NO12G02260, NO12G02260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02260 vs. NCBI_GenBank
Match: EWM25843.1 (atp-dependent hsl protease atp-binding subunit hslu [Nannochloropsis gaditana]) HSP 1 Score: 816.2 bits (2107), Expect = 6.200e-233 Identity = 423/451 (93.79%), Postives = 441/451 (97.78%), Query Frame = 0 Query: 117 EVVAAALKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDYRGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 E VAAAL+P+ELV+YLD+YIVGQADAKRAVAIALRNRWRRHKLP+DLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIK+EAQKAVEEK+LQILTGPYAR+DAKETFRDLLRKGSLNDRL+DVEVPADRG GG+FDKAGAGPG GAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDYRGADASAEGVQRDLLPLIEGCTISTKHGN+NTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTE+DMYRILTEP+TNLIAQQVALLSTE +ALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVE+ISF+A+DK EG VITVDK LV RVNDLLVESD+SKYIL Sbjct: 140 EPVAAALRPRELVEYLDKYIVGQADAKRAVAIALRNRWRRHKLPDDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKSEAQKAVEEKVLQILTGPYAREDAKETFRDLLRKGSLNDRLIDVEVPADRG-PGGLFDKAGAGPGGGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDYRGADASAEGVQRDLLPLIEGCTISTKHGNINTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEEDMYRILTEPVTNLIAQQVALLSTENIALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEQISFDAADKPEGTVITVDKGLVHGRVNDLLVESDVSKYIL 589
BLAST of NO12G02260 vs. NCBI_GenBank
Match: XP_009036261.1 (hypothetical protein AURANDRAFT_37329 [Aureococcus anophagefferens] >EGB09147.1 hypothetical protein AURANDRAFT_37329 [Aureococcus anophagefferens]) HSP 1 Score: 538.5 bits (1386), Expect = 2.500e-149 Identity = 283/446 (63.45%), Postives = 357/446 (80.04%), Query Frame = 0 Query: 123 LKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPNVSMADFIGKFSR-AIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDYRGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 + P+ +V LD++IVGQ+ AKRAVAIALRNRWRR L E+L+ EI+PKNILMIGPTGCGKTEIARR++KL+ APFIKVEATKFTEVGFHGRDVDQIIRDLVE S+ +T+K+++E + EA++ VE +IL LTG A + +FR++LRKG L+DR +DV++PA + A PG + N +S+ DF+G+F+ A K E++++ ++EA PL+ E E++KL++ D+ +EA+ +VEESGIVFIDEIDKI N SDYRGADASAEGVQRDLLPLIEG TISTK+GNV+TDYILFI+SGAFHQ KP+DLLAELQGRLPIRVEL LTE DM+RILTEP TNLIAQQ ALL+TE V LEFTD A+REIARVA+L N+T+ENIGARRLHT +ERI+++ISF A D G ++TVDK V+ +V+DLL++SD+SKYIL Sbjct: 54 MTPRAIVDELDKHIVGQSAAKRAVAIALRNRWRRQLLGEELKAEIVPKNILMIGPTGCGKTEIARRLSKLAQAPFIKVEATKFTEVGFHGRDVDQIIRDLVEASITLTRKKKAEQFREEARRLVEGRILDTLTGLNAAQATQSSFREMLRKGVLDDRQIDVDLPAAQPGA--------QPPGGVIQLDQNNPISINDFLGRFNALAQQGKGRSERKRMSIREARPLIEEQELDKLLEGVDIHKEAVAAVEESGIVFIDEIDKIVNASDYRGADASAEGVQRDLLPLIEGSTISTKYGNVDTDYILFIASGAFHQAKPSDLLAELQGRLPIRVELDALTEADMHRILTEPETNLIAQQRALLATENVMLEFTDCAIREIARVASLANRTIENIGARRLHTCIERIIDDISFNACDYKPGDLVTVDKAYVEGKVDDLLIQSDLSKYIL 491
BLAST of NO12G02260 vs. NCBI_GenBank
