACGGCCATGTAAAG
CTCTGGGACCTTGGCGCCTGTCGTCCGCGAATAAGCTGGATGCCGCAGCA
GTATTCTGCCCCCTCCTTGTGTATGGCGCCGCCGACCCTGTCATCGATGA
AGGGTGTCTTGAGCTTGCATGCGCTCGAACAAGGCCGGCAATTGTTGACG
CAGCTTCGCGGGGGAACCATTTCGTTGTGGGACATGGGCGAATATGGAGG
GCAGCCCCGACCAGTGCGTTCCTGGGCGACGGGTTCGTTTCATTTTTGTA
AGGTCTCGGTGGGTGGAAATGTCAGTGCTACAGCCAGTGCAACGCCACAG
CAGCATCACCAGCAGCGGTTATTGTTGGCGCCGACAGCCGAGTCGGAACA
ATTTCAATTGTGGGACATGCGGGATGGCACGCGTCCAGCGCATACATTTG
CGCCTTCAGAGCCTGAGAACAGGGGGCTGTGTATGTGTCTTCGCTTAGTG
TTGCCCACCACTTCTGTTGGGGAGGGAGATGGTGCTGGTGGTGGTGCTGC
CGCTGGAGAGGGGTTTGCGCTGGCGGTGTATGAAGATGGTTCTCTATGTG
GATGGGATCTTAGACGTTGTTGTACCTCTTTTACGTCTTCTTCCTGCAGT
AGCAGTAGTAGCCGCAGTGGCAGTACTGCTGCGTTCTCTGTCAAGCTTAC
TGAGAAAGAAACGCCCGTGGCTTTGGATATCGGGCCGTCGGGAAACCGAG
GAATCTTAGGAGCAGCAGGTTGTGAGCTCGTCCTTTTTGACCTGGAGCTG
GCACAACACCGGTGTACGAAAAATAAATCCCTCTCGCTGAAGCACCCAGG
TGTAGGGGCAGTAGTAGTGCGGAGTGATGAGAAGCTTTTCGCAACGGGAG
GTTGGGACCATCGGGTGCGTATTTTCCGGTGGCAAGATGGCGCACCTTTG
GCAGTATTGAGAGGACATAGCGAAAGTGTGAACTCCTTGGCCTTTAGTTC
GGATATGAGTACGCTGGTCTCGGTGGGGAAGGACGCAAGGGTGGCGTCGT
GGGAAGGCCTTTACCCGCCGACAATACCACCACCGTAG
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protein sequence of NO12G02660.1

>NO12G02660.1-protein ID=NO12G02660.1-protein|Name=NO12G02660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=396bp
MPKPKPSPEPRILRGHEASVQAVSFLGSSGSSNDGEPPLLVTGDADGHVK
LWDLGACRPRISWMPQQYSAPSLCMAPPTLSSMKGVLSLHALEQGRQLLT
QLRGGTISLWDMGEYGGQPRPVRSWATGSFHFCKVSVGGNVSATASATPQ
QHHQQRLLLAPTAESEQFQLWDMRDGTRPAHTFAPSEPENRGLCMCLRLV
LPTTSVGEGDGAGGGAAAGEGFALAVYEDGSLCGWDLRRCCTSFTSSSCS
SSSSRSGSTAAFSVKLTEKETPVALDIGPSGNRGILGAAGCELVLFDLEL
AQHRCTKNKSLSLKHPGVGAVVVRSDEKLFATGGWDHRVRIFRWQDGAPL
AVLRGHSESVNSLAFSSDMSTLVSVGKDARVASWEGLYPPTIPPP*
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Synonyms
Publications