NO12G01960, NO12G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01960 vs. NCBI_GenBank
Match: EWM25844.1 (Protein of unknown function DUF726 [Nannochloropsis gaditana]) HSP 1 Score: 766.5 bits (1978), Expect = 8.400e-218 Identity = 464/895 (51.84%), Postives = 564/895 (63.02%), Query Frame = 0 Query: 1 MVLRMLNKEERVCLLGLVALSLPVHDQALGEYNTQLLRVVSGLLDLKEHHCHALQPLLHSEGNDLEIRQAQLQAFLKPF----------VLTGRPEQQKGHTVASAVAAGRERPDRYDPPQPQQGTQGAHKEWEAK----QAQLRYLILRDLLVHLACLSMYDARTRRIMVRLALDAFEVEWRDMASIEALTASHLHEIWEASQAKDKVHTGLRYAKITAAALGGGALLAFTGGLAAPAIGVGLSALSATGAVVAGFTTTASVATLFGASGAGLVGFKMKRRTAALSEFQFRHVERSEEEEDSDLGRMAICICISGWLLNDESEYDTPFGVEPRNSDVAARLRLFYSLYNPDNVKYAAILATEFKGREDDLERECLHKYGTSPFDSYDTWSAVGGGSRSTTNTNSSMSIGSSKNLYKDVSEAEKEEVFRLIASYDKDSVSRITDAD-------ARRTRFT---------------MKKSASRSSSI------------SGGGVMCRTTSRDEDGQLTEEVRRIVGMRLNSPPFPCLSPRPPQTAKAEMSTSQSINEEE---------DGEKETEESVLLLRDTSRQSRGLQERSGDCGESTQSRLNSETSEILLELVSEDSVEVVPPWWSETFPHLETFTLRWESKALFNLGSSVMEIVASLGQQAALEVLTFTAAATLVSALAWPITLLQAADMIDSTWTLACEKADRAGQLLAQT--------QPVTV-----------------------------------------------------------ADLGSPASGLVHTVVLMGAPISCSESSWQKARGMVADRLVNCYSRKDWVLKIMYRYQKLVTNAAGIAPVIVAGVENVDVTDVVPGHQHYATKIKDILLLVGLDDSF 772 M L ML+ EERVCLLGL+ALS+P DQA G YN +LLR VS +L L+E+HC AL PLLHSEGND++IR QL AFLKPF + K HT + +E P Q + K + + + RYLILRDL++ LAC S+YDARTRRIM+RLA DAFE+ WR++A +EA TAS+L+EIWEA Q K+K++ GLRYAKITAAA+GGGALLA TGGLAAPAIG+GLSA+SATGAVVAG T+TASVATLFGASGAGLVG+KM+RRTAAL +F+FRHVE S ++++SDLGRMAICICISGWL+ DESEYDTPFGVEPRNSDVAARLRLFYS +NP N+KYA +LA EF+GRE +LE ECL KY SPFD D G S+S K LY + EAEKEE+F+LIASYD+ SV TD +RR R + S S+S++ V ++ + +ED L E+ RIVG++ +S +S S+SI+ E D E L SRQ +++ C +S L ++ + LL+ D + PWW + FP+LETFTL WESKAL +GSSVM+IVAS GQQAALEVLTFTAAA+LVSALAWPITLLQAADMID++WT+ACEKADRAGQLLAQ +P+ + + GSP SGL+ TVVLMGAP+SCSESSW KAR +VA RLVNCYS+KDWVL +MYRY KLVTNAAGIAPV V G+ENVDV+++VPGHQHYATKIKDILLLVGL+DS+ Sbjct: 1 MALAMLSTEERVCLLGLLALSMPSQDQAFGRYNLRLLRTVSNMLGLQENHCSALYPLLHSEGNDVKIRHTQLLAFLKPFEGAESLAFDEKVQFAQASCKNHTYTEELGLKQE-------PPADQAYHISGKRFSGSAVYHERRRRYLILRDLMISLACRSLYDARTRRIMMRLASDAFEISWRNIACVEAFTASYLYEIWEARQEKEKINKGLRYAKITAAAVGGGALLALTGGLAAPAIGIGLSAMSATGAVVAGLTSTASVATLFGASGAGLVGYKMRRRTAALDQFEFRHVEPSGDKKESDLGRMAICICISGWLVEDESEYDTPFGVEPRNSDVAARLRLFYSRHNPQNIKYATLLADEFQGRESELEHECLRKYNASPFD--DRNKKKRGNSKS-----------PRKYLYDSLPEAEKEEIFQLIASYDEPSVHAGTDEHTHESVRISRRARLSRGDXXXXXXXXXXXXXDSSYSKSTTTLINMMHECDDNGDEVSVESQSNTENEDYLLNAEIHRIVGLQYSS-------------TSEGLSPSKSIDRAEIDPMMLSRIDREPRCSNLPFCL-SRSRQVENRKDQGEKCEVQDESELGAKVFDALLDSECRDLSQDFSPWWLDMFPYLETFTLHWESKALSKMGSSVMDIVASFGQQAALEVLTFTAAASLVSALAWPITLLQAADMIDNSWTIACEKADRAGQLLAQILVRKERGHRPIVLIGFSMGARLIMACLSELARIHNSWEDGQNDKGQKPEVQIKASTSAVQLSPTASTPSREKTETGSPVSGLIDTVVLMGAPVSCSESSWVKARKVVAGRLVNCYSKKDWVLSLMYRYHKLVTNAAGIAPVHVCGIENVDVSELVPGHQHYATKIKDILLLVGLEDSY 861
