NO12G00650, NO12G00650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00650 vs. NCBI_GenBank
Match: EQA46387.1 (CobW/P47K family protein [Leptospira broomii serovar Hurstbridge str. 5399]) HSP 1 Score: 142.9 bits (359), Expect = 2.400e-30 Identity = 104/294 (35.37%), Postives = 135/294 (45.92%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGP-----SPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQGNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPEDEEGKEDVRVDFWEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 R + D+L QVE ANVL++N+ DL+ S L L SIL LNP A + EG+ P + FD + GWL+ L + ++ V VYRAR+PFHP R WD L + V+RSKGFFWLATR +G WSQ G + G WW TA+SEWPE E KE + W+E GD+RQE+ LIGV + + + LD CL+TEEE+ G GWE+ DPFP+W Sbjct: 171 RAIVDLLIEQVEFANVLLINKIDLV-----------SQKELIGLTSILKRLNPDALIVP------------------IQEGEVDPKLILNTGRFDFLKAAEAPGWLKELRGEH------------LPETEEFGVSSFVYRARKPFHPHRFWDILQEEWPG----VIRSKGFFWLATRPDWVGGWSQAGGACRTENAGLWWAATARSEWPEAESEKEILAQ--WQEP-------YGDRRQEIVLIGVDMDHEE-----IASLLDGCLVTEEEFSYG--PSGWES---FSDPFPDW 400
BLAST of NO12G00650 vs. NCBI_GenBank
Match: WP_040911089.1 (GTP-binding protein [Leptospira broomii]) HSP 1 Score: 142.9 bits (359), Expect = 2.400e-30 Identity = 104/294 (35.37%), Postives = 135/294 (45.92%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGP-----SPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQGNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPEDEEGKEDVRVDFWEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 R + D+L QVE ANVL++N+ DL+ S L L SIL LNP A + EG+ P + FD + GWL+ L + ++ V VYRAR+PFHP R WD L + V+RSKGFFWLATR +G WSQ G + G WW TA+SEWPE E KE + W+E GD+RQE+ LIGV + + + LD CL+TEEE+ G GWE+ DPFP+W Sbjct: 167 RAIVDLLIEQVEFANVLLINKIDLV-----------SQKELIGLTSILKRLNPDALIVP------------------IQEGEVDPKLILNTGRFDFLKAAEAPGWLKELRGEH------------LPETEEFGVSSFVYRARKPFHPHRFWDILQEEWPG----VIRSKGFFWLATRPDWVGGWSQAGGACRTENAGLWWAATARSEWPEAESEKEILAQ--WQEP-------YGDRRQEIVLIGVDMDHEE-----IASLLDGCLVTEEEFSYG--PSGWES---FSDPFPDW 396
BLAST of NO12G00650 vs. NCBI_GenBank
Match: WP_010409687.1 (GTP-binding protein [Leptospira inadai] >EQA35920.1 CobW/P47K family protein [Leptospira inadai serovar Lyme str. 10] >PNV76885.1 hypothetical protein BES34_000995 [Leptospira inadai serovar Lyme]) HSP 1 Score: 139.8 bits (351), Expect = 2.100e-29 Identity = 104/294 (35.37%), Postives = 133/294 (45.24%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGP-----SPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQGNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPEDEEGKEDVRVDFWEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 RT+ D+L QVE ANVL++N+ DL+ S L L SIL LNP A V EG P + FD + GWL+ L + ++ V VYRARRPFHP R WD L + V+RSKGFFWLATR +G WSQ G + G WW T +SEWPE + KE + W+E GD+RQE+ LIGV + + + LD CL+T EE+ G GWE+ DPFP+W Sbjct: 167 RTIVDLLIEQVEFANVLLINKTDLV-----------SQEELLNLASILKRLNPDALIIP------------------VREGKVDPKLILNTGRFDFLKAAEAPGWLKELRGEH------------LPETEEFGVSSFVYRARRPFHPHRFWDILQEEWPG----VIRSKGFFWLATRPDWVGGWSQAGGACRTENAGLWWAATPRSEWPEKDAEKE--ILSQWQEP-------YGDRRQEIVLIGVDMDHEE-----ITSLLDGCLVTAEEFSYG--PSGWES---FSDPFPDW 396
BLAST of NO12G00650 vs. NCBI_GenBank