Match: POM71208.1 (ATP-dependent protease HslVU, ATPase subunit [Phytophthora palmivora var. palmivora]) HSP 1 Score: 537.3 bits (1383), Expect = 5.600e-149 Identity = 282/450 (62.67%), Postives = 349/450 (77.56%), Query Frame = 0 Query: 119 VAAALKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDY-RGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 + LKP+E+V+ L++YIVGQADAKRAVAIALRNRWRR K+ ++LR E+ PKNILMIGPTGCGKTEIARR+AKLS+APF+KVEATKFTEVGFHGRDVDQIIRDLVE ++NM KK R E ++ + Q VE +IL +LTG + ++ TF LLR G L DRL+DVEVPA + +G G G G G E F RA K+ EK+++ + EA + E+EM+ +DM+DV REAIQ EE+GIVFIDEIDKIC+ DY R +D S+EGVQRDLLPLIEG ISTKHGNVNTD+ILF+ SGAFH KP+DLLAELQGRLPIRVELKGLTE+D++RILTEP+TNLI QQ+ L+ TE V L+FTD+AVREIARVAA +NKTVENIGARRLHTV+E++VEEISF++S+ A G+ +T+ K+ V RV L+ ++D+SK+IL Sbjct: 73 IGRKLKPREVVEQLNKYIVGQADAKRAVAIALRNRWRRQKISDELRQEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKSRKEKLRKQVQHLVESRILDVLTGANVAERSRSTFERLLRLGELEDRLIDVEVPAAKNPSGQPISFVG-GEGKGISME------------VFGRAFGEKK-TEKKRMTIAEARGVFEEMEMDNAIDMTDVVREAIQETEENGIVFIDEIDKICSSGDYRRSSDPSSEGVQRDLLPLIEGSVISTKHGNVNTDHILFVGSGAFHSSKPSDLLAELQGRLPIRVELKGLTEEDLHRILTEPVTNLIKQQIELIKTEGVTLDFTDDAVREIARVAAEINKTVENIGARRLHTVVEKVVEEISFDSSEMAPGSTVTITKEFVLERVGKLMKKTDLSKFIL 508
BLAST of NO12G02260 vs. NCBI_GenBank
Match: GAX98894.1 (ATP-dependent protease HslVU, ATPase subunit [Pythium insidiosum]) HSP 1 Score: 535.4 bits (1378), Expect = 2.100e-148 Identity = 281/446 (63.00%), Postives = 346/446 (77.58%), Query Frame = 0 Query: 123 LKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDY-RGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 LKP+E+V L++YIVGQ DAK+AVAIALRNRWRR K+PEDLR E+ PKNILMIGPTGCGKTEIARR+AKLS+APF+KVEATKFTEVGFHGRDVDQIIRDLVE ++NM KK+R E ++ E Q VE +IL LTG + ++ +F+ LLR G + DR + V+VP R +A +F + + + + FS+A K+ E++ + V E+ + E+EMEK +DM+DV REAI EE+GIVFIDEIDKIC+ D+ R AD S+EGVQRDLLPLIEGC ISTKHGNVNTD+ILFI SGAFH KP+DLLAELQGRLPIRVELKGLTE D+YRILTEP+TNLI QQ+ L+ TE V LEFTDEA+REIARVAA +NKTVENIGARRLHTVLE++VE+ISF++ + A GA +TV K+ V RV +LL ++D+SK+IL Sbjct: 29 LKPREVVDQLNKYIVGQPDAKKAVAIALRNRWRRLKIPEDLRAEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKQRKERVRKEVQHLVESRILDALTGANGTERSRASFQRLLRLGEMEDRTITVDVPVARNNASNPI----------SFVAGDKGLPIGEI---FSKAYGEKK-TERKAMTVAESRAVFEEMEMEKAIDMTDVVREAISETEENGIVFIDEIDKICSNGDFRRQADPSSEGVQRDLLPLIEGCVISTKHGNVNTDHILFIGSGAFHSAKPSDLLAELQGRLPIRVELKGLTEQDLYRILTEPVTNLIKQQIELIKTEDVHLEFTDEAIREIARVAAEINKTVENIGARRLHTVLEKVVEDISFDSCEMAPGATVTVTKEFVTERVGNLLKKTDLSKFIL 460
BLAST of NO12G02260 vs. NCBI_GenBank
Match: OWZ19301.1 (ATP-dependent protease [Phytophthora megakarya]) HSP 1 Score: 529.3 bits (1362), Expect = 1.500e-146 Identity = 276/450 (61.33%), Postives = 348/450 (77.33%), Query Frame = 0 Query: 119 VAAALKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDY-RGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 + LKP+E+V+ L++YIVGQADAKRAVAIALRNRWRR K+ ++LR E+ PKNILMIGPTGCGKTEIARR+AKLS+APF+KVEATKFTEVGFHGRDVDQIIRDLVE ++NM KK R E ++ + Q VE +IL +LTG + ++ TF LL G L DRL+DV+VPA + +G G G G G E F RA K+ EK+++ + E+ + E+EME +DM+DV REAIQ EE+GIVFIDEIDKIC+ D+ R +D S+EGVQRDLLPLIEG ISTKHGNVNTD+ILF+ SGAFH