NO12G01400, NO12G01400 (gene) Nannochloropsis oceanica

Overview
NameNO12G01400
Unique NameNO12G01400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3648
Alignment locationchr12:432538..436185 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:432538..436185 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO12G01400 vs. NCBI_GenBank
Match: EWM25888.1 (hypothetical protein Naga_100054g2 [Nannochloropsis gaditana])

HSP 1 Score: 723.4 bits (1866), Expect = 7.300e-205
Identity = 383/737 (51.97%), Postives = 457/737 (62.01%), Query Frame = 0
Query:   40 RWKWKLAGLTAVLLLGAG----YFRWRQGAIFNPPYCAWRFISNFSSWNVAFPDSTSVYHVSLMHLNKGDEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPDAGPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFIVFFRIYQDRADSPPSLPPSSFSAFQDGLNKCFGPQGHYPEETPQEWGWACPPTVALRRVFQYGSGASFAPLPMCGYRRKHGIAYNDITPPVIYCASNREPNRPHNFFLPSPFYLKQKFANKDAKYLFSCAEAPGVPEGTNGMGGWVY------------------QRAKQGKTDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELWARVTGKLPRTANGLYAPPFIANLSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREIGPQWLEDRKFTLWFGPPHVEVEKEGTFXXXXXXXXXXLRPAVVADEKALFLPWGRSFEGGLIPFPGVLYRQILSRGQVLKSMRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTASLAEIIPPTCERWEEEIEKEEEDQPLHVVGKHMCCGSSAPEWCHDPGFVASKMKSFYPLVEYYHRHPKR--------GRGNKKGK----VDEDD--VMERIGGEDDDCRKMTLVKEEE-SFQPSCVEKEQAEISGKEEREEREVSLSMEEMAGSYLNLVSDIWT 740
            R +W     T V+L G G    +  W++GAI NPPYCAWRF+SNF+SWNVAFPDSTS+YHVSLM++ +G+EIK+SS SLPYARYFSFQ+YSIPDFVSSAS+RDVDI+P        GPNCYTNL+AA AG +QGGYEV++T+HGD G+ NE+RALADDR SG+FI+FFRIYQDR     SLPP   S   D + +CFGP+G YP ETPQEWGWACPP+VA++R+ +   G  F  LP+CGYRRKHGI YND+TPPVI C S R PN P NFFLPSP Y+KQKFANKDAKYLFSCAEAP VPE + G GGW +                  + A + +T R                                 ELWARVTG+LPRTAN LY PPFIAN SDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLRE GP WLEDR F LW GPP   +                  P +V +EK LFLPWGR F G  IPFPG+LYRQILS+GQV+    A                                                 P A LAEIIPPTCE+     ++ E  +PLHV+  ++CCG +APEWCHDP FVASKM+ FYPLVEYY R P R        G  ++ G+    VDE+D   MERIGG  +  RKMTL   +E    P C+ + +   +  E    ++ S S  +   S  ++V ++WT
Sbjct:   12 RRQWGSMEFTMVILAGLGATIFWGHWQKGAILNPPYCAWRFVSNFASWNVAFPDSTSIYHVSLMYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIP-----SGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVG---SLPP--MSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHL------------PGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAA------GNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEK-----QEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYYLRRPPRDTRDGLEAGGRDENGEALEIVDEEDEVEMERIGGGSEGARKMTLYDGQELGVLPPCMTRGKCPHASGE--GAKDSSQSGVDAVNSLFSIVGEMWT 713          
BLAST of NO12G01400 vs. NCBI_GenBank
Match: EWM25889.1 (hypothetical protein Naga_100054g2 [Nannochloropsis gaditana])

HSP 1 Score: 641.0 bits (1652), Expect = 4.800e-180
Identity = 344/674 (51.04%), Postives = 410/674 (60.83%), Query Frame = 0