BLAST of NO12G01960 vs. NCBI_GenBank
Match: OQR83074.1 (hypothetical protein ACHHYP_15165 [Achlya hypogyna]) HSP 1 Score: 175.6 bits (444), Expect = 6.400e-40 Identity = 182/657 (27.70%), Postives = 247/657 (37.60%), Query Frame = 0 Query: 148 YDARTRRIMVRLALDAFEVEWRDMASIEALTASHLHEIWEASQAKD-KVHTGLRYA------KITAAALGGGALLAFTGGLAAPAIGVGLSALSATGA----VVAGFTTTASVATLFGASGAGLVGFKMKRRTAALSEFQFRHVERSEEEEDSDLGRMAICICISGWLLNDESEYDTPFGVEPRNSDVAARLRLFYSLYNPDNVKYAAILATEFKGREDDLERECLHKYGTSPFDSYDTWSAVGGGSRSTTNTNSSMSIGSSKNLYKDVSEAEKEEVFRLIASYDKDSVSRITDADARRTRFTMKKSASRSSSISGGGVMCRTTSRDEDGQLTEEVRRIVGMRLNSPPFPCLSPRPPQTAKAEMSTSQSINEEEDGEKETEESVLLLRDTSRQSRGLQERSGDCGESTQSRLNSETSEILLELVSEDSVEVVPPWWSETFPHLETFTLRWESKALFNLGSSVMEIVAS-LGQQAALEVLTFTAAATLVSALAWPITLLQAADMIDSTWTLACEKADRAGQLLAQT--------QPVTVADLGSPAS---------------GLVHTVVLMGAPISCSESSWQKARGMVADRLVNCYSRKDWVLKIMYRYQKLVTNAAGIAPVIVAGVENVDVTDVVPGHQHYATKIKDILLLVGLDD 770 YDAR R + L + + W +AS EA L EA++ K KV + R+ KI AA+ GG LLA TGGL APA+ G +AL GA + LFG +GAGLVGFK RRT+ + +F+F + M + IC+SGWL +DE+++ P+G PR L FY +NPD + + F+GRED+L +YG +P DED VG+RL++ TA E Q R Q W PH + F L+WE L G + L A +V+ FT ATL +A A P ++ AA IDS WT+A +AD G+LLA +PV++ G A GLV VL+G P+ E W +AR +VA RLVN YS DW+L +MYRYQ ++AGI PV V GVEN +++DV+ GH Y TKI IL ++ L++ Sbjct: 150 YDARARAMFRFLVQEIHALPWAVIASEEAALGMAL--FLEATELKSRKVASPRRWGDWKRNLKIGTAAVAGGTLLALTGGLVAPALAAGFTALGGVGAXXXXXXXXXXXXXXXSVLFGTAGAGLVGFKTDRRTSGIKQFEFELLSAG--------SGMHVYICVSGWLDHDEADFKRPWGT-PRE-----YLLAFYQQFNPDKIPSIDAMLQRFRGREDELFASLRRQYGLAP---------------------------------------------------------------------------------------------DEDP---------VGVRLDN---------YDATASPE-----------------------------QLRAWQ-------------------------------------WKHRLPHGDQFCLKWEKAVLLRYGECIRTFTTKMLLGYAQGQVVKFTVFATLFAAAALPTMVVNAASFIDSEWTMAMTRADMCGKLLATALLQRDQGLRPVSLVGYGMGARLIFACLKRLAAEDGLGLVENAVLLGCPVPIVEEEWAQARRVVAGRLVNGYSENDWMLAVMYRYQGWALDSAGIGPVEVFGVENANLSDVIGGHLEYPTKIGLILEMLRLEE 613
BLAST of NO12G01960 vs. NCBI_GenBank
