NO12G00140, NO12G00140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00140 vs. NCBI_GenBank
Match: OWY99845.1 (hypothetical protein PHMEG_00029080 [Phytophthora megakarya]) HSP 1 Score: 74.3 bits (181), Expect = 5.000e-10 Identity = 51/163 (31.29%), Postives = 78/163 (47.85%), Query Frame = 0 Query: 4 KEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHL-RLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACLRN---------LTPAGPKL--------NKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 KEH L E+ + +A+ C+LH+ILF RAP VRP E C ++YA +VD V S +A L +TP G + N G +++TF+ER+ ++ F L+ NEE+ VFE+W++P + T+SP +S Sbjct: 28 KEHLLDEVPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCHAFPNVTYA------------LCAVGDVSRKVDHAVRSFEEAVLAGGSYLMGSSMMTPYGQPVNSVNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWILPVTV----TSSPAAS 174
BLAST of NO12G00140 vs. NCBI_GenBank
Match: XP_002897633.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY64903.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 71.6 bits (174), Expect = 3.300e-9 Identity = 51/170 (30.00%), Postives = 78/170 (45.88%), Query Frame = 0 Query: 4 KEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHL-RLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACL-----------RNLTPAGPK-------------LNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 KEH L E+ + +A+ C+LH+ILF RAP VRP E C ++YA +VD V S +A + + PA + N G +++TF+ER+ ++ F L+ NEE+ VFE+W+IPF + T+SP +S Sbjct: 123 KEHRLDEIPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCHAFPNITYA------------LCAVGDVSRKVDHAVRSFEEAAVLGGSSYVMGTSNGMMPAYGQPPNKSLGTSNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWIIPFTV----TSSPAAS 276
BLAST of NO12G00140 vs. NCBI_GenBank
Match: OQR81902.1 (hypothetical protein THRCLA_23279 [Thraustotheca clavata]) HSP 1 Score: 71.6 bits (174), Expect = 3.300e-9 Identity = 39/133 (29.32%), Postives = 64/133 (48.12%), Query Frame = 0 Query: 6 HTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAI-DACLRNLTPAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLI 138 H L EL + + + C+LHSILF R+P V P + HC+ ++YA V + VD+AI RN+ + + G + + FYE R+ + F + E+R+VFE+W++P + Sbjct: 7 HELEELRVGVSELSDCVSCLLHSILFTRSPGPVHPADAHCRFRPITYA------------------FVPEVKKQVDTAILQFQQRNMRRQTNQRSSGTITVVFYETRKKTAMFNFMATEDRIVFEKWIVPIRV 121
BLAST of NO12G00140 vs. NCBI_GenBank
Match: POM60664.1 (hypothetical protein PHPALM_30459 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 71.6 bits (174), Expect = 3.300e-9 Identity = 49/169 (28.99%), Postives = 80/169 (47.34%), Query Frame = 0 Query: 4 KEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHL-RLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACL-------------RNLTPAGPKL----------NKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 KEH L E+ + +A+ C+LH+ILF RAP VRP E C+ ++YA +VD V S ++ + ++TP G + N G +++TF+ER+ ++ F L+ NEE+ VFE+W++P + T+SP +S Sbjct: 28 KEHLLDEIPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCQAFPNITYA------------LCAVGDVSRKVDHAVRSFEESVVLGGSIAGSSYLMGSSMTPYGQPVSMGTSNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWILPVTV----TSSPAAS 180
BLAST of NO12G00140 vs. NCBI_GenBank
Match: POM64315.1 (hypothetical protein PHPALM_20177 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 71.6 bits (174), Expect = 3.300e-9 Identity = 49/169 (28.99%), Postives = 80/169 (47.34%), Query Frame = 0 Query: 4 KEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHL-RLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACL-------------RNLTPAGPKL----------NKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 KEH L E+ + +A+ C+LH+ILF RAP VRP E C+ ++YA +VD V S ++ + ++TP G + N G +++TF+ER+ ++ F L+ NEE+ VFE+W++P + T+SP +S Sbjct: 28 KEHLLDEIPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCQAFPNITYA------------LCAVGDVSRKVDHAVRSFEESVVLGGSIAGSSYLMGSSMTPYGQPVTMGTSNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWILPVTV----TSSPAAS 180
BLAST of NO12G00140 vs. NCBI_GenBank
Match: ETI32880.1 (hypothetical protein F443_20387 [Phytophthora parasitica P1569]) HSP 1 Score: 70.1 bits (170), Expect = 9.500e-9 Identity = 50/169 (29.59%), Postives = 78/169 (46.15%), Query Frame = 0 Query: 4 KEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHL-RLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACL-----------RNLTPAGPK------------LNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 KEH L E+ + +A+ C+LH+ILF RAP VRP E C+ ++YA +VD V S +A + + PA + N G +++TF+ER+ ++ F L+ NEE+ VFE+W+IP + T+SP +S Sbjct: 28 KEHLLDEIPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCQAFPNITYA------------LCAVGDVSRKVDHAVRSFEEAAVLGGSSYVMGTSSGMVPAYGQPSKAFGTSNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWIIPVTV----TSSPAAS 180