Query:   99 MHLNKGDEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPDAGPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFIVFFRIYQDRADSPPSLPPSSFSAFQDGLNKCFGPQGHYPEETPQEWGWACPPTVALRRVFQYGSGASFAPLPMCGYRRKHGIAYNDITPPVIYCASNREPNRPHNFFLPSPFYLKQKFANKDAKYLFSCAEAPGVPEGTNGMGGWVY------------------QRAKQGKTDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELWARVTGKLPRTANGLYAPPFIANLSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREIGPQWLEDRKFTLWFGPPHVEVEKEGTFXXXXXXXXXXLRPAVVADEKALFLPWGRSFEGGLIPFPGVLYRQILSRGQVLKSMRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTASLAEIIPPTCERWEEEIEKEEEDQPLHVVGKHMCCGSSAPEWCHDPGFVASKMKSFYPLVEYYHRHPKR--------GRGNKKGK----VDEDD--VMERIGGEDDDCRKMTLVKEEE-SFQPSCVEKEQAEISGKEEREEREVSLSMEEMAGSYLNLVSDIWT 740
            M++ +G+EIK+SS SLPYARYFSFQ+YSIPDFVSSAS+RDVDI+P        GPNCYTNL+AA AG +QGGYEV++T+HGD G+ NE+RALADDR SG+FI+FFRIYQDR     SLPP   S   D + +CFGP+G YP ETPQEWGWACPP+VA++R+ +   G  F  LP+CGYRRKHGI YND+TPPVI C S R PN P NFFLPSP Y+KQKFANKDAKYLFSCAEAP VPE + G GGW +                  + A + +T R                                 ELWARVTG+LPRTAN LY PPFIAN SDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLRE GP WLEDR F LW GPP   +                  P +V +EK LFLPWGR F G  IPFPG+LYRQILS+GQV+    A                                                 P A LAEIIPPTCE+     ++ E  +PLHV+  ++CCG +APEWCHDP FVASKM+ FYPLVEYY R P R        G  ++ G+    VDE+D   MERIGG  +  RKMTL   +E    P C+ + +   +  E    ++ S S  +   S  ++V ++WT
Sbjct:    1 MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIP-----SGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVG---SLPP--MSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHL------------PGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAA------GNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEK-----QEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYYLRRPPRDTRDGLEAGGRDENGEALEIVDEEDEVEMERIGGGSEGARKMTLYDGQELGVLPPCMTRGKCPHASGE--GAKDSSQSGVDAVNSLFSIVGEMWT 639          
BLAST of NO12G01400 vs. NCBI_GenBank
Match: EWM27118.1 (hypothetical protein Naga_100046g25 [Nannochloropsis gaditana])

HSP 1 Score: 342.4 bits (877), Expect = 3.500e-90
Identity = 214/610 (35.08%), Postives = 290/610 (47.54%), Query Frame = 0
Query:   65 AIFNPPYCAWRFISNFSSWNVAFPDSTSVYHVSLMHLNKGDEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPDA-GPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFIVFFRIYQDRA-DSPPSLPPSSFSAFQDGLNKCFGPQGHYPEETPQEWGWACPPTVALRRVFQYGSGASFAPLPMCGYRRKHG---IAY-NDITP---PVIYCASNREPNRPHNFFLPSPFYLKQKFANKDAKYLFSCAEAPGVPEGTNGMGGWVYQRAKQGKTDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELWARVTGKLPRTANGLYAPPFIANLSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREIGPQWLEDRKFTLWFGPPHVEVEKEGTFXXXXXXXXXXLRPAVVADEKALFLPWGRS-FEGGLIPFPGVLYRQILSRGQVLKSMRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTASLAEIIPPTCERWEEEIEKEEED------QPLHVVGKHMCCGSSAPEWCHDPGFVASKMKSFYPLVEYYHRHPK 659