Match: XP_008611500.1 (hypothetical protein SDRG_07445 [Saprolegnia diclina VS20] >EQC35216.1 hypothetical protein SDRG_07445 [Saprolegnia diclina VS20]) HSP 1 Score: 172.2 bits (435), Expect = 7.000e-39 Identity = 174/659 (26.40%), Postives = 245/659 (37.18%), Query Frame = 0 Query: 148 YDARTRRIMVRLALDAFEVEWRDMASIEALTASHLHEIWEASQAKD-KVHTGLRYA------KITAAALGGGALLAFTGGLAAPAIGVGLSAL----SATGAVVAGFTTTASVATLFGASGAGLVGFKMKRRTAALSEFQFRHVERSEEEEDSDLGRMAICICISGWLLND-ESEYDTPFGVEPRNSDVAARLRLFYSLYNPDNVKYAAILATEFKGREDDLERECLHKYGTSPFDSYDTWSAVGGGSRSTTNTNSSMSIGSSKNLYKDVSEAEKEEVFRLIASYDKDSVSRITDADARRTRFTMKKSASRSSSISGGGVMCRTTSRDEDGQLTEEVRRIVGMRLNSPPFPCLSPRPPQTAKAEMSTSQSINEEEDGEKETEESVLLLRDTSRQSRGLQERSGDCGESTQSRLNSETSEILLELVSEDSVEVVPPW-WSETFPHLETFTLRWESKALFNLGSSVMEIVASLG-QQAALEVLTFTAAATLVSALAWPITLLQAADMIDSTWTLACEKADRAGQLLAQT--------QPVTVADLGSPAS---------------GLVHTVVLMGAPISCSESSWQKARGMVADRLVNCYSRKDWVLKIMYRYQKLVTNAAGIAPVIVAGVENVDVTDVVPGHQHYATKIKDILLLVGLDD 770 YDAR R + L + E+ W +AS E+ L EA++ K KV + R+ KI AA+ GG LLA TGGL APA+ G +AL + LFG +GAGL G+K RRT+ + +F+F + M + ICISGWL N+ E+++ P+G PR L FY +NP+ + + F+GREDDL +YG +P D+D V GV T + +D +++R W W PH + F L+WE L G+ + + + A E++ +T ATL +A A P ++ A IDS WT+A +AD G+LLA +PV++ G A GL+ VL+G PI E W AR +VA RLVN YS DW+L +MYRYQ ++AGI+P+ V GVENVD++ V+ GH Y TKI IL L+ L+D Sbjct: 167 YDARARSMFRFLVHEIHELPWTVIASEESALGMAL--FLEANELKSRKVESPRRWGDWKRNLKIGTAAVAGGTLLALTGGLVAPALAAGFTALXXXXXXXXXXXXXXXXVTAATVLFGTAGAGLAGYKTDRRTSGIKQFEFELLTAG--------SGMNVYICISGWLENNSEADFKRPWGT-PRE-----YLHAFYKQFNPEKIASIDAMLVRFRGREDDLFASLRRQYGLAP---------------------------------------------------DEDPV----------------------------GVRLETVADAKDAPTPDQLR------------------------------------------------------------------------------------------------AWQWKHRMPHGDQFCLKWEKDVLLRYGTCIRSFTSKMVLGYARGEIVKYTVFATLFAAAALPTMVVNACSFIDSEWTMAMSRADMCGKLLATALLQREQGLRPVSLVGYGMGARLIFACLKHLASEDGVGLIENAVLLGCPIPVVEDDWASARKVVAGRLVNGYSENDWMLAVMYRYQGWALDSAGISPIEVHGVENVDLSQVIGGHLEYPTKIGLILDLLHLED 634
BLAST of NO12G01960 vs. NCBI_GenBank
Match: XP_005856338.1 (hypothetical protein NGA_2042400, partial [Nannochloropsis gaditana CCMP526] >EKU20020.1 hypothetical protein NGA_2042400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 169.5 bits (428), Expect = 4.600e-38 Identity = 80/99 (80.81%), Postives = 91/99 (91.92%), Query Frame = 0 Query: 673 SGLVHTVVLMGAPISCSESSWQKARGMVADRLVNCYSRKDWVLKIMYRYQKLVTNAAGIAPVIVAGVENVDVTDVVPGHQHYATKIKDILLLVGLDDSF 772 SGL+ TVVLMGAP+SCSESSW KAR +VA RLVNCYS+KDWVL +MYRY KLVTNAAGIAPV V G+ENVDV+++VPGHQHYATKIKDILLLVGL+DS+ Sbjct: 2 SGLIDTVVLMGAPVSCSESSWVKARKVVAGRLVNCYSKKDWVLSLMYRYHKLVTNAAGIAPVHVCGIENVDVSELVPGHQHYATKIKDILLLVGLEDSY 100
BLAST of NO12G01960 vs. NCBI_GenBank
