NO12G00840, NO12G00840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00840 vs. NCBI_GenBank
Match: EWM25940.1 (uncharacterized protein Naga_100469g3 [Nannochloropsis gaditana]) HSP 1 Score: 280.0 bits (715), Expect = 6.900e-72 Identity = 160/233 (68.67%), Postives = 180/233 (77.25%), Query Frame = 0 Query: 14 MLARAVQVAVRCRGGAVAALRNGSIPAVVATAPIRCLASTPVTETDEYIIFPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQL----KGKKAGKEGGKEVKLLEAGDTVPFETFDAHLADVKATLEKATDLYVEDGSSKGGA-FNVRVIADSPAYALAAKALLEQAQTRSSSWPFTKSVVVYAAGGAKAFAGVMFSGGKAGEVTGATVALGGVPATAIKSAMSLVAEAMK 242 ML RA Q A+R R A L N +A+ P R L+ TPVTETDEY IFPRE PGLDYKLNWSLNGDDVTP GNAYRNLDA+ L KG KA + G K+LEAGD+VPFETFD HLADVKA LEKA+DLYVEDG+ KGG+ FN+RVI DS +YALAAKALL+Q++ S WPF K+V VYAAGGAK F GVMF+GGK G VTGATVA+GG PATAIK+AMSLVAE MK Sbjct: 1 MLVRAFQGALRRR----AVLHNLRASGALASIPSRTLSGTPVTETDEYTIFPREGPGLDYKLNWSLNGDDVTPGGNAYRNLDAAALQQGAKGDKAPRSGAD--KVLEAGDSVPFETFDLHLADVKAALEKASDLYVEDGAVKGGSNFNIRVITDSASYALAAKALLDQSKV--SGWPFEKAVNVYAAGGAKPFVGVMFAGGKEGNVTGATVAVGGAPATAIKNAMSLVAEGMK 225
BLAST of NO12G00840 vs. NCBI_GenBank
Match: XP_005856028.1 (hypothetical protein NGA_0514700 [Nannochloropsis gaditana CCMP526] >EKU20321.1 hypothetical protein NGA_0514700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 265.0 bits (676), Expect = 2.300e-67 Identity = 160/261 (61.30%), Postives = 180/261 (68.97%), Query Frame = 0 Query: 14 MLARAVQVAVRCRGGAVAALRNGSIPAVVATAPIRCLASTPVTETDEYIIFPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQL----KGKKAGKEGGKEVKLLEAGDTVPFETFDAHLADVKATL----------------------------EKATDLYVEDGSSKGGA-FNVRVIADSPAYALAAKALLEQAQTRSSSWPFTKSVVVYAAGGAKAFAGVMFSGGKAGEVTGATVALGGVPATAIKSAMSLVAEAMK 242 ML RA Q A+R R A L N +A+ P R L+ TPVTETDEY IFPRE PGLDYKLNWSLNGDDVTP GNAYRNLDA+ L KG KA + G K+LEAGD+VPFETFD HLADVKA L EKA+DLYVEDG+ KGG+ FN+RVI DS +YALAAKALL+Q++ S WPF K+V VYAAGGAK F GVMF+GGK G VTGATVA+GG PATAIK+AMSLVAE MK Sbjct: 1 MLVRAFQGALRRR----AVLHNLRASGALASIPSRTLSGTPVTETDEYTIFPREGPGLDYKLNWSLNGDDVTPGGNAYRNLDAAALQQGAKGDKAPRSGAD--KVLEAGDSVPFETFDLHLADVKAALELRGSGTPPLMPCPLLLLACWPYTHQLKEKASDLYVEDGAVKGGSNFNIRVITDSASYALAAKALLDQSKV--SGWPFEKAVNVYAAGGAKPFVGVMFAGGKEGNVTGATVAVGGAPATAIKNAMSLVAEGMK 253
BLAST of NO12G00840 vs. NCBI_GenBank
Match: XP_024572098.1 (hypothetical protein PHYSODRAFT_348042 [Plasmopara halstedii] >CEG35729.1 hypothetical protein PHYSODRAFT_348042 [Plasmopara halstedii]) HSP 1 Score: 85.1 bits (209), Expect = 3.200e-13 Identity = 57/146 (39.04%), Postives = 80/146 (54.79%), Query Frame = 0 Query: 59 DEYII-FPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQLKG-KKAGKEGGKEVKLLEAGDTVPFETFDAHLADVKATLEKATDLYVED---GSSKGGAFNVRVIADSPAYALAAKALLEQAQTRSSSWPFTKSVVVYAAGGAK 200 D++++ FP E GL+ + NWSL GDDVTP G+A+RNL S+L+ K K GK VK+ E + F TF+ V L +L+ +D GS K VRVI+DSP AL A+ LL + + + +VVY A G + Sbjct: 31 DKFVVDFPEEHEGLNIEFNWSLAGDDVTPHGDAFRNLSWSKLEELAKHEKPAGKSVKIEEVDVNIVFNTFEGLYEKVTEHLSTEPNLFTQDGAVGSFKDDRTRVRVISDSPLVALFAQNLLVRVPIKDPH--AARPIVVYVATGGE 174