            A+ NPPYCAWRF+ N  +WNVAFPD  S+YHV  + ++KGDE K+ + S PYARY S+QTY +   +S  S+RDVDI+      PDA GPNCY NL+AA  G+RQGGY + +TA GDQ Y NE+RAL D  +SG F +FFRIY + A   PP  P              +G    Y ++   EWGWA PP +  +R   +     +  +P C YRR+ G   +AY ++I P   P         PN+ +N FLP     + KFA+KDA Y+ S AE   V  G+  M                                                 LWARVTG LPR    LY PP++AN +DYDVRYVSLS+V R++P+R + T+ D  ITEHY + + P    DRKFT+W  PP VE                   P  V DE  + + WG S F GG++ + G+LYRQ+++R QV+  +  G                                                  + +  I+P  C+  +     E  D       PL +  +  CC + AP  C  P +V  +M  +YP VEY+   P+
Sbjct:  131 ALINPPYCAWRFVGNHDAWNVAFPDMRSLYHVMQIQMSKGDEFKLVAESFPYARYCSYQTYDLRTLMSHQSLRDVDIV------PDANGPNCYANLTAAQEGLRQGGYTLYMTARGDQNYTNELRALPDSIESGQFDLFFRIYVEEALQGPPQAP--------------WGHLPPYGKDLAFEWGWAPPPRLYAKRA--HLKDGEWREVPFCQYRRRKGFKLLAYLSEIWPAPSPPFAGHPAVAPNKANNVFLPKYTDRQGKFASKDANYVASVAEPRHVRNGSEAM-------------------------------------------------LWARVTGTLPRVPGSLYTPPYVANATDYDVRYVSLSAVHRTIPFRNHATVADTQITEHYQKRLPPGVEWDRKFTIWVVPPQVE----------------SAYPRQVMDENPVIMKWGASLFGGGIVEYTGLLYRQVMARSQVV-GLEQG----------------------------------------------ALSASGVVNIVPEACQSGQVGPHGEGADAAMKAGDPLEM--EQFCCSTEAPMECFLPEYVRYRMGPYYPQVEYFTGGPE 604          
BLAST of NO12G01400 vs. NCBI_GenBank
Match: EWM24273.1 (protein of unknown function DUF1214 [Nannochloropsis gaditana])

HSP 1 Score: 236.9 bits (603), Expect = 2.100e-58
Identity = 182/640 (28.44%), Postives = 264/640 (41.25%), Query Frame = 0
Query:   33 ASAPPRKRWKWKLAGLTAVLLLGAGYFRWRQGAIFNP-PYCAWRFISNFSSWNVAFPDSTSVYHVSLMHLNKGDEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPDAGPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFIVFFRIYQDRADSPPSLPPSSFSAFQDGLNKCFGPQGHYPEETPQEWGWACPPTVALRRVFQYGSGASFAPLPMCGYRRKHG-------------IAYNDITPPVIYCASNREPNRPHNFFLPSPFYLKQKFANKDAKYLFSCAEAPGVPEGTNGMGGWVYQRAKQGKTDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELWARVTGKLPRTANGLYAPPFIANLSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREI-GPQWLEDRKFTLWFGPPHVEVEKEGTFXXXXXXXXXXLRPAVVADEKALFLPWGRSFEGGLIPFPGVLYRQILSRGQVLKSMRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTASLAEIIPPTCERWEEEIEKEEEDQPLHVVGK-HMCCGS---SAPEWCHDPGFVASKMKSFYPLVEYY 654
            A A   + W      +   +L+   + ++    + NP P C+WR      S NVA+ D+ + +H  +M LN+G+E  V S SLPY+R+FSFQTYS+    S   +RD +I+         GPN Y N+SAA  G +QGGY + +T  G +GYPNE++ L   + SGFF++ FRIY D  D P  + P +  +  D                PQ WGW  PP V++RR  + G   S+  +P C  R+  G                 DI PP        +P R +NF LP        F++ D + L S A  P V  G                                                    ++WARV  KLPRT + LY+PPFIAN SDYDVRY+S +S  R+ P   ++TL D  I +HY   + GP    D +F+LW GP +    ++                     E AL + WG       +  P +LY Q+LS      S RA                                                 PT  LA ++   C R  E    +EED+    + + ++CC S     P +C  P F+   ++ ++P V ++