Match: ETI45782.1 (hypothetical protein F443_09723 [Phytophthora parasitica P1569] >ETM45614.1 hypothetical protein L914_09382 [Phytophthora parasitica]) HSP 1 Score: 167.5 bits (423), Expect = 1.700e-37 Identity = 212/824 (25.73%), Postives = 314/824 (38.11%), Query Frame = 0 Query: 3 LRMLNKEERVCLLGLVALSLPVHDQALGEYNTQLLRVVSGLLDLKEHHCHALQPLLHSEGNDLEIRQAQLQAFLKPFVLTGRPEQ--QKGHTVASAVAAGRERPDRYDPPQPQQGTQGAHKEWEAKQAQ-----------------LRYLILRDLLVHLACLSMYDARTRRIMVRLALDAFEVEWRDMASIE-----ALTASHLHEIWEASQAKDKVHTGLRYAKITAAALGGGALLAFTGGLAAPAIGVGLS----ALSATGAVVAGFTTTASVATLFGASGAGLVGFKMKRRTAALSEFQFRHVERSEEEEDSDLGRMAICICISGWLLNDESEYDTPF-GVEPRNSDVAARLRLFYSLYNPDNVKYAAILATEFKGREDDLERECLHKYGTSPFDSYDTWSAVGGGSRSTTNTNSSMSIGSSKNLYKDVSEAEKEEVFRLIASYDKDSVSRITDADARRTRFTMKKSASRSSSISGGGVMCRTTSRDEDGQLTEEVRRIVGMRLNSPPFPCLSPRPPQTAKAEMSTSQSINEEEDGEKETEESVLLLRDTSRQSRGLQERSGDCGESTQSRLNSETSEILLELVSEDSVEVVPPW-WSETFPHLETFTLRWESKALFNLGSSVMEIVA-SLGQQAALEVLTFTAAATLVSALAWPITLLQAADMIDSTWTLACEKADRAGQLLAQT--------QPVTVADLGSPA-------------------SGLVHTVVLMGAPISCSESSWQKARGMVADRLVNCYSRKDWVLKIMYRYQKLVTNAAGIAPVIVAGVENVDVTDVVPGHQHYATKIKDILLLVGLD 769 + L++ ++ + GL A LP A+ + +T L+ + L L EH + + Q +A+L +LT R ++ K H +SA + P++ G K W K R I++ LL YDAR+R ++ RL L A E++W D+ E L A E AK K+ R A I AAA+ GGALLA TGGLAAPAI L+ G +GAG++G K RT + +F F V + M + IC+SGWL +D D P G D LR FY NP+ V + +KGRED+ Y S+ G+S+N +++ K + D DAR + FT S S + S S Q + + G S+ L ++ E + W W + FP + + L WE L G S+ A + A E++ +TA A L +A+A P +L+ AD+ID+ WT+ AD +G+LLA +PVT+ G A G+V VL+G+P+ + W AR +V+ RL+N YS KDW+L +MYRYQ N+AGIAP+ +AGVENVD+++++ GH Y +KI I+ L+ L+ Sbjct: 29 MEFLSESQKRGVAGLCACLLP----AVTDGSTSLVWSKAYLKLLIEHF--------------VGLSSTQTEAYLP--ILTSRRQELVAKAHEPSSATVEELDPAPFLALVVPEREAAGGFKRWARKLKHRTERDALEASDLLTTDTFRLEIVKRLLWFTVKSVGYDARSRTLLRRLVL-AMELQWTDVTREEVDIGQTLYAEATAMPLEKVAAKPKITDWKRNAAIGAAAVTGGALLAVTGGLAAPAIAASLTXXXXXXXXXXXXXXXXXXXXXXXXXXGTAGAGVMGMKADTRTRGVHDFSFDLVSAGD--------GMNVYICVSGWLDDD----DPPVRGFRRAWGDSREYLRAFYRQKNPEKVDQVDQVMDRYKGREDEFFAILRRTY--------------------------SIDTGNSENDPLGIADLSK---------------MAVADQDARYSDFTSLNSDSNAISSSN---------------------------------------------------------------------------------QSTTANTGTSSVWELGTKH-------------EPLRAWRWKDRFPQGDQYCLIWEEAGLRRFGKSMRTFAAEQVSNYATTEIVKYTALAALFAAVAIPRVILRLADIIDNAWTVTMNAADTSGKLLADALRKREQGLRPVTLIGYGMGARLIFSCLKELAKSETIDESCGIVENAVLLGSPVPMARDDWANARRVVSGRLINGYSDKDWMLGVMYRYQGWALNSAGIAPIDIAGVENVDLSEIIGGHLEYKSKIGAIMDLLQLE 684
BLAST of NO12G01960 vs. NCBI_GenBank