KP+DLLAELQGRLPIRVELKGLTE+D++RILTEP+TNLI QQ+ L+ TE V L+F+++A+REIARVAA +NKTVENIGARRLHTV+E++VEEISF++S+ A G+ +T+ K+ V RV L+ ++D+SK+IL Sbjct: 74 IGRKLKPREVVEQLNKYIVGQADAKRAVAIALRNRWRRQKISDELRQEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKSRKERLRKQVQHLVESRILDVLTGANVAERSRATFERLLHAGELEDRLIDVDVPAAKNPSGQPISFVG-GEGKGISME------------VFGRAFGEKK-TEKKRMTIAESRGVFEEMEMENAIDMTDVVREAIQETEENGIVFIDEIDKICSSGDFRRSSDPSSEGVQRDLLPLIEGSVISTKHGNVNTDHILFVGSGAFHSSKPSDLLAELQGRLPIRVELKGLTEEDLHRILTEPVTNLIKQQIELIKTEGVTLDFSEDAIREIARVAAEINKTVENIGARRLHTVVEKVVEEISFDSSEMAPGSTVTITKEFVLERVGKLMKKTDLSKFIL 509
BLAST of NO12G02260 vs. NCBI_GenBank
Match: XP_008896704.1 (ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica INRA-310] >ETI34672.1 ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica P1569] >ETK75019.1 ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica] >ETL28442.1 ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica] >ETL81692.1 ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica] >ETM34897.1 ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica] >ETN17114.1 ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica INRA-310] >ETO63470.1 ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica P1976] >ETP04572.1 ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica CJ01A1] >ETP32697.1 ATP-dependent protease HslVU, ATPase subunit [Phytophthora parasitica P10297] >KUF66786.1 ATP-dependent hsl protease ATP-binding subunit hslU [Phytophthora nicotianae] >KUF88586.1 ATP-dependent hsl protease ATP-binding subunit hslU [Phytophthora nicotianae] >KUF99517.1 Bzip transcription factor [Phytophthora nicotianae]) HSP 1 Score: 528.1 bits (1359), Expect = 3.400e-146 Identity = 277/446 (62.11%), Postives = 343/446 (76.91%), Query Frame = 0 Query: 123 LKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDY-RGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 LKP+E+V+ L++YIVGQADAKRAVAIALRNRWRR K+ ++LR E+ PKNILMIGPTGCGKTEIARR+AKLS+APF+KVEATKFTEVGFHGRDVDQIIRDLVE ++NM KK R E ++ + Q VE +IL +LTG + ++ TF LLR G L DR+++ +VP + G G G G G E F RA K+ E++++ + E+ + E+EME +DM+DV REAIQ EE+GIVFIDEIDKIC+ DY R +D S+EGVQRDLLPLIEG ISTKHGNVNTD+ILF+ SGAFH KP+DLLAELQGRLPIRVELKGLTE+D++RILTEP+TNLI QQ L+ TE V L FTD+AVREIARVAA VNKTVENIGARRLHTV+E++VEEISF++S+ A G+ +T+ K+ V RV L+ ++D+SK+IL Sbjct: 82 LKPREVVEQLNKYIVGQADAKRAVAIALRNRWRRQKISDELRQEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKHRKERLRKQVQHLVESRILDVLTGANVAERSRATFERLLRTGELEDRIIEFDVPVSKNPGGQPISFVG-GEGKGISME------------VFGRAFGEKK-TERKRMTIAESREVFEEMEMENAIDMTDVVREAIQETEENGIVFIDEIDKICSSGDYRRSSDPSSEGVQRDLLPLIEGSVISTKHGNVNTDHILFVGSGAFHSSKPSDLLAELQGRLPIRVELKGLTEEDLHRILTEPVTNLIKQQTELIQTEGVTLNFTDDAVREIARVAAEVNKTVENIGARRLHTVVEKVVEEISFDSSEMAPGSTVTITKEFVLERVGKLMKKTDLSKFIL 513
BLAST of NO12G02260 vs. NCBI_GenBank