Sbjct:   25 AGAERTRGWLTFSMHVLVFILMSFIFLKYTGLVLRNPAPLCSWRL---SQSLNVAWTDTQASHHSMVMFLNEGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIV------SQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIY-DVGDFPHPMAPWAHLSRGDA-------------RQPQRWGWTPPPRVSVRRTMRQG---SWREIPSCVTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPH----DHLFSSVDTRTLVSAAAIPAVDVG----------------------------------------------------DVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGPVNAPPPEQARL------------------ENALIMRWGE------VARPALLYNQLLS------SSRAA-------------------------------------------SGAAPPT--LANVVVNECPRAAEHDNHDEEDEDGSFINEGNVCCLSEPRGMPTFCRMPEFLHLNLREYFPAVTFF 507          
BLAST of NO12G01400 vs. NCBI_GenBank
Match: EWM22223.1 (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana])

HSP 1 Score: 97.1 bits (240), Expect = 2.600e-16
Identity = 100/390 (25.64%), Postives = 155/390 (39.74%), Query Frame = 0
Query:   72 CAWRFISNFSSWNVAFPDSTSVYHVSLMHLNKG--DEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPDAGPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFIVFFRIYQDRADSPPSLPPSSFSAFQDGLNKCFGPQGHYPEETPQEWGWACPPTVALRRVFQYGSGASFAPLPMCGYRRKHGIAYNDITPPVIYCASNREPNRPHNFFLPSPFYLKQKFANKDAKYLFSCAEAPGVPEGTNGMGGWVYQRAKQGKTDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELWARVTGKLPRTANGLYAPPFIANLSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREIGPQWL 460
            CAW+  S   ++N+AFPD  +VYHV  +   +G  D I++     P+ RYFS+Q+Y        AS+RD +I  +   +P A P         T G  +G Y+V +T +GDQGYPNE+  +A   ++    V  R+Y     SP                           +    WG   PP V   ++F   SG             + G+ Y              +   P+N  + S F      A   ++ L +  +A     G N    W    ++    D G                                 L A +TG LP +  GL+ PPF+A+ +  + RY+SLS+   ++P    QTL D+DI + Y +  G ++L
Sbjct:   44 CAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEG-DYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATP-------GTTLG-DKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLLRVYAYDKQSP---------------------------DKTDIWGAVAPPVVKY-KLFNPSSG-------------QGGLWY------------TLDQCTPNNTKIASQFI--STIATGYSRVLATENKA-----GANPCPTW---NSRDQFLDGGGVQG----------------------------NLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYL 332          
BLAST of NO12G01400 vs. NCBI_GenBank
Match: XP_005854425.1 (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >EKU21938.1 hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 84.0 bits (206), Expect = 2.200e-12
Identity = 92/391 (23.53%), Postives = 137/391 (35.04%), Query Frame = 0
Query:   72 CAWRFISNFSSWNVAFPDSTSVYHVSLMHLNKG--DEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPDAGPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFIVFFRIYQDRADSPPSLPPSSFSAFQDGLNKCFGPQGHYPEETPQEWGWACPPTVALRRVFQYGSGASFAPLPMCGYRRKHGIAYNDITPPVIYCASNREPNRPHNFFLPSPFYLKQKFANKDAKYLFSCAEAPGVPEGTNGMGG-WVYQRAKQGKTDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELWARVTGKLPRTANGLYAPPFIANLSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREIGPQWL 460