Match: XP_008892727.1 (hypothetical protein PPTG_01245 [Phytophthora parasitica INRA-310] >ETK85766.1 hypothetical protein L915_09514 [Phytophthora parasitica] >ETL39195.1 hypothetical protein L916_09417 [Phytophthora parasitica] >ETL92302.1 hypothetical protein L917_09354 [Phytophthora parasitica] >ETN20871.1 hypothetical protein PPTG_01245 [Phytophthora parasitica INRA-310] >ETO74440.1 hypothetical protein F444_09787 [Phytophthora parasitica P1976] >ETP15622.1 hypothetical protein F441_09656 [Phytophthora parasitica CJ01A1] >ETP43670.1 hypothetical protein F442_09625 [Phytophthora parasitica P10297] >KUF87464.1 Transmembrane and coiled-coil domain-containing protein 4 [Phytophthora nicotianae]) HSP 1 Score: 167.5 bits (423), Expect = 1.700e-37 Identity = 212/824 (25.73%), Postives = 314/824 (38.11%), Query Frame = 0 Query: 3 LRMLNKEERVCLLGLVALSLPVHDQALGEYNTQLLRVVSGLLDLKEHHCHALQPLLHSEGNDLEIRQAQLQAFLKPFVLTGRPEQ--QKGHTVASAVAAGRERPDRYDPPQPQQGTQGAHKEWEAKQAQ-----------------LRYLILRDLLVHLACLSMYDARTRRIMVRLALDAFEVEWRDMASIE-----ALTASHLHEIWEASQAKDKVHTGLRYAKITAAALGGGALLAFTGGLAAPAIGVGLS----ALSATGAVVAGFTTTASVATLFGASGAGLVGFKMKRRTAALSEFQFRHVERSEEEEDSDLGRMAICICISGWLLNDESEYDTPF-GVEPRNSDVAARLRLFYSLYNPDNVKYAAILATEFKGREDDLERECLHKYGTSPFDSYDTWSAVGGGSRSTTNTNSSMSIGSSKNLYKDVSEAEKEEVFRLIASYDKDSVSRITDADARRTRFTMKKSASRSSSISGGGVMCRTTSRDEDGQLTEEVRRIVGMRLNSPPFPCLSPRPPQTAKAEMSTSQSINEEEDGEKETEESVLLLRDTSRQSRGLQERSGDCGESTQSRLNSETSEILLELVSEDSVEVVPPW-WSETFPHLETFTLRWESKALFNLGSSVMEIVA-SLGQQAALEVLTFTAAATLVSALAWPITLLQAADMIDSTWTLACEKADRAGQLLAQT--------QPVTVADLGSPA-------------------SGLVHTVVLMGAPISCSESSWQKARGMVADRLVNCYSRKDWVLKIMYRYQKLVTNAAGIAPVIVAGVENVDVTDVVPGHQHYATKIKDILLLVGLD 769 + L++ ++ + GL A LP A+ + +T L+ + L L EH + + Q +A+L +LT R ++ K H +SA + P++ G K W K R I++ LL YDAR+R ++ RL L A E++W D+ E L A E AK K+ R A I AAA+ GGALLA TGGLAAPAI L+ G +GAG++G K RT + +F F V + M + IC+SGWL +D D P G D LR FY NP+ V + +KGRED+ Y S+ G+S+N +++ K + D DAR + FT S S + S S Q + + G S+ L ++ E + W W + FP + + L WE L G S+ A + A E++ +TA A L +A+A P +L+ AD+ID+ WT+ AD +G+LLA +PVT+ G A G+V VL+G+P+ + W AR +V+ RL+N YS KDW+L +MYRYQ N+AGIAP+ +AGVENVD+++++ GH Y +KI I+ L+ L+ Sbjct: 29 MEFLSESQKRGVAGLCACLLP----AVTDGSTSLVWSKAYLKLLIEHF--------------VGLSSTQTEAYLP--ILTSRRQELVAKAHEPSSATVEELDPAPFLALVVPEREAAGGFKRWARKLKHRTERDALEASDLLTTDTFRLEIVKRLLWFTVKSVGYDARSRTLLRRLVL-AMELQWTDVTREEVDIGQTLYAEATAMPLEKVAAKPKITDWKRNAAIGAAAVTGGALLAVTGGLAAPAIAASLTXXXXXXXXXXXXXXXXXXXXXXXXXXGTAGAGVMGMKADTRTRGVHDFSFDLVSAGD--------GMNVYICVSGWLDDD----DPPVRGFRRAWGDSREYLRAFYRQKNPEKVDQVDQVMDRYKGREDEFFAILRRTY--------------------------SIDAGNSENDPLGIADLSK---------------MAVADQDARYSDFTSLNSDSNAISSSN---------------------------------------------------------------------------------QSTTANTGTSSVWELGTKH-------------EPLRAWRWKDRFPQGDQYCLIWEEAGLRRFGKSMRTFAAEQVSNYATTEIVKYTALAALFAAVAIPRVILRLADIIDNAWTVTMNAADTSGKLLADALRKREQGLRPVTLIGYGMGARLIFSCLKELAKSETIDESCGIVENAVLLGSPVPMARDDWANARRVVSGRLINGYSDKDWMLGVMYRYQGWALNSAGIAPIDIAGVENVDLSEIIGGHLEYKSKIGAIMDLLQLE 684