BLAST of NO12G00140 vs. NCBI_GenBank
Match: ETK73219.1 (hypothetical protein L915_19823 [Phytophthora parasitica] >ETL26659.1 hypothetical protein L916_19704 [Phytophthora parasitica] >ETM33128.1 hypothetical protein L914_19600 [Phytophthora parasitica] >ETO61620.1 hypothetical protein F444_20392 [Phytophthora parasitica P1976] >ETP02677.1 hypothetical protein F441_20269 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 70.1 bits (170), Expect = 9.500e-9 Identity = 50/169 (29.59%), Postives = 78/169 (46.15%), Query Frame = 0 Query: 4 KEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHL-RLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACL-----------RNLTPAGPK------------LNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 KEH L E+ + +A+ C+LH+ILF RAP VRP E C+ ++YA +VD V S +A + + PA + N G +++TF+ER+ ++ F L+ NEE+ VFE+W+IP + T+SP +S Sbjct: 28 KEHLLDEIPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCQAFPNITYA------------LCAVGDVSRKVDHAVRSFEEAAVLGGSSYVMGTSSGMVPAYGQPSKAFGTSNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWIIPVTV----TSSPAAS 180
BLAST of NO12G00140 vs. NCBI_GenBank
Match: XP_008897684.1 (hypothetical protein PPTG_05717 [Phytophthora parasitica INRA-310] >ETL79887.1 hypothetical protein L917_19560 [Phytophthora parasitica] >ETN16530.1 hypothetical protein PPTG_05717 [Phytophthora parasitica INRA-310]) HSP 1 Score: 70.1 bits (170), Expect = 9.500e-9 Identity = 50/169 (29.59%), Postives = 78/169 (46.15%), Query Frame = 0 Query: 4 KEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHL-RLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACL-----------RNLTPAGPK------------LNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 KEH L E+ + +A+ C+LH+ILF RAP VRP E C+ ++YA +VD V S +A + + PA + N G +++TF+ER+ ++ F L+ NEE+ VFE+W+IP + T+SP +S Sbjct: 28 KEHLLDEIPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCQAFPNITYA------------LCAVGDVSRKVDHAVRSFEEAAVLGGSSYVMGTSSGMVPAYGQPSKAFGTSNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWIIPVTV----TSSPAAS 180
BLAST of NO12G00140 vs. NCBI_GenBank
Match: KUF78318.1 (hypothetical protein AM587_10003848 [Phytophthora nicotianae]) HSP 1 Score: 70.1 bits (170), Expect = 9.500e-9 Identity = 50/169 (29.59%), Postives = 78/169 (46.15%), Query Frame = 0 Query: 4 KEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHL-RLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACL-----------RNLTPAGPK------------LNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 KEH L E+ + +A+ C+LH+ILF RAP VRP E C+ ++YA +VD V S +A + + PA + N G +++TF+ER+ ++ F L+ NEE+ VFE+W+IP + T+SP +S Sbjct: 28 KEHLLDEIPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCQAFPNITYA------------LCAVGDVSRKVDHAVRSFEEAAVLGGSSYVMGTSSGMVPAYGQPSKAFGTSNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWIIPVTV----TSSPAAS 180
BLAST of NO12G00140 vs. NCBI_GenBank
Match: KUF91832.1 (Sorting nexin mvp1 [Phytophthora nicotianae]) HSP 1 Score: 70.1 bits (170), Expect = 9.500e-9 Identity = 50/169 (29.59%), Postives = 78/169 (46.15%), Query Frame = 0 Query: 4 KEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHL-RLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACL-----------RNLTPAGPK------------LNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 KEH L E+ + +A+ C+LH+ILF RAP VRP E C+ ++YA +VD V S +A + + PA + N G +++TF+ER+ ++ F L+ NEE+ VFE+W+IP + T+SP +S Sbjct: 28 KEHLLDEIPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCQAFPNITYA------------LCAVGDVSRKVDHAVRSFEEAAVLGGSSYVMGTSSGMVPAYGQPSKAFGTSNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWIIPVTV----TSSPAAS 180 The following BLAST results are available for this feature:
BLAST of NO12G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00140 ID=NO12G00140|Name=NO12G00140|organism=Nannochloropsis oceanica|type=gene|length=3921bpback to top protein sequence of NO12G00140.3 >NO12G00140.3-protein ID=NO12G00140.3-protein|Name=NO12G00140.3|organism=Nannochloropsis oceanica|type=polypeptide|length=213bpback to top protein sequence of NO12G00140.2 >NO12G00140.2-protein ID=NO12G00140.2-protein|Name=NO12G00140.2|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top protein sequence of NO12G00140.1 >NO12G00140.1-protein ID=NO12G00140.1-protein|Name=NO12G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=265bpback to top Synonyms
Publications
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