            CAW+  S   ++N+AFPD  +VYHV  +   +G  D I++     P+ RYFS+Q+Y        AS+RD +I  +   +P A P         T G  +G Y+V +T +GDQGYPNE+  +A   ++    V  R+Y     SP                           +    WG   PP V                                                 +  F PS                             +G GG W       G   +G                                 L A +TG LP +  GL+ PPF+A+ +  + RY+SLS+   ++P    QTL D+DI + Y +  G ++L
Sbjct:  190 CAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEG-DYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATP-------GTTLG-DKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLLRVYAYDKQSP---------------------------DKTDIWGAVAPPVV------------------------------------------------KYKLFNPS-----------------------------SGQGGLWYTLDQFDGGGVQG--------------------------------NLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYL 434          
BLAST of NO12G01400 vs. NCBI_GenBank
Match: EWM21339.1 (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana])

HSP 1 Score: 79.0 bits (193), Expect = 7.200e-11
Identity = 89/371 (23.99%), Postives = 136/371 (36.66%), Query Frame = 0
Query:  102 NKGDEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPDAGPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFIVFFRIYQDRADSPPSLPPSSFSAFQDGLNKCFGPQGHYPEETPQEWGWACPPTVALRRVFQYGSGASFAPLPMCGYRRKHGIAYNDITPPVIYCASNREPNRPHNFFLPSPFYLKQKFANKDAKYLFSCAEAPGVPEGT---NGMGGWVY--QRAKQGKTDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELWARVTGKLPRTANGLYAPPFIANLSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLRE-IGPQWLEDRKFTL 467
            +K +E+       PY RYFSF  Y      S +++ D DI       P +G N + ++      +  G YE+ ++  G +GYPNEM AL  D  S + ++ FR+          L        + G N+              EWG+   P V    +  + +G            R+    +   T  VI        +   N + P    +  +  N     LF   + P +  G    N    +++     + GK D                                      R+TGKLPRT  GL+    +A+ + YD RYVS +S      Y  Y+T+HD DI  HY  +  G  W  DR + L
Sbjct:  153 HKEEEVYRIRGKFPYVRYFSFTVYD-ASLQSISTLHDTDI------RPSSGKNPFNDIEVTEDNM--GTYEIYVSKDGSKGYPNEMAALRPDSTSPYALLAFRL---------QLLDPRAGEDRSGKNR--------------EWGYVDMPLV---EILNHRNGE-------WDIIRRCSDEFQARTEEVI-----ENLDLTFNTWWPKNLQIGTE-CNATEFSLFDPEQNPIIRRGVAVRNANENYIFWCMPKEIGKKD-----------------------------------YIIRITGKLPRTPYGLFDDIRVADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDW--DRMYNL 438          
BLAST of NO12G01400 vs. NCBI_GenBank
Match: XP_005855631.1 (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >EKU20720.1 hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 77.4 bits (189), Expect = 2.100e-10
Identity = 98/406 (24.14%), Postives = 144/406 (35.47%), Query Frame = 0
Query:   65 AIFNPPY--CAWRFISNFSSWNVAFPDSTSVYHVSLMHLNKGDEIKVSSPSLPY--ARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPDAGPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALAD---DRD--SGFFIVFFRIYQDRADSPPSLPPSSFSAFQDGLNKCFGPQGHYPEETPQEWGWACPPTVALRRVFQYGSGAS---FAPLPMCGYRRKHGIA------YNDITPPVIYCASNREPNRPHNF--FLPSPFYLKQKFANKDAKYLFSCAEAPGVPEGTNGMGGWVYQRAKQGKTDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELWARVTGKLPRTANGLYAPPFIANLSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHY 451