BLAST of NO12G01960 vs. NCBI_GenBank
Match: XP_002177709.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50523.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 159.8 bits (403), Expect = 3.600e-35 Identity = 182/662 (27.49%), Postives = 262/662 (39.58%), Query Frame = 0 Query: 199 LRYAKITAAALGGGALLAFTGGLAAPAIGVG----LSALSATGAVVAGFTTTASVATLFGASGAGLVGFKMKRRTAALSEFQFRHV--ERSEEEE---DSDLGRMAICICISGWLLNDESEYDTPFGVEPRNSDVAAR---LRLFYSLYNPDNVKYAAILATEFKGREDDLERECLHKYGTSPFDSYDTWSAVGGGSRSTTNTNSSMSIGSSKNLYKDVSEAEKEEVFRLIA--SYDKDSVSRITDADA--RRTRFTMKKSAS---RSSSISGGGVMCRTTSRD--EDGQLTEEVRRIVGMRLNSPPFPCLSPRPPQTAKAEMSTSQSINEEEDGEKETEESVLLLRDTSRQSRGLQERSGDCGESTQSRLNSETSEILLELVSEDSVEVVPPWWSETFPHLETFTLRWESKALFNLGSSVMEIVASLGQQAALEVLTFTAAATLVSALAWPITLLQAADMIDSTWTLACEKADRAGQLLAQT--------QPVT---------------------------------------------VADL-------------GSPASGLVHTVVLMGAPISCSESSWQKARGMVADRLVNCYSRKDWVLKIMYRYQKL-VTNAAGIAPVIVAGVENVDVTDVVPGHQHYATKIKDILLLVGLDDSFR 773 +R KI A+ G L A TGGLAAP I G G GL +KM+RRT L+EF+FR + S E+E D+ + ICISGW L D+ ++ P+GV P ++ R L FY++++P ++ A + +KG E DL KYG P + + L+ ++ +KE + +L Y S+ I R R K A+ R ++S + R + Q E V VG R + ST+ S+ + E+ E V L R + W + E +T++WES+ L L SV ++ L ++L TA +TL+SA AWP L+ AA+MID TWTLA E++D AG+ LA++ +PVT VADL PAS +V VVLMG P S SSW+ R +VA RL+NC+S+KD +L +M+++++L + G PV V GVEN+DV+D+V GHQ Y DIL V FR Sbjct: 501 MRGIKIGGTAMAAGTLFAITGGLAAPGIAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGGLAAYKMQRRTQGLTEFEFRKETGKASREKEGQIDTVDAELFSTICISGW-LRDKFDFQRPWGVSPSRPELTDRQELLERFYTIHSPSHISRCAKILDHWKGEEKDLWGLLRQKYGQDP--------------------DHLFPLEKGPRLHASLTLEQKEVIDQLFVELGYTPKSLDEIKTQPTPFERIRKGWNKQAAGPRRDENLSTSHIPVGPAHRSLADSLQSPESVETYVGSR----------AEVTSSGFESFSTALSMLPPDKRSDESTEKVELPR-----------------------------------------HIATVWDYPSIYGGEQYTVQWESELLTELCDSVNDLARDLVSGGTAQILKHTALSTLISAFAWPYALVNAANMIDGTWTLAVERSDEAGRELARSLLLSRAGHRPVTLVGFSFGARAIYSCLKELARLQEKWEDFCEDEDSSRSGKVLQNQSVADLELDESNKDYFRYMREPAS-IVEDVVLMGLPNHLSLSSWKACRQVVAGRLINCFSQKDLILSLMFQFKRLGLKPVCGTCPVNVPGVENIDVSDLVSGHQDYTLVNGDILKRVRHCQPFR 1089
BLAST of NO12G01960 vs. NCBI_GenBank