Match: XP_009517532.1 (hypothetical protein PHYSODRAFT_469020 [Phytophthora sojae] >EGZ30257.1 hypothetical protein PHYSODRAFT_469020 [Phytophthora sojae]) HSP 1 Score: 525.4 bits (1352), Expect = 2.200e-145 Identity = 273/450 (60.67%), Postives = 347/450 (77.11%), Query Frame = 0 Query: 119 VAAALKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDY-RGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 + LKP+E+V+ L++Y+VGQADAKRAVAIALRNRWRR K+ ++LR E+ PKNILMIGPTGCGKTEIARR+AKLS+APF+KVEATKFTEVGFHGRDVDQIIRDLVE ++NM KK R E ++ + Q VE +IL +LTG + ++ TF LL G L DR+++++VPA + G G G G G E+ F RA K+ E++++ + E+ + E+EME +DM+DV REAIQ EE+GIVFIDEIDKIC+ D+ R +D S+EGVQRDLLPLIEG ISTKHGNVNTD+ILF+ SGAFH KP+DLLAELQGRLPIRVELKGLTE+D++RILTEP+TNLI QQV L+ TE V L FTD+AVREIARVAA +N+TVENIGARRLHTV+E++VE+ISF++S+ A G+ +T+ K+ V RV L+ ++D+SK+IL Sbjct: 82 IGRKLKPREVVEQLNKYVVGQADAKRAVAIALRNRWRRQKVSDELRREVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKSRKERLRKQVQHLVESRILDVLTGANVTERSRSTFERLLHAGELEDRIIEIDVPAAKNPGGQPISFVG-GEGKGISIEA------------FGRAFGEKK-TERKRMTIAESRGVFEEMEMENAIDMTDVVREAIQETEENGIVFIDEIDKICSSGDFRRSSDPSSEGVQRDLLPLIEGSVISTKHGNVNTDHILFVGSGAFHSSKPSDLLAELQGRLPIRVELKGLTEEDLHRILTEPVTNLIKQQVELIKTEGVNLNFTDDAVREIARVAAEINQTVENIGARRLHTVVEKVVEDISFDSSEMAPGSTVTITKEFVLERVGKLMKKTDLSKFIL 517
BLAST of NO12G02260 vs. NCBI_GenBank
Match: XP_024578459.1 (atp-dependent protease atpase subunit [Plasmopara halstedii] >CEG42090.1 atp-dependent protease atpase subunit [Plasmopara halstedii]) HSP 1 Score: 524.6 bits (1350), Expect = 3.700e-145 Identity = 275/450 (61.11%), Postives = 345/450 (76.67%), Query Frame = 0 Query: 119 VAAALKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDY-RGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 + LKP+E+V+ L++YIVGQADAKRAVAIALRNRWRR K+ ++LR EI PKNILMIGPTGCGKTEIARR+AKLS+APF+KVEATKFTEVGFHGRDVDQIIRDLVE ++NM KK R E ++ + Q VE +IL +LTG + ++ TF LLR G L DR+++ +VP + + G G G G E F RA KR ME++++ + E+ + E+EME +DM+DV REAI EE+GIVFIDEIDKIC+ D+ R +D S+EGVQRDLLPLIEG ISTKHGNVNTD+ILFI SGAFH KP+DLLAELQGRLPIRVELKGLTE+D++RILTEP+TNLI QQ+ L+STE V L FTD+A+REIARVA +N+TVENIGARRLHTV+E++VE+ISF++S+ A G+++T+ KD V RV L+ +D+SK+IL Sbjct: 78 IGRKLKPREVVEQLNKYIVGQADAKRAVAIALRNRWRRQKISDELRQEISPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKNRKEKMRKQVQHLVENRILDVLTGANVAERSRATFERLLRTGELEDRMIEFDVPVSKNPSAQPISIVG-GEGKGIPME------------VFGRAFGEKR-MERKRMTIAESRGVFEEMEMENAIDMTDVVREAIHESEENGIVFIDEIDKICSSGDFRRSSDPSSEGVQRDLLPLIEGSVISTKHGNVNTDHILFIGSGAFHSSKPSDLLAELQGRLPIRVELKGLTEEDLHRILTEPVTNLIKQQIELISTEGVVLSFTDDAIREIARVANEINQTVENIGARRLHTVMEKVVEDISFDSSEMAPGSIVTITKDFVLERVGKLMKTTDLSKFIL 513
BLAST of NO12G02260 vs. NCBI_GenBank
Match: XP_002186384.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65854.