            A+  PP   CAW+       +NVA+PD  ++Y V +M       I     S P    RYFS Q+ ++      ++++D +I    P +         N  A  +    G Y + +T  GDQG  NE+    +   DR   S   ++  R Y    D PP             ++    P    P +  + +G+A PP V  R+   +    S   +   P C   R   +       +  + PP    A     N+ +NF  +L         + N DA YL + A              W      + K  +                                  L ARVTG LP T+  L+  P IAN  D DVRY+S SS+          TL DA     Y
Sbjct:  125 ALRTPPQRNCAWQAYITGKQYNVAYPDLQAIYQVLVMLKTTEKNIFRVRGSFPQEGVRYFSLQSNNVDVGFPISTIKDYEIEVDDPENT-------RNPFAEDSDRPIGTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVMLMRFYTSDPDRPP-------------VSSKTDPPASQPND--RLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPF---APPVRHNKNNNFVLYLGEDTATAGVYPNLDAAYLLAVA--------------WQLSPELKDKPKK---------------------------------RLMARVTGTLPVTSRNLFTDPKIANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFY 458          
BLAST of NO12G01400 vs. NCBI_GenBank
Match: WP_030514284.1 (hypothetical protein [Nocardia sp. NRRL WC-3656])

HSP 1 Score: 74.7 bits (182), Expect = 1.400e-9
Identity = 51/138 (36.96%), Postives = 73/138 (52.90%), Query Frame = 0
Query:   70 PYCAWRFISNFSSWNVAFPDSTSVYHVSLMHLNKGDEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPS-HPDAGPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFIVFFRIY 207
            P CAWRF+SN +  NVAFPD+ + Y V    L  GD I++S  S P ARYFS  TY   +F ++ ++RD  I P P S +P A P        A    ++  +  ++T   D G  NE+RAL   + +    +  R+Y
Sbjct:   27 PLCAWRFMSNSTVLNVAFPDANATYWVLPYALGPGDSIELSG-SYPAARYFSLNTYG-TNFDTADTLRDNQIAPDPGSANPFAAP-------TAAPDTQRRWHARLVTGAADHG-RNEIRALPAAQSAPIGFLIIRVY 154          
BLAST of NO12G01400 vs. NCBI_GenBank
Match: WP_067451526.1 (hypothetical protein [Nocardia alba])

HSP 1 Score: 74.7 bits (182), Expect = 1.400e-9
Identity = 53/164 (32.32%), Postives = 80/164 (48.78%), Query Frame = 0
Query:   44 KLAGLTAVLLLGAGYFRWRQGAIFNPPYCAWRFISNFSSWNVAFPDSTSVYHVSLMHLNKGDEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPDAGPNCYTNLSA-ATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFIVFFRIY 207
            +L  + A++    G+         +   CAWRF+SN +  NVAFPD+ S Y +    L  GD I++S  + P ARYFS  TY   D  +  ++RD  I+P P S      N Y + SA A    RQ  +  ++    D    NE++A+A  + +    V  R+Y
Sbjct:    6 RLGCVVAMISAAVGFAAPASAEPTDSTLCAWRFMSNSTVLNVAFPDANSTYWLMPYALGPGDSIELSG-TYPAARYFSLNTYG-TDLDTVDTLRDDQIIPDPGS-----ANPYVDASAEALPASRQRWHATLVNGPADHS-RNEIQAVASGQGTPIGFVIIRVY 161          
The following BLAST results are available for this feature:
BLAST of NO12G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25888.17.300e-20551.97hypothetical protein Naga_100054g2 [Nannochloropsi... [more]
EWM25889.14.800e-18051.04hypothetical protein Naga_100054g2 [Nannochloropsi... [more]
EWM27118.13.500e-9035.08hypothetical protein Naga_100046g25 [Nannochlorops... [more]