Match: XP_005856336.1 (hypothetical protein NGA_2022700, partial [Nannochloropsis gaditana CCMP526] >EKU20018.1 hypothetical protein NGA_2022700, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 157.9 bits (398), Expect = 1.400e-34 Identity = 82/126 (65.08%), Postives = 99/126 (78.57%), Query Frame = 0 Query: 534 QERSGDCGESTQSRLNSETSEILLELVSEDSVEVVPPWWSETFPHLETFTLRWESKALFNLGSSVMEIVASLGQQAALEVLTFTAAATLVSALAWPITLLQAADMIDSTWTLACEKADRAGQLLAQ 660 +++ C +S L ++ + LL+ D + PWW + FP+LETFTL WESKAL +GSSVM+IVAS GQQAALEVLTFTAAA+LVSALAWPITLLQAADMID++WT+ACEKADRAGQLLAQ Sbjct: 2 KDQGEKCEVQDESELGAKVFDALLDSECRDLSQDFSPWWLDMFPYLETFTLHWESKALSKMGSSVMDIVASFGQQAALEVLTFTAAASLVSALAWPITLLQAADMIDNSWTIACEKADRAGQLLAQ 127
BLAST of NO12G01960 vs. NCBI_GenBank
Match: XP_024576704.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG40335.1 Uncharacterized conserved protein [Plasmopara halstedii]) HSP 1 Score: 157.9 bits (398), Expect = 1.400e-34 Identity = 199/769 (25.88%), Postives = 286/769 (37.19%), Query Frame = 0 Query: 65 LEIRQAQLQAFLKPFVLTGRPEQ--QKGHTVASAVAAGRERPDRYDP--------PQPQQGTQGAHKEWEAKQ-----------------AQLRYLILRDLLVHLACLSMYDARTRRIMVRLALDAFEVEWRDMASIE-----ALTASHLHEIWEASQAKDKVHTGLRYAKITAAALGGGALLAFTGGLAAPAIGVGLSALSATGAVV----AGFTTTASVATLFGASGAGLVGFKMKRRTAALSEFQFRHVERSEEEEDSDLGRMAICICISGWLLNDESEYDTPFGVEPRNSDVAARLRLFYSLYNPDNVKYAAILATEFKGREDDLERECLHKYGTSPFDSYDTWSAVGGGSRSTTNTNSSMSIGSSKNLYKDVSEAEKEEVFRLIASYDKDSVSRITDADARRTRFTMKKSASRSSSISGGGVMCRTTSRDEDGQLTEEVRRIVGMRLNSPPFPCLSPRPPQTAKAEMSTSQSINEEEDGEKETEESVLLLRDTSRQSRGLQERSGDCGESTQSRLNSETSEILLELVSEDSVEVVPPW-WSETFPHLETFTLRWESKALFNLGSSVMEIVA-SLGQQAALEVLTFTAAATLVSALAWPITLLQAADMIDSTWTLACEKADRAGQLLAQT--------QPVTVADLGSPA-------------------SGLVHTVVLMGAPISCSESSWQKARGMVADRLVNCYSRKDWVLKIMYRYQKLVTNAAGIAPVIVAGVENVDVTDVVPGHQHYATKIKDILLLVGLD 769 +E+ +A+L +LT R ++ QK H + A A DP P+ A K W+ K + R I++ LL YDAR+R ++ RL L A E+ W D+ E L A + E AK K+ R A I AAA+ GGALLA TGGLAAPAI L+AL G + LFG +GAG++G K RT R +E+ R A W D EY LR FY NP+ V + T +KGRED+ KY ++ E+ IA K + D DAR + FT S S + S S++ S + + EL ++ E + W W + FP + + L WE L G S+ A + A E++ +TA A L +A+A P +L+ AD+ID+ WT+ AD AG+LLA +PVT+ G A G+V +L+G+P+ + W AR +V+ RL+N YS KDW+L +MYRYQ N+AGIAP+ +AG+ENVD+++++ GH Y +KI I+ L+ L+ Sbjct: 72 VELDSTHTEAYLP--ILTSRKQELAQKSHEPSVATVA------ELDPSPFLALVVPEQDADASNAFKRWKKKLRHKAEREGFEVSELVTIEKFRLEIIKKLLWFTVKSVGYDARSRTLLRRLVL-AMELVWSDVTKEEIEIGQTLYAEAIAMPLEKVVAKPKITDWKRNAAIGAAAMTGGALLAVTGGLAAPAIAASLTALGGAGITIXXXXXXXXXXXXXXXLFGTAGAGVMGMKADTRT------------RDDEDPPVKGFRRA-------W--GDSREY----------------LRAFYRQKNPEKVDQVDQVMTRYKGREDEFFAILRRKY--------------------------------------NIESGSLEDDPLAIADMSK---MALADQDARYSDFTSLNSDSNAIS-----------------------------------------------------------------------------------------------SSQIESSGTSSVWELGTKH--EPLRAWRWKDRFPQGDQYCLIWEEAGLRRFGKSMRTFAAEQVSSYATTELVKYTALAALFAAVAIPRVILRLADIIDNVWTVTMNAADSAGKLLADALRKREQGLRPVTLVGYGMGARLIFSCLKELAKSDSIDLSCGIVENAILLGSPVPMARDDWGNARRVVSGRLINGYSEKDWMLGVMYRYQGWALNSAGIAPIDIAGIENVDLSEIIGGHLEYKSKIGAIMDLLQLE 656