Match: OYT70015.1 (hypothetical protein CFK52_12240 [Chloracidobacterium sp. CP2_5A]) HSP 1 Score: 137.9 bits (346), Expect = 7.800e-29 Identity = 100/290 (34.48%), Postives = 128/290 (44.14%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGPSPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQ-GNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPEDEEGKEDVRVDFWEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 RTV+D+L QVE A+V+++N+ DL+ S L L+ +L LNP A P G G F AGWL+ L + + YR RRPFHP RLW +L + G D R VLRSKGFFWLATR +G+WSQ G S GG WW + EWP DE + ++R F G GD+RQE+ IG + RD ++ ALD CL+TE E R G A + DPF W Sbjct: 168 RTVADLLIEQVEFADVIIVNKVDLV-----------SAEELAELQGVLRRLNPEARLMTCRLGEV---------PLTEVLGTG----RFSFERASQSAGWLKELRGEHVPETETYG------------ISSFAYRRRRPFHPNRLWAFLHGETGGDEWRGVLRSKGFFWLATRMNAVGVWSQAGGSCRIEPGGSWWATQPEEEWPGDEALRNEIRSQF--------DGLFGDRRQELVFIGDRRMRRDAIE----AALDNCLLTEAEARR-----GLNAWAMLPDPFGSW 404
BLAST of NO12G00650 vs. NCBI_GenBank
Match: WP_090535057.1 (GTP-binding protein [Paraburkholderia sartisoli] >SEB01600.1 GTPase, G3E family [Paraburkholderia sartisoli]) HSP 1 Score: 137.1 bits (344), Expect = 1.300e-28 Identity = 103/290 (35.52%), Postives = 140/290 (48.28%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGPSPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQGNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPE-DEEGKEDVRVDFWEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 RTV ++L QVE +VLV+N+ DL+ S +L L+ IL+ +NP A H A + D + HFD AGWL L +D D V VYRARRPFHP+RLW L ++ + VLRSKGFFWLATR + G SQ G + P G WW +SEWPE D+E +++ D++ + + +GD+RQE+ +IGV + D R LDACL+T +E+ G W+A DPFP W Sbjct: 163 RTVVELLVDQVEFCDVLVVNKPDLV-----------SDEALARLQRILTRINPGAVQIVS-------------HYADIAPADVLDTRHFDFDATSGSAGWLVTLTEDH--------DPEPHVHADDAGVSTFVYRARRPFHPERLWALL----HEEWKGVLRSKGFFWLATRNEIGGTLSQAGGTCRPAPAGTWWAAQDRSEWPEGDDELMDEIAADWYGDASDFS---IGDRRQELVMIGVDI---DAPAWR--AKLDACLLTGDEYASGPE--AWKAFA---DPFPAW 403
BLAST of NO12G00650 vs. NCBI_GenBank
Match: KYF76154.1 (hypothetical protein BE11_49605 [Sorangium cellulosum]) HSP 1 Score: 135.6 bits (340), Expect = 3.900e-28 Identity = 100/292 (34.25%), Postives = 131/292 (44.86%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGPSPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQGNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPEDEEGKEDVRVDF---WEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 RTV+D+L QVE ANVLVLN+ DL+ +E L ++L HLNP A +G G FD E GW++ L + ++ + VYRA RP HP+RLW +L G VLRSKGFFWLATR G WSQ G + S GRW+ + +WPEDEE + + + W GD+RQE+ IGV D + + LDACL+T++E G GW +DDPFP W Sbjct: 166 RTVADLLVEQVEFANVLVLNKTDLVGE-----------DEVERLTAMLLHLNPGARVIRACRGQVDPREI-------LGTG------RFDFEEAVRSPGWMRELRGEH------------VPETEEYGIESFVYRADRPMHPERLWAFL--HGATAWDGVLRSKGFFWLATRMDTTGAWSQAGGAASFEAAGRWYAALPEEQWPEDEEERGALDAAWHPVW-----------GDRRQEIVFIGV-----DMARDELTRGLDACLLTQDEMAAG--PSGWSR---LDDPFPAW 398
BLAST of NO12G00650 vs. NCBI_GenBank
Match: WP_031360951.1 (GTP-binding protein [Caballeronia sordidicola]) HSP 1 Score: 132.5 bits (332), Expect = 3.300e-27 Identity = 98/290 (33.79%), Postives = 133/290 (45.86%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGPSPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQGNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPE-DEEGKEDVRVDFWEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 RTV +VL Q+E +V+V+N+ DL+ + +L L IL LNP A H V D + FD S GWL +LN D D + VYRARRPFHP+RLW + + VLR KGFFWLATR G SQ G + G WW +SEWP D E + ++ D++ + ++ +GD+RQE+A+IG G D+ R A ACL+T+EEW++ GG+ DPFP W Sbjct: 125 RTVVEVLIAQIEFCDVIVINKTDLVDT-----------DTLAKLRRILHALNPRA-------------ELIDAHQGAVPASDLVNTDRFDFDATSSAPGWLAMLNAD----------PDALPESADSDIGGFVYRARRPFHPERLWALVHQEWPG----VLRCKGFFWLATRSDIGGSLSQAGGALRHGPAGMWWAAQERSEWPTGDAELEAEIAADWYGDADD---MAIGDRRQELAMIGT---GLDESHWR--AAFGACLVTDEEWKQASE-------GGLADPFPSW 361