EWM24273.12.100e-5828.44protein of unknown function DUF1214 [Nannochlorops... [more]
EWM22223.12.600e-1625.64hypothetical protein Naga_100312g6 [Nannochloropsi... [more]
XP_005854425.12.200e-1223.53hypothetical protein NGA_0235800 [Nannochloropsis ... [more]
EWM21339.17.200e-1123.99hypothetical protein Naga_100075g21 [Nannochlorops... [more]
XP_005855631.12.100e-1024.14hypothetical protein NGA_0673800 [Nannochloropsis ... [more]
WP_030514284.11.400e-936.96hypothetical protein [Nocardia sp. NRRL WC-3656][more]
WP_067451526.11.400e-932.32hypothetical protein [Nocardia alba][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010063NSK010063Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01400.1NO12G01400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592050gene_5298Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100054g2gene4632Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01400.1NO12G01400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01400 ID=NO12G01400|Name=NO12G01400|organism=Nannochloropsis oceanica|type=gene|length=3648bp
AAGTGGCTGTTTGGGCCGCCTGTTTGTTTGGGGTATGGGGGAGGGTGAAG
GGGCGTAGGAGTGAGGAGGAGAACGGTTGATGCTTGATGATGATGATGAT
GTATGGGCGCGTGGATGCTTTAAGGCGGCGTCGGCTACCGTACGTGCTGA
CCCATATCGCGCGCAGGGCAAGGCTTGACTGTATGGTGTGCATGGTGTGG
GTGGAGTTATGGCCAAGGGGTCGAGCACTGAATGGAATCGAAGTCGGCGA
TCAAGCCTGAAGGTGATGGGGATGTTTGTCGCTCTCTTCTCTCCCGAGAC
GAGACGAGAGACTCCTCTGCCGACTCGAGTTGAGTTCAAACCCGTGACAC
GTGCTTATTTTTTCATCCTTAAAAGGCACGCCTCTGCAACCTTTTCGCAC
TGTGCAGGCACGGCAGAGTACACTGAAGGCTAGCCATCAAAGGAATTTTG
TGCTGAAGCCATCACTGTATGACGCTCAAAGAAGGAAAAAATGAAGGCAT
GTCAGCCGTCTCGGGGACGCGAGAGTTGCTTCTATGCATGACCCGCTCTC
CCACGCCCCCAAGCTTCCGGTTCGCATCCACGGCAAGCGCATACCACGCA
AGCGGACAGAAGTTTAAAGGTGATCCTATCCTGCCCTGAGGGAATGGCTA
CCGCCTTATGGTTTTTGAGCCAAATCGCCACATGAAACCTAGAATTGCCT
CGGCTCTAACCCCCATTGTTCCATACAAAACAGCCATGGCGCCTGCGGTA
TCGGCGTCGGCACCACCAAGGAAACGATGGAAATGGAAATTGGCTGGACT
GACCGCCGTGCTACTTCTTGGAGCTGGATACTTTCGCTGGCGGCAAGgta
atcgagaaaattgctaggaaggctaaggggcttggactctgtggtggtct
agttaaggaaattgacaagagctaaagcggcgctttgtggtcattgggct
ttgcaacaaatcttgcattcggttgatttcgtgcgtttctccgttttaat
aatttgacggactcgcacgggcatggctcatcccccatcccaaccatgca
cccacgtacagGGGCCATTTTTAACCCGCCATACTGTGCGTGGAGATTCA
TAAGgtaagccaactactgatgatgtatgctgattttattctcaaccccc
cacccaccccctttccccaaatcaccaacttcaattcacacaactcacaa
gCAATTTTTCCTCTTGGAACGTGGCCTTCCCTGACTCCACCTCCGTCTAC
CACGTCAGTCTGATGCACCTCAATAAAGGGGACGAGATTAAAGTCTCCTC
TCCTTCTCTCCCCTACGCTCGATACTTCTCCTTCCAAACTTATTCTATTC
CAGACTTTGTCTCCTCCGCCTCCATGCGGGACGTGGACATCCTCCCCCTC
CCTCCTTCCCACCCTGATGCCGGGCCTAACTGCTACACCAATCTCTCTGC
AGCGACAGCAGGCATACGACAAGGAGGATATGAAGTCATGATAACAGCAC
ATGGAGACCAGGGCTATCCTAATGAAATGCGCGCCCTAGCCGATGACCGT
GATTCAGGCTTCTTCATCGTCTTCTTCAGGATCTACCAAGACCGCGCCGA
TAGCCCTCCTTCGCTCCCTCCCTCGTCCTTTTCCGCCTTTCAAGACGGTC
TGAACAAGTGCTTCGGCCCCCAAGGACATTATCCAGAAGAAACACCGCAA
GAATGGGGATGGGCCTGCCCTCCTACTGTTGCACTTCGACGAGTTTTTCA
ATACGGATCAGGCGCATCCTTTGCGCCTTTGCCCATGTGTGGGTATCGAC
GCAAACATGGCATCGCCTACAATGACATAACGCCTCCTGTCATTTACTGT