BLAST of NO12G00840 vs. NCBI_GenBank
Match: OWZ13238.1 (hypothetical protein PHMEG_00013471, partial [Phytophthora megakarya]) HSP 1 Score: 80.9 bits (198), Expect = 6.100e-12 Identity = 53/145 (36.55%), Postives = 75/145 (51.72%), Query Frame = 0 Query: 59 DEYII-FPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQLKGKKAGKEGGKEVKLLEAGDTVPFETFDAHLADVKATLEKATDLYVED---GSSKGGAFNVRVIADSPAYALAAKALLEQAQTRSSSWPFTKSVVVYAAGGAK 200 D++++ FP E GL+ + NWSL DDVTP G+A+RNL +L K GK V + E + F F+ V L LY +D GS K VRVI+DSP AL A++LL + + + + +VVY A G + Sbjct: 31 DKFVVEFPEEHEGLNIEFNWSLADDDVTPHGDAFRNLSWPKLAELVKEKPAGKNVAIQEVDVNIVFNDFEGLYEQVTEHLSTEPSLYTQDGAVGSYKDDRTRVRVISDSPLVALFAQSLLVRVPIKDAH--AARPIVVYVATGGE 173
BLAST of NO12G00840 vs. NCBI_GenBank
Match: XP_009535858.1 (hypothetical protein PHYSODRAFT_348042 [Phytophthora sojae] >EGZ09225.1 hypothetical protein PHYSODRAFT_348042 [Phytophthora sojae]) HSP 1 Score: 79.7 bits (195), Expect = 1.400e-11 Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 0 Query: 59 DEYII-FPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQL-KGKKAGKEGGKEVKLLEAGDTVPFETFDAHLADVKATLEKATDLYVED---GSSKGGAFNVRVIADSPAYALAAKALLEQAQTRSSSWPFTKSVVVYAAGGAK 200 D++++ FP E GL+ + NWSL DDVTP G+A+RN+ +L + K K GK+V + E ++ F FD V L +LY +D GS K VRVI+DSP AL A++LL + + + +VVY A G + Sbjct: 31 DKFVVEFPEEHEGLNIEFNWSLADDDVTPHGDAFRNMSWPKLAELAKQEKPAGKKVAIEEVDVSIVFNDFDGLYEKVTDHLSTEANLYTQDGAVGSFKDDRTRVRVISDSPLVALFAQSLLVRVPIKDPH--AARPIVVYVATGGE 174
BLAST of NO12G00840 vs. NCBI_GenBank
Match: ETK81104.1 (hypothetical protein L915_13364, partial [Phytophthora parasitica]) HSP 1 Score: 78.6 bits (192), Expect = 3.000e-11 Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 0 Query: 59 DEYII-FPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQL-KGKKAGKEGGKEVKLLEAGDTVPFETFDAHLADVKATLEKATDLYVED---GSSKGGAFNVRVIADSPAYALAAKALLEQAQTRSSSWPFTKSVVVYAAGGAK 200 D++++ FP+E GL+ + NWSL DDVTP G+A+RNL +L + K K GK+V + E ++ F F+ V L LY +D GS K VRVI+DSP AL A++LL + + + +VVY A G + Sbjct: 31 DKFVVEFPQEHEGLNIEFNWSLADDDVTPHGDAFRNLSWPKLAELAKQQKPAGKKVAIEEVDVSIVFNDFEGLYEKVTEHLSTEPSLYTQDGAVGSFKDDRTRVRVISDSPLVALFAQSLLVRVPIKDVH--AARPIVVYVATGGE 174
BLAST of NO12G00840 vs. NCBI_GenBank
Match: PNR37393.1 (hypothetical protein PHYPA_020502 [Physcomitrella patens]) HSP 1 Score: 75.9 bits (185), Expect = 2.000e-10 Identity = 53/145 (36.55%), Postives = 73/145 (50.34%), Query Frame = 0 Query: 56 TETDEYIIFPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQLKGKKAG-KEGGKEVKLLEAGDTVPFET------FDAHLADVKATLEKATDLYVED---GSSKGGAFNVRVIADSPAYALAAKALLEQAQTR---SSSWPFT 188 T ++ IIFPRE PG++Y LNW+L + P G AYRNL S+LK A + K+ G T F+ +V A L + +YV D GSS VR I+D+P+ AL +++LE TR S +PFT Sbjct: 40 TGQNQQIIFPREGPGVNYALNWALCAKGIAPKGEAYRNLRGSELKKLNASIPKPSSTTKVYARGSYTAGATDISKAQFNRLFKEVTAFLANSQKIYVHDGAVGSSPLSDAKVRTISDNPSSALLFRSILEPVPTRQVSSQVFPFT 184