BLAST of NO12G01960 vs. NCBI_GenBank
Match: GAX97171.1 (Hypothetical protein PINS_005066 [Pythium insidiosum]) HSP 1 Score: 157.9 bits (398), Expect = 1.400e-34 Identity = 178/675 (26.37%), Postives = 251/675 (37.19%), Query Frame = 0 Query: 129 QLRYLILRDLLVHLACLSMYDARTRRIMVRLALDAFEVEWR-----DMASIEALTASHLHEIWEASQAKDKVHTGLRYAKITAAALGGGALLAFTGGLAAPAIGVGLSALSATGA----VVAGFTTTASVATLFGASGAGLVGFKMKRRTAALSEFQFRHVERSEEEEDSDLGRMAICICISGWLLNDESEYDTPFGVEPRNSDVAARLRLFYSLYNPDNVKYAAILATEFKGREDDLERECLHKYGTSPFDSYDTWSAVGGGSRSTTNTNSSMSIGSSKNLYKDVSEAEKEEVFRLIASYDKDSVSRITDADARRTRFTMKKSASRSSSISGGGVMCRTTSRDEDGQLTEEVRRIVGMRLNSPPFPCLSPRPPQTAKAEMSTSQSINEEEDGEKETEESVLLLRDTSRQSRGLQERSGDCGESTQSRLNSETSEILLELVSEDSVEVVPPW-WSETFPHLETFTLRWESKALFNLGSSVMEIV-ASLGQQAALEVLTFTAAATLVSALAWPITLLQAADMIDSTWTLACEKADRAGQLLAQT--------QPVTVADLGSPA----------------SGLVHTVVLMGAPISCSESSWQKARGMVADRLVNCYSRKDWVLKIMYRYQKLVTNAAGIAPVIVAGVENVDVTDVVPGHQHYATKIKDILLLVGLD 769 + + IL+ LL YDAR R ++ R+ ++ + W+ +++ L A E + AK V R I AAA+ GGALLA TGGLAAPAI L+AL G LFG +GAG+VG K RT + +F F + + M + IC+SGWL D+ G D LR FY NP+ V A + +KGRED E F ++ R T K S S F L P S + S +E ++G D E++ W W + FP + + L WE + L G S+ + A E++ TA A L +A+A P TLL+AADMID+ W L AD +G+ LA+T +PVT+ G A G+V VVL+G P+ W+ AR +V+ RL+N YS DW+L +MYRYQ N+AGI+P+ V GVENV+++ ++ GH Y KI IL ++GL+ Sbjct: 231 EFQLTILKQLLWFTVKAVGYDARARTLL-RVMVETMRLPWKVITVEEISIGRTLFAEATAMPMEKAAAKPSVWDWKRNVTIGAAAVTGGALLALTGGLAAPAIAASLTALGGAGVXXXXXXXXXXXXXXTTILFGTAGAGVVGLKTDARTRGVQQFHFDLISAGD--------GMNVYICVSGWLDEDDPPQR---GFRRAWGDSREYLRAFYRKTNPEKVDQADQVLDRYKGRED--------------------------------------------------------EFFSIL-------------------RKTYKMSGSAE-------------------------------------FDPLEMIP-------SSLAASADENDNG-------------------------------------------------ADGQELMRAWRWKDRFPQGDQYCLAWEEELLRKFGKSMRSFAKEQVISYANNELVRLTAFAALFAAVAIPRTLLRAADMIDNIWVLMMNNADASGKFLAETLRRREQGLRPVTLIGYGMGARLIFMCLKKLAKYDDCHGIVENVVLLGTPLPVVAQDWKNARRVVSGRLINGYSEHDWMLAVMYRYQGWALNSAGISPIEVPGVENVNLSSIIKGHMEYKNKIGAILDVLGLE 725 The following BLAST results are available for this feature:
BLAST of NO12G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01960 ID=NO12G01960|Name=NO12G01960|organism=Nannochloropsis oceanica|type=gene|length=2757bpback to top protein sequence of NO12G01960.1 >NO12G01960.1-protein ID=NO12G01960.1-protein|Name=NO12G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=849bpback to top Synonyms
Publications
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