GCATCAAATCGAGAACCGAACCGTCCGCACAACTTCTTCTTGCCATCCCC
ATTTTATTTGAAGCAGAAATTTGCGAACAAGGATGCGAAGTACTTGTTCT
CGTGCGCAGAAGCCCCGGGCGTTCCCGAGGGGACGAATGGGATGGGAGGG
TGGGTGTATCAGAGGGCGAAACAGGGAAAGACAGATAGAGGAAGAGAGGA
AGGGAGGGAGGAAGGGGAAGAGGAAGGGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAAATGGAGGGGAAGGAGGAGCCTGAGCTCTGGGCC
CGTGTGACGGGGAAGCTTCCTCGGACTGCAAATGGGTTGTACGCCCCGCC
TTTCATTGCGAATTTGTCCGATTACGATGTGCGGTACGTGTCCTTATCCT
CGGTGGGGCGAAGCTTGCCTTATCGAGGGTACCAGACTTTGCATGATGCC
GATATCACGGAGCATTATTTACGAGAAATAGGCCCCCAATGGCTTGAAGA
CCGAAAATTCACGCTCTGGTTCGGACCACCGCACGTCGAGGTGGAGAAAG
AAGGAACTTTCTCGTCTTCTTCCTCCTCGTCGCCCTCACCATTGCGCCCG
GCAGTGGTGGCGGATGAGAAGGCGTTGTTCTTGCCGTGGGGGAGGAGTTT
CGAAGGAGGACTCATCCCTTTCCCGGGAGTGCTGTACAGACAGATTCTGT
CACGAGGCCAGGTTTTGAAGTCGATGAGGGCGGGAGGTCGGACTGGAGGT
AGGACAAATAGTAGACAAAGCAGTGAAAAGAAAGGAGAGTCAGAGCGGAG
CTGTCCTTCGCATGCGGCTGTTACAAGTGTGGCTCCTGCCGCAGCAGGAG
CAGGAGCAGCGGCAACAGTGGCTGGTTCACCGACGGCAAGTCTTGCGGAG
ATTATTCCCCCGACATGTGAGAGGTGGGAAGAAGAAATAGAGAAAGAGGA
GGAGGACCAACCTTTGCATGTTGTAGGCAAGCATATGTGTTGCGGTTCCT
CGGCTCCGGAATGGTGTCATGATCCTGGTTTTGTGGCGAGCAAAATGAAA
AGTTTTTATCCCTTGGTTGAGTATTATCATCGGCACCCTAAGCGAGGGCG
AGGAAATAAAAAGGGCAAGGTGGACGAGGATGATGTGATGGAGAGGATTG
GTGGGGAGGATGACGATTGCCGAAAAATGACACTGGTGAAGGAAGAGGAG
TCGTTTCAGCCATCATGTGTTGAGAAAGAACAGGCGGAAATTAGTGGAAA
GGAAGAAAGGGAGGAAAGAGAGGTGTCGTTGTCGATGGAGGAGATGGCGG
GTTCGTATTTAAATTTAGTGAGTGACATTTGGACCATAATTTATTCATAC
ATACTCTTTTGGGGTAGTGAGAGAGGGCGGAGGTGATGAGGGGATATAAT
GTGATATAATTTCTCTGTTTCTTATTTTTGAAAGGAGACAAGAAATAAGG
GGCAGGAGGCCAAGAGCAATTGAAATGACATCTGTAAATAAGCTGTTTGT
GTGCATACACGCTTTCTACATGGGAATTAAGATATATGGTACAGAATACC
ACTCCAACTGGTTGGTGAGTAACGAAGGCGTGAAAGGAACAGAGTTCGAC
AAGATGAAAATCACCATGGTCATATTTACAATAACCTACGGTACTGACAT
GAAATATGTGAATCAAAAAATGAAGAAATCACATGCACGTAAAAGAAGGG
AAAAAATAGGCCAACCCGGCCACTTTAAGGTCAGTGTGTTTTGGGCAGCG
GCGGCGTAATATGCACTTTCCCGCCAATGAACCTGGCATTTTTGAAGA
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protein sequence of NO12G01400.1

>NO12G01400.1-protein ID=NO12G01400.1-protein|Name=NO12G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=756bp
MVFEPNRHMKPRIASALTPIVPYKTAMAPAVSASAPPRKRWKWKLAGLTA
VLLLGAGYFRWRQGAIFNPPYCAWRFISNFSSWNVAFPDSTSVYHVSLMH
LNKGDEIKVSSPSLPYARYFSFQTYSIPDFVSSASMRDVDILPLPPSHPD
AGPNCYTNLSAATAGIRQGGYEVMITAHGDQGYPNEMRALADDRDSGFFI
VFFRIYQDRADSPPSLPPSSFSAFQDGLNKCFGPQGHYPEETPQEWGWAC
PPTVALRRVFQYGSGASFAPLPMCGYRRKHGIAYNDITPPVIYCASNREP
NRPHNFFLPSPFYLKQKFANKDAKYLFSCAEAPGVPEGTNGMGGWVYQRA
KQGKTDRGREEGREEGEEEGEEEEEEEEEEEEEMEGKEEPELWARVTGKL
PRTANGLYAPPFIANLSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHY
LREIGPQWLEDRKFTLWFGPPHVEVEKEGTFSSSSSSSPSPLRPAVVADE
KALFLPWGRSFEGGLIPFPGVLYRQILSRGQVLKSMRAGGRTGGRTNSRQ
SSEKKGESERSCPSHAAVTSVAPAAAGAGAAATVAGSPTASLAEIIPPTC
ERWEEEIEKEEEDQPLHVVGKHMCCGSSAPEWCHDPGFVASKMKSFYPLV
EYYHRHPKRGRGNKKGKVDEDDVMERIGGEDDDCRKMTLVKEEESFQPSC
VEKEQAEISGKEEREEREVSLSMEEMAGSYLNLVSDIWTIIYSYILFWGS
ERGRR*
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Synonyms
Publications