BLAST of NO12G00840 vs. NCBI_GenBank
Match: XP_024399306.1 (uncharacterized protein LOC112293744 isoform X2 [Physcomitrella patens]) HSP 1 Score: 75.9 bits (185), Expect = 2.000e-10 Identity = 53/145 (36.55%), Postives = 73/145 (50.34%), Query Frame = 0 Query: 56 TETDEYIIFPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQLKGKKAG-KEGGKEVKLLEAGDTVPFET------FDAHLADVKATLEKATDLYVED---GSSKGGAFNVRVIADSPAYALAAKALLEQAQTR---SSSWPFT 188 T ++ IIFPRE PG++Y LNW+L + P G AYRNL S+LK A + K+ G T F+ +V A L + +YV D GSS VR I+D+P+ AL +++LE TR S +PFT Sbjct: 40 TGQNQQIIFPREGPGVNYALNWALCAKGIAPKGEAYRNLRGSELKKLNASIPKPSSTTKVYARGSYTAGATDISKAQFNRLFKEVTAFLANSQKIYVHDGAVGSSPLSDAKVRTISDNPSSALLFRSILEPVPTRQVSSQVFPFT 184
BLAST of NO12G00840 vs. NCBI_GenBank
Match: XP_024399305.1 (uncharacterized protein LOC112293744 isoform X1 [Physcomitrella patens]) HSP 1 Score: 75.9 bits (185), Expect = 2.000e-10 Identity = 53/145 (36.55%), Postives = 73/145 (50.34%), Query Frame = 0 Query: 56 TETDEYIIFPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQLKGKKAG-KEGGKEVKLLEAGDTVPFET------FDAHLADVKATLEKATDLYVED---GSSKGGAFNVRVIADSPAYALAAKALLEQAQTR---SSSWPFT 188 T ++ IIFPRE PG++Y LNW+L + P G AYRNL S+LK A + K+ G T F+ +V A L + +YV D GSS VR I+D+P+ AL +++LE TR S +PFT Sbjct: 40 TGQNQQIIFPREGPGVNYALNWALCAKGIAPKGEAYRNLRGSELKKLNASIPKPSSTTKVYARGSYTAGATDISKAQFNRLFKEVTAFLANSQKIYVHDGAVGSSPLSDAKVRTISDNPSSALLFRSILEPVPTRQVSSQVFPFT 184
BLAST of NO12G00840 vs. NCBI_GenBank
Match: POM78581.1 (Nucleotide binding protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 74.3 bits (181), Expect = 5.700e-10 Identity = 60/192 (31.25%), Postives = 93/192 (48.44%), Query Frame = 0 Query: 59 DEYII-FPREAPGLDYKLNWSLNGDDVTPAGNAYRNLDASQLKG-KKAGKEGGKEVKLLEAGDTVPFETFDAHLADVKATLEKATDLYVED---GSSKGGAFNVRVIADSPAYALAAKALLEQAQTRSSSWPFTKSVVVYAAGGA-----KAFAGVMFSGGKAGEVTGATVALGGVPATAIKSAMSLVAEAM 241 D++++ FP+E GL+ + NWSL DDVTP G+A+RNL +L+ K K GK+V + E ++ F F+ V L LY +D GS K VRVI+DSP AL ++LL + + + + +VVY A G + A ++ G V G ++K A+ L + + Sbjct: 31 DKFVVEFPQEHEGLNIEFNWSLADDDVTPHGDAFRNLSWPKLEELAKQEKPAGKKVAIEEVDVSIVFNDFEGLYEKVTEHLSTEPSLYTQDGAVGSFKDDRTRVRVISDSPLVALFTQSLLVRVPIKDAH--AARPIVVYVATGGEFKGKEPQAQLLVDNDDEGATFVKVVITGAADLASVKDAVGLAKKKL 220 The following BLAST results are available for this feature:
BLAST of NO12G00840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00840 ID=NO12G00840|Name=NO12G00840|organism=Nannochloropsis oceanica|type=gene|length=1726bpback to top protein sequence of NO12G00840.1 >NO12G00840.1-protein ID=NO12G00840.1-protein|Name=NO12G00840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=243bpback to top Synonyms
Publications
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