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 523.5 bits (1347), Expect = 8.300e-145 Identity = 276/457 (60.39%), Postives = 366/457 (80.09%), Query Frame = 0 Query: 123 LKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDD-------AKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPN-VSMADFIGKFSRAIMPKR-PMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSD---YRGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 ++P E+V LDR+IVGQ DAKRAVAIA+RNRWRR +LPEDLR E+ P+N+L++GPTG GKTE+ RR+AKL+DAPF+KVEATKFTEVG+HGRDVDQIIRDL+++S+ +T+K +E ++++A+ VE++IL +LTGP + +++FRD+LR+G L+D+ ++VEVP G GAG G G ++PN V+M+D + S A K+ P E++K+ + EA ++LEVE+EKL++ D+ +EAIQ+VEESGIVFIDEIDKIC+ D R ADASAEGVQRDLLPLIEG TI+TK+GNVNTDYILF+++GAFH KP+DLL ELQGRLPIRVELKGLTEDD+YRILTEP+ NL+ QQV L+ +E V+LEF D+AVREIAR+AAL+N+T+ENIGARRLHTV+ERI+EE+SFEA++ +GA++ VDK LVQ+R+ + +SD+SKYIL Sbjct: 1 MRPSEVVHELDRHIVGQHDAKRAVAIAMRNRWRRQQLPEDLRKEVTPRNVLLVGPTGVGKTEVMRRMAKLNDAPFLKVEATKFTEVGYHGRDVDQIIRDLMDVSMQLTRKVWTEKLRSQARAMVEDRILDLLTGPAQQGKGGTGDARGRDSFRDMLRQGMLDDQEIEVEVP-----QGDRNPDVGAGGGDG----TSPNIVAMSDLWQRMSGAQGGKKTPSERKKLPISEAREVILEVELEKLLENVDMKKEAIQAVEESGIVFIDEIDKICSARDSFSTRSADASAEGVQRDLLPLIEGTTINTKYGNVNTDYILFVAAGAFHSVKPSDLLPELQGRLPIRVELKGLTEDDLYRILTEPVANLVRQQVELIGSEGVSLEFDDDAVREIARMAALLNRTIENIGARRLHTVMERIMEELSFEAAELDKGAILRVDKALVQTRLEESTKKSDLSKYIL 448
BLAST of NO12G02260 vs. NCBI_GenBank
Match: CCI50713.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 520.4 bits (1339), Expect = 7.100e-144 Identity = 266/449 (59.24%), Postives = 345/449 (76.84%), Query Frame = 0 Query: 119 VAAALKPKELVKYLDRYIVGQADAKRAVAIALRNRWRRHKLPEDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKAEAQKAVEEKILQILTGPYARDDAKETFRDLLRKGSLNDRLVDVEVPADRGSAGGVFDKAGAGPGSGAFAESNPNVSMADFIGKFSRAIMPKRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDYRGADASAEGVQRDLLPLIEGCTISTKHGNVNTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEDDMYRILTEPITNLIAQQVALLSTEKVALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEEISFEASDKAEGAVITVDKDLVQSRVNDLLVESDISKYIL 568 V LKP+E+V L+ I+GQ AKRAVAIALRNRWRR K+ DLR EI PKNILMIGPTGCGKTEIARR+AKL++APFIKVEATKFTEVGFHGRDVDQIIRDLVE ++N+ KK++ E ++ + Q+ VE +IL L GP + +++ F +LL+ G + +R++ ++VP RG+ G G +F S + + + IGK + ++ E R + V E+ + E+EME +DM+DV REAI EE+GIVFIDEIDKIC+ D+R ADAS+EGVQRDLLPL+EG ISTKHGNVNTD+ILFI SGAFH KP+DLLAELQGRLPIRVELKGLTE D+YRILTEP+++L+ QQ+ LL TEK+ L+FT++A+REIARVA +N T+ENIGARRLHT++E++VE+ISF+ASD + G+ +TV KDLV+ RV +L ++D+SK+IL Sbjct: 116 VGRKLKPREVVSILNTCIIGQESAKRAVAIALRNRWRRMKVTPDLRPEISPKNILMIGPTGCGKTEIARRLAKLAEAPFIKVEATKFTEVGFHGRDVDQIIRDLVENAINLVKKQKQERVRQQVQQLVERRILDALIGPNSTANSRAAFENLLKTGEMEERMITIDVPVSRGN--------GMGGTPISFMASQGPLPVGEIIGKAYTTM--EKKSETRNMTVAESRSVFEEMEMENAIDMTDVVREAIHETEENGIVFIDEIDKICSTGDFRSADASSEGVQRDLLPLLEGSVISTKHGNVNTDHILFIGSGAFHSSKPSDLLAELQGRLPIRVELKGLTESDLYRILTEPVSSLVRQQIELLKTEKIDLDFTEDAIREIARVATDINNTIENIGARRLHTIMEKVVEDISFDASDLSPGSKVTVTKDLVRERVGPMLKKADLSKFIL 554 The following BLAST results are available for this feature:
BLAST of NO12G02260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02260 ID=NO12G02260|Name=NO12G02260|organism=Nannochloropsis oceanica|type=gene|length=1704bpback to top protein sequence of NO12G02260.1 >NO12G02260.1-protein ID=NO12G02260.1-protein|Name=NO12G02260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=568bpback to top Synonyms
Publications
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