Naga_100054g2, gene4632 (gene) Nannochloropsis gaditana

Overview
NameNaga_100054g2
Unique Namegene4632
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:380085..383048 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100054g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:380085..383048 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01400NO12G01400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4796rna4796-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4795rna4795-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4796rna4796Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4795rna4795Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4796

>rna4796-protein ID=rna4796-protein|Name=rna4796|organism=Nannochloropsis gaditana|type=polypeptide|length=643bp
MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGP
NCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFF
RIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKR
LSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFL
PSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEG
REREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGR
ELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQT
LHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKG
LFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAW
TGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEKQEGEGT
EPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYYLRRPPRDTRD
GLEAGGRDENGEALEIVDEEDEVEMERIGGGSEGARKMTLYDGQELGVLP
PCMTRGKCPHASGEGAKDSSQSGVDAVNSLFSIVGEMWTEMSP
back to top

protein sequence of rna4795

>rna4795-protein ID=rna4795-protein|Name=rna4795|organism=Nannochloropsis gaditana|type=polypeptide|length=717bp
MPKPPIPSQSNRRQWGSMEFTMVILAGLGATIFWGHWQKGAILNPPYCAW
RFVSNFASWNVAFPDSTSIYHVSLMYIRRGEEIKISSSSLPYARYFSFQS
YSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHG
DHGHANELRALADDRASGYFILFFRIYQDRVGSLPPMSELADDMGECFGP
RGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVY
NDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPW
VPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPS
EDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANF
SDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKL
WLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILS
QGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATG
SGAPIAGLAEIIPPTCEKQEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFV
ASKMRDFYPLVEYYLRRPPRDTRDGLEAGGRDENGEALEIVDEEDEVEME
RIGGGSEGARKMTLYDGQELGVLPPCMTRGKCPHASGEGAKDSSQSGVDA
VNSLFSIVGEMWTEMSP
back to top
Synonyms
Publications