BLAST of NO12G00650 vs. NCBI_GenBank
Match: WP_061610489.1 (GTP-binding protein [Sorangium cellulosum] >KYF66484.1 hypothetical protein BE15_26565 [Sorangium cellulosum]) HSP 1 Score: 132.5 bits (332), Expect = 3.300e-27 Identity = 101/292 (34.59%), Postives = 131/292 (44.86%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGPSPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQGNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPEDEEGKEDVRVDF---WEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 RTV+D+L QVE ANVLVLN+ DL+ S +E L ++L HLNP A +G G FD E GW++ L + ++ + VYRA RP HP+RLW +L G VLRSKGFFWLATR G WSQ G + S GRW+ + + PEDEE + + + W GD+RQE+ IGV D + + LDACL+T+EE G GW +DDPFP W Sbjct: 166 RTVADLLVEQVEFANVLVLNKTDLV-----------SEDEVERLRAMLLHLNPGARVIRACRGQVDPREI-------LGTG------RFDHEEAARSPGWMRELRGEH------------VPETEEYGIESFVYRADRPMHPERLWAFL--HGATAWDGVLRSKGFFWLATRMDTTGAWSQAGGAASFEAAGRWYAALPEEQRPEDEEERAALDAAWNPVW-----------GDRRQEIVFIGV-----DMARDELTRGLDACLLTQEEMAAG--PSGWSR---LDDPFPAW 398
BLAST of NO12G00650 vs. NCBI_GenBank
Match: WP_075322302.1 (GTP-binding protein [Acidithiobacillus albertensis]) HSP 1 Score: 132.1 bits (331), Expect = 4.300e-27 Identity = 92/289 (31.83%), Postives = 128/289 (44.29%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGPSPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQGNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPEDEEGKEDVRVDFWEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 RT++D+L Q+E NVLVLN+ DL+ S ++L +IL+ LNP A + FD E GWL + + + + + ARRPFHPQR WD + + VLRSKGFFWLA+R G+WSQ G F + G+WW T + WP+D E ++ + F G GD+RQE+ IG + D+ K R +L CL+T+ EW++G A G DPFPEW Sbjct: 169 RTITDLLIEQIEFCNVLVLNKVDLISS-----------EEQQSLMAILNALNPRARIEISEFGRVPVSRVL-------------QTGLFDFEEASQAPGWLMEMRGEH------------IPESTEYGIGSFHFAARRPFHPQRFWDLMHQNWDS----VLRSKGFFWLASRPDVAGLWSQAGGIFRHQAAGQWWAATPKKYWPKDPEERQAIEKHF--------QGEWGDRRQELVFIGQNM---DEDKIR--QSLSDCLLTDAEWQQGP-----SAWNGFVDPFPEW 399
BLAST of NO12G00650 vs. NCBI_GenBank
Match: WP_013937833.1 (GTP-binding protein [Myxococcus fulvus] >AEI64677.1 CobW/P47K family protein [Myxococcus fulvus HW-1]) HSP 1 Score: 131.7 bits (330), Expect = 5.600e-27 Identity = 97/289 (33.56%), Postives = 132/289 (45.67%), Query Frame = 0 Query: 163 RTVSDVLCGQVECANVLVLNRWDLLPSLPPPPSLPPSLHSLEALESILSHLNPSAXXXXXXXXXXXXXXXXXLHPAWVGEGDGGPSPHFDIYEGESGAGWLQLLNQDRKEGXXXXXXXXXXXXXKDPLVWQHVYRARRPFHPQRLWDYLTSQGNDMERYVLRSKGFFWLATRGKEMGIWSQVGSSFSPRGGGRWWCETAQSEWPEDEEGKEDVRVDFWEEEEEGEGGRVGDKRQEVALIGVKVGGRDDVKTRVVGALDACLMTEEEWREGGREGGWEAVGGMDDPFPEW 452 RTV D+L QVE A+VLVLN+ DL+P+ +L L IL LNP A + FD GWL+ L + + V+R+R PFHP RLWD++ ++ + VLRSKGFFWLATR G+W+Q G + S GG WW ++EWPED + + D+ E E EG GD+RQE+ I +D + L+ACL+T EE G ++ W G++DPFPEW Sbjct: 170 RTVVDLLVEQVEFADVLVLNKTDLVPA-----------DALARLRDILRKLNPEAHLVTAERGRVPLSTVLN-------------TGRFDFERARRSPGWLKELRGEHTPETEAYG------------IRSFVFRSRVPFHPARLWDFI----HESWQGVLRSKGFFWLATRRDIAGVWAQAGGACSFEPGGIWWDAMPRAEWPEDAQARADI-------ERECEGPH-GDRRQEIVFI-----TQDADHEELARLLEACLLTPEELARGPQQ--WT---GLEDPFPEW 400 The following BLAST results are available for this feature:
BLAST of NO12G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00650 ID=NO12G00650|Name=NO12G00650|organism=Nannochloropsis oceanica|type=gene|length=1971bpback to top protein sequence of NO12G00650.1 >NO12G00650.1-protein ID=NO12G00650.1-protein|Name=NO12G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=452bpback to top Synonyms
Publications
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